FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_DEBHA (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Debaryomyces hansenii GN=ATM1 PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 6.181e-17 Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 PIL+ + IP G + I+GPSGSGKST+LR + R ++ SG +F+DG+DI+ + V SLRR +G++ Q LF T+ +NIRYG T+ E+++++ Sbjct: 452 PILQNASFTIPAGEKIAIVGPSGSGKSTILRLIFRFYDVESGKIFIDGQDISKVTVESLRRSIGIVPQDTPLFNDTILENIRYG----RLDATDKEIHEMI 548
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PHNC_ALCFA (Phosphonates import ATP-binding protein phnC OS=Alcaligenes faecalis GN=phnC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.072e-17 Identity = 46/100 (46.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 142 VGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDL---DVLSLRRKVGMLFQIPALFEG-TVADNIRYG 429 + L+K G LKGVN+ + G ++G+IGPSG+GKSTL+R +NRL EP G V L+G+D+ +L D+ RR++GM+FQ AL E TV +N+ G Sbjct: 4 IHNLQKSYSTGDKALKGVNLSVQPGELLGLIGPSGAGKSTLIRCVNRLVEPSEGRVLLNGKDLANLGRHDLRMARRRIGMIFQEYALVERLTVMENLLSG 103
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR1_MOUSE (Multidrug resistance protein 1 OS=Mus musculus GN=Abcb1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.072e-17 Identity = 40/103 (38.83%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 133 KFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 KF + + P+L+G+++E+ KG + ++G SG GKST+++ L R ++P +G+VFLDG++I L+V LR +G++ Q P LF+ ++A+NI YG R Sbjct: 1034 KFNGVQFNYPTRPNIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSR 1136 HSP 2 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 ILKG+N+++ G + ++G SG GKST ++ + RL++P G V +DG+DI ++V LR +G++ Q P LF T+A+NIRYG Sbjct: 408 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLEGVVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYG 490
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: POTA_LACJO (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus johnsonii GN=potA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 139 RVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALF-EGTVADNIRYGPQLRGKKLTE 459 ++ +RKE DDG LK +N+ I G ++GPSGSGK+T+LR + EP SG VF DG+DIT+LD + +RK+ +FQ ALF V +N+ +G Q++ K E Sbjct: 6 KLKHVRKEYDDGFVALKDINLTIESGKFYSLLGPSGSGKTTILRIIAGFSEPTSGQVFFDGQDITNLD--AAKRKINTVFQNYALFPHMNVFENVAFGLQIKKKDKQE 111
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_NEUCR (Iron-sulfur clusters transporter atm-1, mitochondrial OS=Neurospora crassa GN=atm-1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 1 Query: 175 APILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 +PIL+ +++ IP G + I+GPSG GKSTLLR L R ++P G +++DG+DI + + SLRR +G++ Q LF TV NIRYG Sbjct: 462 SPILRDLSLTIPAGKKVAIVGPSGCGKSTLLRLLFRFYDPQKGAIYIDGQDIRSVTLESLRRAIGVVPQDTPLFNDTVEHNIRYG 546
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCB3_DICDI (ABC transporter B family member 3 OS=Dictyostelium discoideum GN=abcB3 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQ 435 PI G N++I G +G++G SG GKST++ L R ++P G + LDG DI +V LR+K+G++ Q P LF T+++NIRYG + Sbjct: 530 PIFNGFNLKIKPGQTVGLVGDSGGGKSTIISLLERFYDPCQGEILLDGEDIRKFNVRGLRQKIGLVNQEPVLFATTISENIRYGKE 615 HSP 2 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 + +G + + G ++G SG GKST L L R + P G +F+DG +I +L+V LR G++ Q P LF GT+ADNIRYG Sbjct: 1209 VFRGFTLTLQSGTTTALVGDSGGGKSTCLSLLQRFYNPVVGEIFIDGHNIKNLNVRHLRHLFGLVGQEPTLFSGTIADNIRYG 1291
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR2_RAT (Multidrug resistance protein 2 OS=Rattus norvegicus GN=Abcb4 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 43/98 (43.88%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYK 474 ILKG+N+++ G + ++G SG GKST ++ L RL++P GT+ +DG+DI + +V LR +G++ Q P LF T+A+NIRYG RG +T +E+ K Sbjct: 408 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGTISIDGQDIRNFNVRCLREFIGVVSQEPVLFSTTIAENIRYG---RG-NVTMDEIKK 501 HSP 2 Score: 82.0333 bits (201), Expect = 1.522e-15 Identity = 37/88 (42.05%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G+++E+ KG + ++G SG GKST+++ L R ++P +GTV LDG++ L+V LR ++G++ Q P LF+ ++A NI YG R Sbjct: 1049 PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAKNIAYGDNSR 1136
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_DEHSC (Phosphate import ATP-binding protein pstB OS=Dehalococcoides sp. (strain CBDB1) GN=pstB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPS-----GTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 +LK +NM+ P+ I IIGPSG GKSTLLRALNR+ + S G V LD +I +LDV++LR++VGM+FQ P F ++ DN+ +GP++ G Sbjct: 19 VLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLG 113
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR49_DROME (Multidrug resistance protein homolog 49 OS=Drosophila melanogaster GN=Mdr49 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 172 GAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 G PIL+G+N+ I K + ++GPSGSGKST ++ L R ++P SG+V L G T+ + +LR K+G++ Q P LF+ T+A+NI YG R Sbjct: 1073 GTPILQGLNLTIKKSTTVALVGPSGSGKSTCVQLLLRYYDPVSGSVNLSGVPSTEFPLDTLRSKLGLVSQEPVLFDRTIAENIAYGNNFR 1162 HSP 2 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 42/113 (37.17%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 112 DNQIQKPKFRVGELRKE-------SDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 D + +P+ G +R E + ILKG+ +++ G + +G SG GKSTL++ + R ++P +G+V LDGRD+ L+V LR ++G++ Q P LF T+ +NIRYG Sbjct: 389 DEKGNRPENTAGHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYDPEAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFATTIGENIRYG 501
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR3_CRIGR (Multidrug resistance protein 3 OS=Cricetulus griseus GN=PGY3 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.349e-16 Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 ILKG+N+++ G + ++G SG GK+T L+ L RL++P GT+ +DG+DI + +V LR +G++ Q P LF T+A+NIRYG Sbjct: 411 ILKGLNLKVQSGQTVALVGNSGCGKTTTLQLLQRLYDPTEGTISIDGQDIRNFNVRYLREIIGVVSQEPVLFSTTIAENIRYG 493 HSP 2 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 36/88 (40.91%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G+++E+ KG + ++G SG GKST+++ L R ++P +GTV LDG++ L++ LR ++G++ Q P LF+ ++A+NI YG R Sbjct: 1052 PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVLLDGQEAKKLNIQWLRAQLGIVSQEPVLFDCSIAENIAYGDNSR 1139 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |