FC932273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_LACLA (Anthranilate synthase component II OS=Lactococcus lactis subsp. lactis GN=trpG PE=4 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLV 642 I++IDNYDSFTYNL QY+G L V +ND+ ++ + K ++ SPGPG P D+G + + P+ G+C+G Q I E FGGK+ R VMHGK+S V Sbjct: 2 ILIIDNYDSFTYNLVQYVGVLT-DVAVVKNDDDSLGNMAEKAD-ALIFSPGPGWPADAGKMETLIQQFAGQKPILGICLGFQAIVEVFGGKL-RLAHQVMHGKNSQV 105
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_HALVO (Anthranilate synthase component II OS=Halobacterium volcanii GN=trpG PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFEVY----RNDELTVEELKRKNPRGVLISPGPGTPQ---DSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG-----EDGLLAG 681 ++V+DN+DSFTYNL +Y E E R +++E++ +P ++ISPGPG P+ D G++ + EL +P GVC+GL+ A+GG I +P +HGK+ V +D G EDG AG Sbjct: 4 LVVVDNFDSFTYNLVEYFSEQTVEGEPLDIEVRKTTASLDEIRDLDPDAIVISPGPGHPKNDRDVGVTNDVLTELSTEIPTLGVCLGLEAAVYAYGGTIGHAP-DAIHGKAFPVDHDGAGVFAGLEDGFPAG 134
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_VIBPA (Anthranilate synthase component II OS=Vibrio parahaemolyticus GN=trpG PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND------ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDE 654 I+ IDN+DSFTYNL LG+ ++YRN E + EL+ NP VL+SPGPG P ++G + + + VP+ G+C+G Q I EA+GG + + ++HGK S++ + + Sbjct: 4 IVFIDNFDSFTYNLVDQFRSLGHSVKIYRNHIPAETIEQAINELE--NPV-VLLSPGPGAPSEAGSMPELIQRMKGKVPMIGICLGHQAIVEAYGGTVAGAG-EIIHGKVSMMEHQD 116
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_VIBCH (Anthranilate synthase component II OS=Vibrio cholerae GN=trpG PE=4 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15 Identity = 49/128 (38.28%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRN----DELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLXNP 693 I+ IDN+DSFTYNL LG+ +YRN D + L+ NP V++SPGPG P ++G + + L VP+ G+C+G Q I EA+GG +V ++HGK S++ E + GL +P Sbjct: 4 ILFIDNFDSFTYNLVDQFRSLGHVVTIYRNNLSADAIEQALLQLDNPV-VVLSPGPGAPSETGCMPELLQRLKGKVPMIGICLGHQAIVEAYGG-VVAGAGEIIHGKVSMM---EHQNHAIYRGLPSP 126
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_METTH (Anthranilate synthase component II OS=Methanobacterium thermoautotrophicum GN=trpG PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15 Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGEL------GYHFEVYRNDELTVEELKRKNPRGVLISPGPGTP---QDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYD 651 I++IDNYDSFT+NL Q GE+ V RNDE + +L+ +P ++ISPGPG P D G+ + + E PL GVC+G Q I AFGG++ + +HGK V++D Sbjct: 4 ILIIDNYDSFTHNLYQLAGEILRDEGMDEEIMVLRNDEARISDLRALDPEKIIISPGPGNPSRRSDFGVCMDVIGEFTDR-PLLGVCLGHQGIFHAFGGRVDQGE--PVHGKIVEVFHD 119
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_HELPJ (Anthranilate synthase component II OS=Helicobacter pylori J99 GN=trpG PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15 Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND--ELTVEELKRKNPRGVL--ISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLV 642 I IDN+DSF+YNL + LGY VY+ND + L + P+ L ISPGPG P SG L+ + P+ GVC+GLQ + +++G KI+RS ++HGK++ + Sbjct: 3 IFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMGLMNEEPKTPLLFISPGPGNPNSSGNLLKIIAMAKKKFPILGVCLGLQALAQSYGAKIIRSK-EIVHGKATTI 112
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_SALTY (Anthranilate synthase component II OS=Salmonella typhimurium GN=trpD PE=1 SV=4) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 42/127 (33.07%), Postives = 75/127 (59.06%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLXNP 693 I+++DN DSFT+NL + G++ +YRN + ++ L +++SPGPG P ++G + + L +P+ G+C+G Q I EA+GG + ++ ++HGK+S + +D + + AGL NP Sbjct: 4 ILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG-EILHGKASSIEHDGQ---AMFAGLANP 126
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_HELPY (Anthranilate synthase component II OS=Helicobacter pylori GN=trpG PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND-------ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLV 642 I IDN+DSF+YNL + LGY VY+ND +L EE K + ISPGPG P SG L+ + P+ G+C+GLQ + +++G KI+RS ++HGK++ + Sbjct: 3 IFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPL---LFISPGPGNPNSSGNLLKIIAMAKKKFPILGICLGLQALAQSYGAKIIRSK-EIVHGKATAI 112
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_METTM (Anthranilate synthase component II OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpG PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 52/132 (39.39%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFE-----VYRNDELTVEELKRKNPRGVLISPGPGTP---QDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLXNP 693 I++IDNYDSFT+NL Q GE+ + V RNDE+ ++ ++ +P ++ISPGPG P +D GI + + E P+ GVC+G Q I FGG + +HGK S V++D G + L G+ NP Sbjct: 5 ILIIDNYDSFTHNLYQMAGEIMMEMDSADIMVVRNDEVDIDYVRGLDPERIIISPGPGNPIKREDFGICSEVIGEFTDR-PILGVCLGHQGIFHYFGGVVGYGE--PVHGKISEVFHD--GSE-LFRGVPNP 130
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_CORGL (Anthranilate synthase component 2 OS=Corynebacterium glutamicum GN=trpG PE=4 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKS-SLVYYDEKGEDGLLAGL 684 +++IDN+DSF YNL GY V+RN + VE + NP + +SPGPG P D+G + + +PL G+C+G Q + E GGK+ P G +HG + +++ D + + AGL Sbjct: 4 VVLIDNHDSFVYNLVDAFAVAGYKCTVFRNT-VPVETILAANPDLICLSPGPGYPADAGNMMALIERTLGQIPLLGICLGYQALIEYHGGKV--EPCGPVHGTTDNMILTDAGVQSPVFAGL 122 The following BLAST results are available for this feature:
BLAST of FC932273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932273 ID=FC932273; Name=FC932273; organism=Citrus clementina; type=EST; length=694bpback to top |