FC932273

Overview
NameFC932273
Unique NameFC932273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_HALSA (Anthranilate synthase component II OS=Halobacterium salinarium GN=trpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 44/121 (36.36%), Postives = 71/121 (58.68%), Query Frame = 1
Query:  322 IIVIDNYDSFTYNLCQYMG-----ELGYHFEVYRNDELTVEELKRKNPRGVLISPGPG---TPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 660
            ++V+DNYDSFTYNL +Y+      +      V +N   ++  ++  +P  V+ISPGPG   TP+D G++   +  + P VP  GVC+G++     +GG + R+    MHGK++ V +DE G
Sbjct:    3 VVVVDNYDSFTYNLVEYLSAQPRDDHAPDVTVLKNTA-SLAAVRAADPDAVVISPGPGHPDTPRDVGVTTDVLRAVSPRVPTLGVCLGMEAAVHEYGGTVGRA-AEPMHGKTTPVSHDETG 121          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_BUCBP (Anthranilate synthase component 2 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trpG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15
Identity = 43/127 (33.86%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLXNP 693
            I+++DN DSFTYNL   +    +   VYRN     + +++L +     +++SPGPG P ++G   Q ++EL   +P+ G+C+G Q I + +GG +  S   ++HG++SL+ +D K    +  G+ NP
Sbjct:    4 ILLLDNIDSFTYNLVDQLRSNFHQVFVYRNTVRKNIILKKLSKMINPILILSPGPGNPDNAGCMPQLLMELKGKLPIIGICLGHQAIVKMYGGHVGYSG-EILHGQASLINHDNK---AMFLGMSNP 126          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_BUCAP (Anthranilate synthase component 2 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trpG PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 39/113 (34.51%), Postives = 69/113 (61.06%), Query Frame = 1
Query:  322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYD 651
            I+++DN+DSFTYNL + +     +  +YRN       +  +K+     +++SPGP TP+++G  L  + ++   +P+ G+C+G Q I EA+GG I+     + HGK+SL+ +D
Sbjct:    4 ILLLDNFDSFTYNLVEQLRNKNSNVLIYRNTVDINTILNSIKKIRNPILMLSPGPSTPKNAGCMLNLIKKVKGEIPIVGICLGHQAIVEAYGG-IIGYAGEIFHGKASLINHD 115          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_ARCFU (Anthranilate synthase component 2 OS=Archaeoglobus fulgidus GN=trpG PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:  322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNP-RGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLXNP 693
            I+V+D  DSF YNL +Y+      F+  R  E     L RK    GV+ISPGPG P  S   L+ V ++G  VP+ GVC+G Q I E FGGK+ R  +  +HGK+SLV +D +   G+  G+ NP
Sbjct:    2 IVVVDCKDSFVYNLVEYISL----FDKVRVVEKESAGLLRKMSFDGVVISPGPGKPDRS---LEFVFKMG--VPVLGVCLGHQMIAEVFGGKVGR--VEPVHGKTSLVEHDGR---GIFKGVRNP 112          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_BUCAI (Anthranilate synthase component 2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trpG PE=4 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13
Identity = 40/113 (35.40%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYD 651
            I+++DN DSFTYNL + +     +  VYRN    ++    LK+     +++SPGP  P+ +G  L  + ++   +P+ G+C+G Q I EA+GG I+     + HGK+SL+ +D
Sbjct:    4 ILLLDNIDSFTYNLVEQLRNQKNNVLVYRNTVSIDIIFNSLKKLTHPILMLSPGPSLPKHAGCMLDLIKKVKGDIPIVGICLGHQAIVEAYGG-IIGYAGEIFHGKASLIRHD 115          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: PHNB_PSEAE (Anthranilate synthase component II, pyocyanin specific OS=Pseudomonas aeruginosa GN=phnB PE=4 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = 1
Query:  322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDEL--TVEE-LKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKI--VRSPLGVMHGKSSLVYYDEK 657
            I ++DN+DSFTYNL +    LG    V RND    T++  L       +++SPGPG P+D+G  L+ +      +P+ GVC+G Q +  A GG +   R PL   HGKS+ + +D++
Sbjct:    3 ITLLDNFDSFTYNLVEQFCLLGAEVRVMRNDTPLPTIQAALLADGCELLVLSPGPGRPEDAGCMLELLAWARGRLPVLGVCLGHQALALAAGGAVGEARKPL---HGKSTSLRFDQR 116          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPG_COCHE (Anthranilate synthase component 2 OS=Cochliobolus heterostrophus GN=TRP1 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 1
Query:  322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 660
            +I+IDNYDSFT+N+ QY+   G    VYRNDE+T++EL  K P  ++IS  P T ++        L        F  C    CI  ++GG +  +   ++HGK+  + +D KG
Sbjct:   26 VILIDNYDSFTWNVYQYLVFEGAFVTVYRNDEITLDELIAKKPTQLVISQVPDTRKEDVALAIEPLRTSVAKSPFSACAWESCIFYSYGGTVDVTG-QILHGKTCPLKHDGKG 137          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: TRPE_RHIME (Anthranilate synthase OS=Rhizobium meliloti GN=trpE(G) PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12
Identity = 41/113 (36.28%), Postives = 58/113 (51.33%), Query Frame = 1
Query:  322 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 660
            I+++D+ DSF + L  Y  + G      R   +  E   R  P  V++SPGPGTP+D              +P+FGVC+GLQ + EA+GG + R     MHGK S +   E G
Sbjct:  531 ILLVDHEDSFVHTLANYFRQTGASVTTVRTP-VAEEIFDRVKPDLVVLSPGPGTPKDFDCKATIKKARARDLPIFGVCLGLQALAEAYGGDL-RQLAIPMHGKPSRIRVLEPG 641          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: PABS_STRGR (Para-aminobenzoate synthase OS=Streptomyces griseus GN=pab PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11
Identity = 48/127 (37.80%), Postives = 67/127 (52.76%), Query Frame = 1
Query:  325 IVIDNYDSFTYNLCQYMGEL-GYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQ---DSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLXNP 693
            +++DNYDSFTYNL  Y+    G   EV RND+             V++SPGPGTP    D G+  +   E    +P+ GVC+G Q +  A G ++ R+P    HG++S V +D     GL  GL  P
Sbjct:    4 LLVDNYDSFTYNLFHYLSRANGREPEVIRNDDPAWRPGLLDAFDNVVLSPGPGTPHRPADFGLCARIAEE--GRLPVLGVCLGHQGMALAHGARVGRAP-EPRHGRTSAVRHD---GTGLFEGLPQP 124          
BLAST of FC932273 vs. ExPASy Swiss-Prot
Match: GUAA_AQUAE (GMP synthase [glutamine-hydrolyzing] OS=Aquifex aeolicus GN=guaA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:  313 KNPIIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISL--QTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRS 606
            + PI+V++    +   + + + ELG + E+   D   VEE+K+KNP G++ S GP +    G  L  + + ELG  VP+ G+C GLQ I    GGK+VRS
Sbjct:    3 RRPILVVNFGSQYVQLIARRVRELGVYSEIVHWDT-PVEEIKKKNPYGIIFSGGPASVYAEGAPLPDKRIYELG--VPILGICYGLQVITHQLGGKVVRS 99          
The following BLAST results are available for this feature:
BLAST of FC932273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TRPG_HALSA5.558e-1536.36Anthranilate synthase component II OS=Halobacteriu... [more]
TRPG_BUCBP7.259e-1533.86Anthranilate synthase component 2 OS=Buchnera aphi... [more]
TRPG_BUCAP1.617e-1434.51Anthranilate synthase component 2 OS=Buchnera aphi... [more]
TRPG_ARCFU6.145e-1443.20Anthranilate synthase component 2 OS=Archaeoglobus... [more]
TRPG_BUCAI1.048e-1335.40Anthranilate synthase component 2 OS=Buchnera aphi... [more]
PHNB_PSEAE1.514e-1237.61Anthranilate synthase component II, pyocyanin spec... [more]
TRPG_COCHE5.752e-1236.28Anthranilate synthase component 2 OS=Cochliobolus ... [more]
TRPE_RHIME9.811e-1236.28Anthranilate synthase OS=Rhizobium meliloti GN=trp... [more]
PABS_STRGR1.674e-1137.80Para-aminobenzoate synthase OS=Streptomyces griseu... [more]
GUAA_AQUAE8.306e-1138.00GMP synthase [glutamine-hydrolyzing] OS=Aquifex ae... [more]

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Properties
Property NameValue
Genbank descriptionC34206G05EF PostHarveN Citrus clementina cDNA clone C34206G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932273 ID=FC932273; Name=FC932273; organism=Citrus clementina; type=EST; length=694bp
GGCTCAGTTTTTTGTTGTCTTTGAAGTTAAAAAGCGCCTTAGTTTCATAT
TCTCAGTCTCGCTCTCTCCTCTCTAGCAACAATGGCGGCAATGGTTTCGC
AGTCAACTCTCATTCAAACAAAACCGTCTCTCTCTTTAAAACCCTCTCAA
CGGTTTCGACCCAATCGTCTCTCTGCAATCCCTGAGCCTTCTCCAGGGCT
GAGGTTGGGGGCTAAGAAGGGAAATGGGGCTGTAAAGTTGTCAATGGCTG
TGGCAGAGGCAGTACCCATTTCGAAGTCTTTATATTTGGATGATAAGAAG
AGCAAGAATAATAAAAATCCCATCATTGTTATTGATAATTATGATAGTTT
CACTTACAATCTCTGCCAGTATATGGGCGAGCTTGGTTATCACTTTGAGG
TTTATCGGAATGATGAATTAACTGTGGAGGAGTTAAAACGGAAAAATCCT
AGAGGAGTGCTTATATCCCCTGGGCCGGGCACACCTCAAGATTCTGGAAT
ATCATTGCAGACTGTTTTGGAACTTGGACCTACTGTGCCTCTGTTTGGTG
TTTGTATGGGTTTGCAGTGCATTGGAGAGGCTTTTGGAGGGAAGATTGTG
CGTTCTCCGCTTGGTGTCATGCATGGAAAAAGTTCTCTTGTGTATTATGA
TGAGAAAGGGGAGGATGGCTTGCTTGCTGGACTATNCAATCCTT
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