FC932267

Overview
NameFC932267
Unique NameFC932267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  241 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 690
            + +R  +AEF+ TF  + I + + MG         T     IA+ FG ++  L      +SG HINPAVT+GL +   +S+ +  FY+V QC+GAI GA ++K    +   G L  G   +    T G G+  E + TF+LV+ V    D
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGL--GVTGIDPRLTAGQGVMIEALITFILVFVVHGVCD 164          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 52/157 (33.12%), Postives = 77/157 (49.04%), Query Frame = 1
Query:  226 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            E +S+SF+RA  AEF  T  +++  +   +             +  IA AFG ++  +V     +SG HINPAVT    +  ++SL RA+FY+  Q LGA+ GA V+ G   A   G LA   N +  G + G     EI  T   V  +F+  D +
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASL-----KWAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDER 152          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16
Identity = 55/157 (35.03%), Postives = 81/157 (51.59%), Query Frame = 1
Query:  226 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            EL+S +F RA +AEF+AT LF++  + + +         S   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----QWASSPPSVLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLA--VNALHNNATAGQAVTVELFLTMQLVLCIFASTDER 152          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  250 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAK 696
            +A +AEFI+T +F++  V + +   K          G+  +A   G  +FV V   A ISGGH+NPAVT GL L  ++++   +FY + Q LGAI GA +V+   G         G           +G+  EII TF LVYTV+ +A D K
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGAF-------EGVVMEIIVTFGLVYTVYATAADPK 164          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 57/162 (35.19%), Postives = 83/162 (51.23%), Query Frame = 1
Query:  220 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAK 696
            PGEL      +A +AEFI+T +F++    + M   K       +  G+   + A    +FV V   A ISGGH+NPAVT G F+   +SL +AL Y V Q LG++    ++K   G    G  +  A V A      + +  E++ TF LVYTV+ +A D K
Sbjct:   11 PGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAM-----NAVVLEMVMTFGLVYTVYATAVDPK 167          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15
Identity = 59/168 (35.12%), Postives = 84/168 (50.00%), Query Frame = 1
Query:  214 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAK 696
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPK 165          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15
Identity = 59/168 (35.12%), Postives = 84/168 (50.00%), Query Frame = 1
Query:  214 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAK 696
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPK 165          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 53/157 (33.76%), Postives = 76/157 (48.41%), Query Frame = 1
Query:  226 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 696
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ YM  Q LGA+ GA V+     A   G LA   N +  G + G     EI  T   V  +F+  D +
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDER 152          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 60/161 (37.27%), Postives = 91/161 (56.52%), Query Frame = 1
Query:  223 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAK 696
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   +FY V Q LGA   A ++ GF+  G+    A   + VA G ++ +G+  E++ TF LVYTV+ +A D K
Sbjct:   10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGK----AIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPK 164          
BLAST of FC932267 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 53/156 (33.97%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  250 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAK 696
            +AG+AEFI+TF+F++    + +   K  ++   +  G+   + A    +FV V   A ISGGH+NPAVT G F+   ++L R + Y++ Q LG+I  + ++               ++V A G ++G G+G     EI+ TF LVYTV+ +A D K
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLV----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPK 166          
The following BLAST results are available for this feature:
BLAST of FC932267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
AQP_AEDAE5.070e-1634.00Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
MIP_RANPI6.621e-1633.12Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP2_MOUSE8.648e-1635.03Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
TIP22_ORYSJ1.927e-1536.18Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE2.516e-1535.19Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP2_TOBAC4.292e-1535.12Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC4.292e-1535.12Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
MIP_RABIT5.605e-1533.76Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
TIP21_MAIZE9.561e-1537.27Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP1_MEDTR9.561e-1533.97Probable aquaporin TIP-type OS=Medicago truncatula... [more]

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Properties
Property NameValue
Genbank descriptionC34206F06EF PostHarveN Citrus clementina cDNA clone C34206F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932267 ID=FC932267; Name=FC932267; organism=Citrus clementina; type=EST; length=696bp
GACTCATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAAGTGC
TTCTTATTGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTA
AAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCG
ATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCC
ACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACA
GGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCC
GTACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGT
CGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCG
TTTACTGCACAGCTGGCATCTCGGGTGGCCATATCAACCCGGCGGTGACA
CTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTA
CATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGG
GTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTC
GTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGG
TACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAA
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