FC932276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: 3HIDH_CAEEL (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=B0250.5 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17 Identity = 52/197 (26.40%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 103 GWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLA-IFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLDVR 687 G+IG+G MG MA L+ G + VY + + +++G +AA P D+A +S + +++ + V+++ GI + PG + +D+++ ++ E+ + A +DAP+SGG GA+ L + AG+ A + + ++GK +G G G + KI N +++G ++ ++E + GLD + Sbjct: 5 GFIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVLPSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGVTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGISMGLDAK 201
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: YIHU_SHIFL (Uncharacterized oxidoreductase yihU OS=Shigella flexneri GN=yihU PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15 Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 1 Query: 100 IGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIAN 609 I +IG+G MG+ MAS LL G+ + V+ + L +GAT AA+P AK + + +M+ VR++ +G+ GL+ A+ +D ++ HP ++ + K +D PV A G L + A G + V+ TP+ +G G G G K+ N Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLIN 174
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: YIHU_ECOLI (Uncharacterized oxidoreductase yihU OS=Escherichia coli (strain K12) GN=yihU PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15 Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 1 Query: 100 IGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIAN 609 I +IG+G MG+ MAS LL G+ + V+ + L +GAT AA+P AK + + +M+ VR++ +G+ GL+ A+ +D ++ HP ++ + K +D PV A G L + A G + V+ TP+ +G G G G K+ N Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLIN 174
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: YGBJ_ECOLI (Uncharacterized oxidoreductase ygbJ OS=Escherichia coli (strain K12) GN=ygbJ PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14 Identity = 56/202 (27.72%), Postives = 97/202 (48.02%), Query Frame = 1 Query: 82 TPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGAT-LAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFE-VLGKPTFMG-EAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGL 678 T S+ +G +G+G MG A + AG S S+ L+ GA ++ + A+ + +V V+ + G+ L PG + +++ A A+EI D +DAPVSGG + A +G++ + A+G + L P+ E V GK +G E G G + KI +Q++ G ++ +E + A +AG+ Sbjct: 3 TGSEFHVGIVGLGSMGMGAALSYVRAGLSTWGADLNSNACATLKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGI 204
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: Y770_MYCTU (Uncharacterized oxidoreductase Rv0770/MT0794 OS=Mycobacterium tuberculosis GN=Rv0770 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13 Identity = 56/201 (27.86%), Postives = 88/201 (43.78%), Query Frame = 1 Query: 85 PSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWL-TPLFEVLGKPTFMGEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLDV 684 P R+G+IG+G G MA RLL +TV+ GAT AAS DVA++ + ++ Q V S+ +G+ + PG + ++ A ++ + + + VDAPVSGG A G+LA+ D Q + P GE G G K+A ++ + +E A+ GLD+ Sbjct: 5 PETPRLGYIGLGNQGAPMAKRLLDWPGGLTVFDVRVEAMAPFVEGGATAAASVSDVAEADIISITVFDDAQ-VSSVITADNGLATHAKPGTIVAIHSTIADTTAVDLAEKLKPQGIHIVDAPVSGGAAAAAKGELAVMVGADDEAFQRIKEPFSRWASLLIHAGEPGAGTRMKLARNMLTFVSYAAAAEAQRLAEACGLDL 204
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: YIHU_SALTY (Uncharacterized oxidoreductase yihU OS=Salmonella typhimurium GN=yihU PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12 Identity = 53/195 (27.18%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 100 IGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIANQIV-VGANLLGLSEGLVFADKAGL 678 I +IG+G MG+ MAS LL G+ ++V+ +L +GA A+SP + V +M+ VRS+ G+ L+ A+ +D ++ HP + + K +D P+ A G L + A G + V+ TP+ +G G G G K+ N + + N L +E V + GL Sbjct: 4 IAFIGLGQMGSPMASNLLKQGHQLSVFDVNPDAVQRLVDKGAQPASSPAQATIGAEFVITMLPNGDLVRSVLFGEQGVCETLSREALVIDMSTIHPLQTDNLIADMQSKGFSMMDVPIGRTSDNAITGTLLLLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALGL 197
BLAST of FC932276 vs. ExPASy Swiss-Prot
Match: Y1010_HAEIN (Uncharacterized oxidoreductase HI1010 OS=Haemophilus influenzae GN=HI1010 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 49/193 (25.39%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 109 IGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGA-TLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFM--GEAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGL 678 IG+G MG A ++AG + +L++ GA +AA+ +D A V +V ++ +GI L G + +++ A+ I + E +DAPVSGG A G++ + A+G + L P+ + + E G G + KI +Q++ G ++ +E + A KAG+ Sbjct: 11 IGLGSMGMGAAVSCINAGLTTYGIDLNPVALEKLKAAGAKAVAANGYDFAHELDAVVILVVNAAQANAVLFGENGIAKKLKAGTAVMVSSTMAAQDAQIISQKLTELGLIMLDAPVSGGAAKALKGEMTVMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIVHQLLAGVHIAAGAEAMALASKAGI 203 The following BLAST results are available for this feature:
BLAST of FC932276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932276 ID=FC932276; Name=FC932276; organism=Citrus clementina; type=EST; length=700bpback to top |