FC932266

Overview
NameFC932266
Unique NameFC932266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECOLU (Flavoprotein wrbA OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECOLI (Flavoprotein wrbA OS=Escherichia coli (strain K12) GN=wrbA PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECOLC (Flavoprotein wrbA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECOL6 (Flavoprotein wrbA OS=Escherichia coli O6 GN=wrbA PE=3 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECOL5 (Flavoprotein wrbA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECOK1 (Flavoprotein wrbA OS=Escherichia coli O1:K1 / APEC GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECOHS (Flavoprotein wrbA OS=Escherichia coli O9:H4 (strain HS) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECODH (Flavoprotein wrbA OS=Escherichia coli (strain K12 / DH10B) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECOBW (Flavoprotein wrbA OS=Escherichia coli (strain K12 / BW2952) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_ECO8A (Flavoprotein wrbA OS=Escherichia coli O8 (strain IAI1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 2 
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+  KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
The following BLAST results are available for this feature:
BLAST of FC932266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_ECOLU9.885e-4445.73Flavoprotein wrbA OS=Escherichia coli O17:K52:H18 ... [more]
WRBA_ECOLI9.885e-4445.73Flavoprotein wrbA OS=Escherichia coli (strain K12)... [more]
WRBA_ECOLC9.885e-4445.73Flavoprotein wrbA OS=Escherichia coli (strain ATCC... [more]
WRBA_ECOL69.885e-4445.73Flavoprotein wrbA OS=Escherichia coli O6 GN=wrbA P... [more]
WRBA_ECOL59.885e-4445.73Flavoprotein wrbA OS=Escherichia coli O6:K15:H31 (... [more]
WRBA_ECOK19.885e-4445.73Flavoprotein wrbA OS=Escherichia coli O1:K1 / APEC... [more]
WRBA_ECOHS9.885e-4445.73Flavoprotein wrbA OS=Escherichia coli O9:H4 (strai... [more]
WRBA_ECODH9.885e-4445.73Flavoprotein wrbA OS=Escherichia coli (strain K12 ... [more]
WRBA_ECOBW9.885e-4445.73Flavoprotein wrbA OS=Escherichia coli (strain K12 ... [more]
WRBA_ECO8A9.885e-4445.73Flavoprotein wrbA OS=Escherichia coli O8 (strain I... [more]

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Properties
Property NameValue
Genbank descriptionC34206F05EF PostHarveN Citrus clementina cDNA clone C34206F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932266 ID=FC932266; Name=FC932266; organism=Citrus clementina; type=EST; length=702bp
GGAATCCATTTTTTCAAACTTTTTTTTTATATATAGAGAGAAAAGTAACA
GAGACTCGTCGAAGAAGACTCCTTAAGAGATGGCAACCAAAGTGTATATT
GTGTACTATTCCATGTATGGACATGTAGAGAAACTGGCAGAAGAGATAAA
GAAAGGAGCTTCATCTGTTGAGGGTGTTGAAGCCAAATTATGGCAGGTCC
CTGAGACACTACCTGAGGAGGTACTTGGTAAGATGAGTGCACCACCAAAG
AGTGATGTACCTATTATTACCCCCAACGAACTTGCTGAGGCTGATGGGTT
TGTTTTTGGCTCCCCAACAAGATTTGGAATGATGGCTGCTCAATTTAAAG
CATTTTTAGATGCTACTGGTGGTCTATGGAGGACACAACAGCTCGCTGGC
AAACCTGCTGGGATGTTCTACAGCACTGGGTCACAAGGTGGTGGACAAGA
GACTACAGCGTTGACGGCAATTACTCAGCTTGTTCACCATGGGATGATAT
TTGTTCCTATTGGATACACATTTGGTGCTGGCATGTTTGAGATGGAGAAA
GTGAAAGGTGGAAGTCCCTACGGTGCAGGAACTTTTGCTGGAGATGGCTC
GAGACAGCCAACTGAGCTTGAGTTGGAGCAAGCTTTCCACCAGGGAAAAC
ACATTGCGGGCATTTGCAAGAAGCTGAAGGGAAGTGCTTAAATATTTCAA
TT
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