FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: METN_BURTA (Methionine import ATP-binding protein metN OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metN PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDL---DVLSLRRKVGMLFQ-IPALFEGTVADNIRYGPQLRGKKLTENE--VYKLLSL 486 L VN+ IP+G + GIIG SG+GKSTL+R +N L P G VF+DGRD+T L ++ RR +GM+FQ L TV N+ +L G K E E V LL L Sbjct: 21 LHNVNLTIPQGEVFGIIGRSGAGKSTLVRTINLLTRPSEGNVFVDGRDLTQLSAGELRGARRDIGMIFQHFNLLSSRTVFGNVALPLELAGVKRAEIEATVLPLLDL 127
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDL2_YEAST (ATP-dependent permease MDL2, mitochondrial OS=Saccharomyces cerevisiae GN=MDL2 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 I K +N +I G + I+GPSG GKST+ L R + P +GT+ +D +DI+ L+ SLRR +G++ Q P L GT+ DNI YG Sbjct: 463 IFKNLNFKIAPGSSVCIVGPSGRGKSTIALLLLRYYNPTTGTITIDNQDISKLNCKSLRRHIGIVQQEPVLMSGTIRDNITYG 545
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNI 420 +LKG+ ++I G +G++G +GSGKSTL++ L RL EP G + +DG DI+ L + LR + G++ Q P LFEGTV NI Sbjct: 1290 VLKGITLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDISTLGLHDLRSRFGIIPQEPVLFEGTVRSNI 1369
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB23B_ARATH (ABC transporter B family member 23, mitochondrial OS=Arabidopsis thaliana GN=ABCB23 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVY 471 IL G++ E+P G + I+G SGSGKST+LR + R ++ SG V +DG+DI ++ + SLR +G++ Q LF T+ NI YG TE EVY Sbjct: 452 ILDGISFEVPAGKSVAIVGSSGSGKSTILRMIFRFFDTDSGNVRIDGQDIKEVTLESLRSCIGVVPQDTVLFNDTIFHNIHYG----NLSATEEEVY 544
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB14B_ARATH (ABC transporter B family member 14 OS=Arabidopsis thaliana GN=ABCB14 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 33/83 (39.76%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 I K +N+ + G + ++GPSGSGKST++ + R ++P +G + +DG DI +++ SLR+K+ ++ Q PALF ++ +NI+YG Sbjct: 1023 IFKNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGNLCIDGHDIKSVNLRSLRKKLALVQQEPALFSTSIHENIKYG 1105 HSP 2 Score: 74.3294 bits (181), Expect = 3.174e-13 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQ 435 + + ++ I G +GPSGSGKST++ + R +EP SG + LDG DI +L + LR ++G++ Q PALF T+A NI G + Sbjct: 389 VFENLSFTIHSGKTFAFVGPSGSGKSTIISMVQRFYEPRSGEILLDGNDIKNLKLKWLREQMGLVSQEPALFATTIASNILLGKE 473
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_ROSDO (Phosphate import ATP-binding protein pstB OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pstB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEP-----PSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 +K VN+EI + IGPSG GKST LR LNR+ + G + +DG DI D +D + LR KVGM+FQ P F ++ DN+ YGP++ G + E+ L+ Sbjct: 33 IKDVNVEIQDKTVTAFIGPSGCGKSTFLRCLNRMNDTIDVCRVQGRITIDGEDIYDKRVDPVQLRAKVGMVFQKPNPFPKSIYDNVAYGPRIHGLAQNKAELDNLV 138
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_METAC (Phosphate import ATP-binding protein pstB OS=Methanosarcina acetivorans GN=pstB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 LK ++M+IPK + +IGPSG GKST +R LNR+ + G V ++ DI + +DV+ LR++VGM+FQ P F ++ DNI YGP++ G Sbjct: 28 LKNISMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEDEDIYEKGVDVVELRKRVGMVFQKPNPFPMSIYDNIAYGPRIHG 121
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_BRUSU (Phosphate import ATP-binding protein pstB OS=Brucella suis GN=pstB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 41/103 (39.81%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 193 VNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPP-----SGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 V+++IP+ ++ +IGPSG GKST LR+LNR+ + +G + LD DI D LDV+ LR +VGM+FQ P F ++ +N+ YGP++ G ++ E+ +++ Sbjct: 44 VDLDIPEKMVTALIGPSGCGKSTFLRSLNRMNDTIEGCRIAGRITLDNEDIYDPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELEEIV 146
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_BRUME (Phosphate import ATP-binding protein pstB OS=Brucella melitensis GN=pstB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 41/103 (39.81%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 193 VNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPP-----SGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 V+++IP+ ++ +IGPSG GKST LR+LNR+ + +G + LD DI D LDV+ LR +VGM+FQ P F ++ +N+ YGP++ G ++ E+ +++ Sbjct: 44 VDLDIPEKMVTALIGPSGCGKSTFLRSLNRMNDTIEGCRIAGRITLDNEDIYDPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELEEIV 146
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_BRUAB (Phosphate import ATP-binding protein pstB OS=Brucella abortus GN=pstB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 41/103 (39.81%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 193 VNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPP-----SGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 V+++IP+ ++ +IGPSG GKST LR+LNR+ + +G + LD DI D LDV+ LR +VGM+FQ P F ++ +N+ YGP++ G ++ E+ +++ Sbjct: 44 VDLDIPEKMVTALIGPSGCGKSTFLRSLNRMNDTIEGCRIAGRITLDNEDIYDPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELEEIV 146 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |