FC932275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEH1_YEAST (Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SEH1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.772e-20 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 91 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS--GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA 480 Q ++GH+D VHDV D+YG+ +AT SSD IK+ + +TS S H ++ + WA P++G I+AS S+D TV +W+E E W K D K S+ S+ +AP LGL LAC +DG + ++ A Sbjct: 2 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 139
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEH1_SCHPO (Nucleoporin seh1 OS=Schizosaccharomyces pombe GN=seh1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16 Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKG--AVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN----EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG 492 I+T H+D V+DV D+YG+R+ + S+D +K+ ++T G ++ VAWAHP FG +LA CS D V I++E N W++ D +S+V I + P + G LA S+D + ++ A G Sbjct: 9 IQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADATLRIYEAMEPG 146
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: CIAO1_AEDAE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Aedes aegypti GN=Ciao1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.006e-15 Identity = 60/187 (32.09%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK 654 + GH T+ DVA G+ LA+AS D ++ I + + A L GH+ V V+W+ K GS+LA+CS D +V +W+ +E+ V H V ++W PHE LA S D I ++ AD W + +H V S+S+ GSG +L S D TVK+W+ Sbjct: 55 LSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWS--KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHE--DILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFD---------GSG-----NRLASCSDDQTVKIWQ 223 HSP 2 Score: 70.4774 bits (171), Expect = 8.813e-12 Identity = 46/142 (32.39%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 232 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK 654 L+GH+G W W HPK G++LA+C D T+ IW E S W+ V D H ++ + W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S G+L+ + CS D +V VW+ Sbjct: 10 LTGHRGRAWGAGW-HPK-GNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSP--CGQYLASASFDATVAIWDKKS-GEFECNATLEGHENEVKSVSWSKS---GSLLAT---------CSR--DKSVWVWE 132
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: CIO1B_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-B OS=Salmo salar GN=ciao1b PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.227e-14 Identity = 61/186 (32.80%), Postives = 84/186 (45.16%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK 654 ++ GH+ TV VA G LA+AS D + I N+ + L L GH+ V VAWA G++LA+CS D +V IW+ NE+ V H V + W P + LA S D N+ V+ D W+ + H TS W + P Q+L S D TVK+WK Sbjct: 56 LQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA--PSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQ--ELLASCSYDNNVCVY-KEEDDDWECRATLEGH----TSTVWGLTFDPSG----------QRLASCSDDCTVKIWK 222
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: CIAO1_CULQU (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Culex quinquefasciatus GN=Ciao1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.227e-14 Identity = 56/192 (29.17%), Postives = 90/192 (46.88%), Query Frame = 1 Query: 82 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK 654 +P + GH T+ DVA G+ LA+AS D ++ I + + A L GH+ V V+W+ K G++LA+CS D +V IW+ +E+ V H V ++W P+E LA S D I ++ AD W + +H V S+++ S + +L S D TV++W+ Sbjct: 50 VPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWS--KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNE--DVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGS--------------RLASCSDDQTVRIWQ 223 HSP 2 Score: 68.5514 bits (166), Expect = 3.349e-11 Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 232 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK 654 LSGH+G VW W HP+ +LA+C D T+ IW + + W+ V D H ++ + W+P G LA S D ++++ R+ G ++ + + H V SVSW+ S GAL+ + CS D +V +W+ Sbjct: 10 LSGHRGRVWGAGW-HPR-DPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWSP--CGRFLASASFDATVAIWDRRS-GEFECNATLEGHENEVKSVSWSKS---GALLAT---------CSR--DKSVWIWE 132
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: CIAO1_DROWI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 55/188 (29.26%), Postives = 85/188 (45.21%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKA 657 + GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+ K G +LA+CS D +V IW+ +E+ V H V + W H LA S D I +F A D WD + +H V S+ + A G ++L S D T+K+W+A Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDF---DADG-----------ERLVSCSDDTTLKIWRA 223 HSP 2 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 51/183 (27.87%), Postives = 83/183 (45.36%), Query Frame = 1 Query: 106 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVW 651 GH+ + VA G A+ D +I+I + GN+ S GHK + E+ W+ G LAS SFD T IW + +S E+ + E H++ V S+ W+ + G LA S D ++ ++ D ++ + + H V V W P+ + L S DNT+K++ Sbjct: 12 GHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRWS--PCGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS--KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--------------EILASASYDNTIKMF 175
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 55/188 (29.26%), Postives = 83/188 (44.15%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTAR-ADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKA 657 + GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+ + G +LA+CS D +V IW+ +E+ V H V + W H LA S D I +F D WD + +H TS W G F ++L S D T+K+WKA Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSH----TSTVW----------GIDFDADGERLVSCSDDTTIKIWKA 223 HSP 2 Score: 68.1662 bits (165), Expect = 4.374e-11 Identity = 52/183 (28.42%), Postives = 81/183 (44.26%), Query Frame = 1 Query: 106 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVW 651 GH+ + VA G A+ D +I+I + NT LS GHK + E+ W+ G LAS SFD T IW + +S E+ + E H++ V S+ W+ G LA S D ++ ++ D ++ + + H V V W P+ L S DNT+K++ Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWS--PCGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--------------DVLASASYDNTIKMF 175
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: CIAO1_DANRE (Probable cytosolic iron-sulfur protein assembly protein ciao1 OS=Danio rerio GN=ciao1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 58/186 (31.18%), Postives = 83/186 (44.62%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK 654 + GH+ TV VA GK LA+AS D + I + + L L GH+ V VAWA GS+LA+CS D +V IW+ +E+ V H V + W P + LA S D I ++ D W+ + H V S+++ P ++L S D TVK+WK Sbjct: 56 LSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWA--PSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQ--ELLASASYDNKICIY-KEEDDDWECRATLEGHESTVWSLTFDPEG--------------RRLASCSDDRTVKIWK 222
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: CIO1A_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-A OS=Salmo salar GN=ciao1a PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12 Identity = 59/186 (31.72%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK 654 ++ GH+ V VA G LA+AS D + I N+ + L L GH+ V VAWA G+ LA+CS D +V IW+ +E+ V H V + W P + LA S D N+ V+ D W+ + H TS W + P Q+L S D TVK+WK Sbjct: 56 LQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA--PSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQ--ELLASCSYDNNVCVY-KEEDDDWECRATLEGH----TSTVWGLTFDPSG----------QRLASCSDDRTVKIWK 222
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: CIAO1_DROER (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 54/188 (28.72%), Postives = 83/188 (44.15%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKA 657 + GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+ + G +LA+CS D +V IW+ +E+ V H V + W H LA S D I ++ D WD + +H TS W G F ++L S D T+K+WKA Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW--HPTKEVLASASYDNTIKMYAEDPVDNDWDCTATLTSH----TSTIW----------GIDFDADGERLVSCSDDTTIKIWKA 223 The following BLAST results are available for this feature:
BLAST of FC932275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932275 ID=FC932275; Name=FC932275; organism=Citrus clementina; type=EST; length=657bpback to top |