FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_CHAGB (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Chaetomium globosum GN=ATM1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.349e-16 Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 PIL +++ IP G + ++GPSG GKSTLLR L R ++P SG +F+D +DI D+ + SLRR +G++ Q LF TV NIRYG Sbjct: 359 PILNNLSVTIPAGKKVAVVGPSGCGKSTLLRLLFRSYDPQSGRIFIDDQDIRDVSLDSLRRSIGVVPQDTPLFNDTVELNIRYG 442
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_METBU (Phosphate import ATP-binding protein pstB OS=Methanococcoides burtonii (strain DSM 6242) GN=pstB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.068e-16 Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG--KKLTENEVYKLL 480 LK ++++IP+ + +IGPSG GKST LR LNR+ + G V +DG +I D+DV+ LR+ VGM+FQ P F ++ DNI YGP++ G K TE V+K L Sbjct: 25 LKDISLDIPEKSVTALIGPSGCGKSTFLRCLNRMNDLVKSCSIEGEVLVDGENIYDKDVDVVDLRKNVGMVFQKPNPFPMSIYDNIAYGPKIHGCSKSETEERVHKAL 132
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_DEHE1 (Phosphate import ATP-binding protein pstB OS=Dehalococcoides ethenogenes (strain 195) GN=pstB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.006e-16 Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGT-----VFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 +LK +NM+ P I IIGPSG GKSTLLRALNR+ + SG V LD ++ +LDV++LR++VGM+FQ P F ++ DN+ +GP++ G Sbjct: 19 VLKNINMDFPDRQITAIIGPSGCGKSTLLRALNRMNDLVSGARLEGEVLLDNENVYSPNLDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLG 113
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_ARCFU (Phosphate import ATP-binding protein pstB OS=Archaeoglobus fulgidus GN=pstB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.006e-16 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGT-----VFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 ++ VN+EI + + IIGPSG GKSTLLR+LNRL E G V DG++I D +D + LRR++GM+FQ P F ++ DN+ YGP++ G K Sbjct: 20 IRNVNLEIYRNKVTAIIGPSGCGKSTLLRSLNRLIELVDGVRIEGEVIFDGKNIYDDGVDAVELRRRIGMVFQHPNPFPKSIFDNVAYGPRVHGIK 115
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_ALHEH (Phosphate import ATP-binding protein pstB OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=pstB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.006e-16 Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 +LKGV+MEIP+G I IGPSG GKSTLLR NR+ + G + +DG DI D +D+ LRR+VGM+FQ P F ++ +N+ YG +L+G Sbjct: 53 VLKGVDMEIPRGRITAFIGPSGCGKSTLLRCFNRMNDLIDNCRIEGHIRIDGEDIYDRRVDIPELRRRVGMVFQKPNPFPKSIYENVAYGLRLQG 147
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCBA_MOUSE (ATP-binding cassette sub-family B member 10, mitochondrial OS=Mus musculus GN=Abcb10 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 + + ++ IP G + ++GPSGSGKST++ L RL++P SGTV LDG DI L+ + LR K+G + Q P LF +VA+NI YG Sbjct: 474 VFQDFSLSIPSGSVTALVGPSGSGKSTVVSLLLRLYDPNSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSVAENIAYG 556
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_METST (Phosphate import ATP-binding protein pstB OS=Methanosphaera stadtmanae (strain DSM 3091) GN=pstB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 D +LK +N +I K + +IGPSG GKST LR LNR+ + G + LDG+DI D +DV+ LR+KVGM+FQ F ++ DN+ YG ++ G+K E+++ K++ Sbjct: 16 DDHNVLKNINTDIEKNSVTALIGPSGCGKSTFLRTLNRMNDLIPIFRKEGQILLDGKDIYDNNVDVVELRKKVGMVFQKANPFPKSIYDNVAYGLRIHGEK-DEDKIEKIV 125
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_ALCBS (Phosphate import ATP-binding protein pstB OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=pstB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 1 Query: 121 IQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 + PK R+ ++ DD I GV+++I K ++ +IGPSG GKST LR LNR+ + G++ L+ +D+ D LDV+ LR +VGM+FQ P F ++ DN+ YGP++ G Sbjct: 45 VDDPKMRLRDVEVFYDDNQAI-HGVSLDIGKNEVVSLIGPSGCGKSTFLRCLNRMNDTIDICKVKGSLHLESQDLYDPKLDVVELRARVGMVFQKPNPFPKSIYDNVAYGPRIHG 158
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB1_MAGSA (Phosphate import ATP-binding protein pstB 1 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=pstB1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 193 VNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 VN++IP G + +IGPSG GKST LR +NR+ + SG++FLDG DI D +DV+ LR +VGM+FQ P F ++ +N+ +GP+L G +E+ +++ Sbjct: 31 VNLDIPVGQVTALIGPSGCGKSTFLRCINRMNDLVEIARVSGSLFLDGIDIQDAAMDVVQLRARVGMVFQRPNPFPKSIYENVAFGPRLHGLAAGADELDEIV 133
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: POTA_LACGA (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=potA PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 139 RVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALF-EGTVADNIRYGPQLRGKKLTE 459 ++ +RKE DDG LK +N+ I G ++GPSGSGK+T+LR + EP SG VF G+DIT+LD + +RK+ +FQ ALF V +N+ +G Q++ K E Sbjct: 6 KLTHVRKEYDDGFVALKDINLTIESGKFYSLLGPSGSGKTTILRIIAGFSEPTSGQVFFAGKDITNLD--AAKRKINTVFQNYALFPHMNVFENVAFGLQIKKKDKQE 111 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |