FC932276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: GLYR1_XENTR (Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.890e-27 Identity = 65/208 (31.25%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 79 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLDVRKWMD 699 I P+ +IG++G+G+MG+ + S LL G++VTV+ RT+ K +GA + +P +V + + F+ V P+ + + L P G++ G+ PG YVD ++ P E+ +V + ++APVSG + DG L I AAGD V + + F +GK + F+GE G + +V G+ + ++EG+ A G + +D Sbjct: 244 IIPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAHMGRTPAEVVSTCDITFACVADPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDPETVAELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDQGVYEDCSSCFLAMGKTSFFLGEVGNAARMMLILNMVQGSFMATIAEGMTLAQVTGQSQQTLLD 451
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: GLYR1_PONAB (Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 65/208 (31.25%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 79 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLDVRKWMD 699 ITP+ +IG++G+G+MG+ + S LL G++VTV+ RT+ K +GA L +P +V + + F+ V P+ + + L P G++ G+ P YVD ++ E+ +V + ++APVSG + DG L I AAGD + + + F+ +GK + F+GE G + +V G+ + ++EGL A G + +D Sbjct: 263 ITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWDRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPRKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLD 470
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: GLYR1_MOUSE (Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 66/208 (31.73%), Postives = 113/208 (54.33%), Query Frame = 1 Query: 79 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLDVRKWMD 699 ITP+ +IG++G+G+MG+ + S LL G++VTV+ RT+ K +GA L +P +V + + F+ V P+ + + L P G++ G+ PG YVD ++ E+ +V + ++APVSG + DG L I AAGD + + + F+ +GK + F+GE G + +V G+ + ++EGL A G + +D Sbjct: 262 ITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEK------EGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLD 463
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: 3HIDH_DICDI (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 63/204 (30.88%), Postives = 108/204 (52.94%), Query Frame = 1 Query: 82 TPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKP-TFMGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLDVRK 690 T S +G+IG+G MG A L+ G+++ V+ + +L+ +GA +A SP +VAK + V+ +M+ V+++ +GI + PG + +D+++ PA ARE+ +A++ +D PVSGG GA G L G E +GK G+ G GQ K+ N +V+G +++ +SE + K G+D +K Sbjct: 19 TSSSKTVGFIGLGNMGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMDPKK 222
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: GLYR1_AEDAE (Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti GN=AAEL006684 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 66/201 (32.84%), Postives = 107/201 (53.23%), Query Frame = 1 Query: 79 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGL 678 I S + G++G+G+MG M LL++G+SV V+ RT++K + Q GA +A +P DV + + V FS V PQ + + G++S G YV+ T P + +I + K ++A + G A +G L I AAG+ + + FE + + +F MG+ G + Q++ G L G++EGL AD+AGL Sbjct: 269 IQASNLKFGFLGLGIMGCGMVKNLLNSGHSVVVWNRTATKCRKFQEAGAEVADTPSDVIEMTDVTFSCVADPQVAKELVFGNCGVMSANLVGKGYVEMTGVDPETSHDIAEQIIAKGGRYLEAQIQGSKNQAEEGTLIILAAGERLLFEECQTCFEAISRNSFYMGDVGNATKMNLVLQMISGVMLAGIAEGLALADRAGL 469
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: MMSB_PSEAE (3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa GN=mmsB PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24 Identity = 69/197 (35.03%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 94 TRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLD 681 T I ++G+G MG MA+ LL AG+ V V+ L L QGA A S + + VV SM+ Q V S+ L DG+++ + + +D ++ P AR++ + A K +DAPVSGG GAR G L+ G + P+ E +G+ F G+ G GQ KI N +++G + G +E L K GLD Sbjct: 2 TDIAFLGLGNMGGPMAANLLKAGHRVNVFDLQPKAVLGLVEQGAQGADSALQCCEGAEVVISMLPAGQHVESLYLGDDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLD 198
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: GLYR1_ANOGA (Putative oxidoreductase GLYR1 homolog OS=Anopheles gambiae GN=AGAP009949 PE=3 SV=5) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 60/201 (29.85%), Postives = 105/201 (52.24%), Query Frame = 1 Query: 79 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGL 678 I S+ + G++G+GVMG + L+ +G+SV V+ R++ K + Q GA +A +P DV + + V +S V PQ + + G++S G YV+ T P + +I + K ++A + G A +G L I A+GD + + FE + + +F +G+ G + Q++ G L G++E + AD+AGL Sbjct: 276 IKASQLKFGFLGLGVMGCGIVKNLIKSGHSVVVWNRSAHKCRKFQEVGAEVADTPSDVVEMTDVTYSCVSDPQVAKDMVFGNCGVMSANLAGKGYVEMTGVDPETSNDINEAIISKGGRYLEAQIQGSKNQAEEGTLIILASGDRLLFEECQSCFEAISRNSFYLGDVGNATKMNLILQMISGITLAGVAEAMALADRAGL 476
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: 3HIDH_MOUSE (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22 Identity = 58/199 (29.15%), Postives = 105/199 (52.76%), Query Frame = 1 Query: 88 SKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG-KPTFMGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLD 681 SKT +G+IG+G MGN MA L+ GY + +Y + + G +A+SP +VA+ + + +M+ + + + +GI+ + G++ +D+++ P++++E+ K + +DAPVSGG AR G L G L E +G + G G GQS KI N +++ +++G +E + ++GLD Sbjct: 37 SKTPVGFIGLGNMGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIITMLPSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLD 235
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: 3HIDH_RAT (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 58/199 (29.15%), Postives = 104/199 (52.26%), Query Frame = 1 Query: 88 SKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLD 681 SKT +G+IG+G MGN MA L+ GY + +Y + + G +A+SP DVA+ + + +M+ + + + +GI+ + G++ +D+++ P++++E+ K + +DAPVSGG AR G L G L +G + G G GQS KI N +++ +++G +E + ++GLD Sbjct: 37 SKTPVGFIGLGNMGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIITMLPSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLD 235
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: 3HIDH_PONAB (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii GN=HIBADH PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 59/199 (29.65%), Postives = 101/199 (50.75%), Query Frame = 1 Query: 88 SKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG-KPTFMGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLD 681 SKT +G+IG+G MGN MA L+ GY + +Y + Q G + +SP DVA+ + + +M+ T + +GI+ + G++ +D+++ PA+++E+ K + +DAPVSGG AR G L G L +G + G G GQ+ KI N +++ +++G +E + + GLD Sbjct: 38 SKTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLD 236 The following BLAST results are available for this feature:
BLAST of FC932276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932276 ID=FC932276; Name=FC932276; organism=Citrus clementina; type=EST; length=700bpback to top |