FC932267

Overview
NameFC932267
Unique NameFC932267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.000e-64
Identity = 124/180 (68.89%), Postives = 140/180 (77.78%), Query Frame = 1
Query:  181 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG--------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            KDY +PPPAPL +  EL  WS YRA IAEFIAT LFLYI+V TV+G        V  ++  CS VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ Y++ QCLGAICG G+VKGF  +  Y R  GGAN ++ GY+KG GLGAEIIGTFVLVYTVFSATD K
Sbjct:   18 KDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQ-SSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPK 196          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.114e-63
Identity = 124/187 (66.31%), Postives = 140/187 (74.87%), Query Frame = 1
Query:  160 AAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            AA   +GKDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYI+V TV+G            +  C  VG+ GIAWAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARK+SL RAL Y+V QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD K
Sbjct:    7 AAAAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSA-FYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPK 192          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.900e-63
Identity = 125/189 (66.14%), Postives = 140/189 (74.07%), Query Frame = 1
Query:  154 GTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            G AA     KDY +PPPAPL +  EL SWS YRA IAEFIAT LFLYI+V TV+G           ++  C  VG+ GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ Y+V QCLGAICG G+VK F  A  + R  GGAN +A GY+KG GL AEIIGTFVLVYTVFSATD K
Sbjct:   10 GGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSA-YFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPK 197          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 1.900e-63
Identity = 124/180 (68.89%), Postives = 138/180 (76.67%), Query Frame = 1
Query:  181 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            KDY +PPPAPL +  EL SWS YRA IAEFIAT LFLYI+V TV+G           ++  C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL Y+V QCLGAICG G+VK F  A  + R  GGAN +A GY++G GLGAEIIGTFVLVYTVFSATD K
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSA-YFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPK 197          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.241e-63
Identity = 125/189 (66.14%), Postives = 138/189 (73.02%), Query Frame = 1
Query:  154 GTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            G  A     KDY +PPPAPL +  EL  WS YRA IAEFIAT LFLYI+V TV+G            +  C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD K
Sbjct:   10 GPEAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSA-YYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPK 197          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.241e-63
Identity = 122/182 (67.03%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  181 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV----------VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            KDY +PPPAPL +  EL SWS YRA IAEFIAT LFLY++V TV+G             ++  C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YMV QCLGA+CG G+VK F  A  + R  GGAN +A GY++G GLGAEI+GTFVLVYTVFSATD K
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSA-YFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPK 199          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.233e-63
Identity = 125/189 (66.14%), Postives = 138/189 (73.02%), Query Frame = 1
Query:  154 GTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            G  A     KDY +PPPAPL +  EL  WS YRA IAEFIAT LFLYI+V TV+G            +  C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD K
Sbjct:    9 GPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSA-YYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPK 196          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.528e-63
Identity = 123/178 (69.10%), Postives = 139/178 (78.09%), Query Frame = 1
Query:  181 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            +DY +PPPAP  +  ELK WSFYRA IAEF+AT LFLYI+VLTV+G  ++S+T      C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G VK F  +  Y R  GGAN +A GY+ G GL AEIIGTFVLVYTVFSATD K
Sbjct:   16 RDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQ-SSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPK 192          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 7.220e-63
Identity = 123/174 (70.69%), Postives = 137/174 (78.74%), Query Frame = 1
Query:  181 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG--VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            KDY +PPPAPLF+ GEL+ WSFYRA IAEFIAT LFLYI+V TV+G  V  S  +C  VG  GIAWAFGGMIF+LVYCTAGISGGHINPAVT GL LARK+S+ RA+ Y+V QCLG I G G+VKG M   QY    GGAN+VA GY+ G  LGAEIIGTFVLVYTVFSATD K
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPK 187          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 9.429e-63
Identity = 123/178 (69.10%), Postives = 137/178 (76.97%), Query Frame = 1
Query:  181 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            +DY +PPP P F+  EL  WS YRA IAEF+AT LFLYI+VLTV+G  ++S+TK     C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G VK F  +  Y R  GGAN +A GY  G GL AEIIGTFVLVYTVFSATD K
Sbjct:   14 RDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQ-SSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPK 190          
The following BLAST results are available for this feature:
BLAST of FC932267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
PIP22_ORYSJ5.000e-6468.89Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE1.114e-6366.31Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP21_ORYSJ1.900e-6366.14Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP21_MAIZE1.900e-6368.89Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP23_MAIZE3.241e-6366.14Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_MAIZE3.241e-6367.03Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP24_MAIZE4.233e-6366.14Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP21_ARATH5.528e-6369.10Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP26_ORYSJ7.220e-6370.69Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP22_ARATH9.429e-6369.10Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]

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Properties
Property NameValue
Genbank descriptionC34206F06EF PostHarveN Citrus clementina cDNA clone C34206F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932267 ID=FC932267; Name=FC932267; organism=Citrus clementina; type=EST; length=696bp
GACTCATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAAGTGC
TTCTTATTGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTA
AAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCG
ATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCC
ACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACA
GGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCC
GTACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGT
CGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCG
TTTACTGCACAGCTGGCATCTCGGGTGGCCATATCAACCCGGCGGTGACA
CTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTA
CATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGG
GTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTC
GTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGG
TACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAA
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