FC932282

Overview
NameFC932282
Unique NameFC932282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 57/199 (28.64%), Postives = 87/199 (43.72%), Query Frame = 2 
Query:  101 FGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVL-NHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFF--EVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKEVLEFVS 688
            F  R  + L  KG+++E    +LKNK     + NP+   +PVL N  G    ES I  +Y+DE + +K  L P DPY++A+ +  ++    K+   +     +K +E    ++E    E  K  EG    K F GGD+   VD    P   WF   E        A  PK   W+    Q    +    D K   E+++
Sbjct:   34 FAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPLGL-VPVLENSQGHLVTESVITCEYLDEAYPEK-KLFPDDPYKKARQKMTLESF-SKVPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWP---WFQRLEALELKECLAHTPKLKLWMAAMQQDPVASSHKIDAKTYREYLN 226
The following BLAST results are available for this feature:
BLAST of FC932282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTO1_MOUSE2.963e-1128.64Glutathione S-transferase omega-1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC34206H06EF PostHarveN Citrus clementina cDNA clone C34206H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932282 ID=FC932282; Name=FC932282; organism=Citrus clementina; type=EST; length=713bp
GGTGTTTGTCTTGTCTTTTCATTTATTCACTCTTGACTCTTAGTAAGCTT
CTGTCACAATGGCGAACGAAGTGGTTCTGTTGGATTTCTGGCCCAGCATG
TTTGGGATAAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTATGA
GTACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGATGA
ACCCCGTTCACAAGAAGATCCCGGTTCTCAACCACAACGGCAGACCGTTC
TGTGAGTCACCCATCATTGTTCAGTACATTGACGAAGTGTGGAAGGACAA
GGCTCCATTGCTTCCCTCTGATCCCTACCAGAGAGCTCAAGCTAGGTTCT
GGGTAGATTTCATTGACAAGAAGATGTACGATTCTTTGAGGAAGACATGG
ACCACAAAGGGAGAAGAGCAGGAGGCAGCTATGAAGGAGTTCTTTGAAGT
TCTGAAGACTTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTCGGAGGAG
ACAATTTTGGGTATGTGGATTTAAGTTTGATCCCATTCTATTGTTGGTTT
TACACGTATGAGACATGTGGAAAGTTCAACGTCGAGGCTGAGTGCCCCAA
GTTCATAGCTTGGGTGAAGAGATGCTTGCAGAGGGAGACTGTTGCCCAGG
CACTTCCTGATGGGAAAGAAGTGCTTGAATTTGTTTCAGCGATGAAGACA
AATTTAGGATTGG
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