FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: METN_DESHY (Methionine import ATP-binding protein metN OS=Desulfitobacterium hafniense (strain Y51) GN=metN PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSL---RRKVGMLFQIPALFEG-TVADNIRYGPQLRGKKLTENE--VYKLLSL 486 ++ ++++IPKG I GIIG SG+GKSTL+R +NRL EP G + +DG+D+T + + L R+K+GM+FQ L + TV DNI + ++ G K E E V +LL L Sbjct: 21 IEDISLDIPKGAIYGIIGLSGAGKSTLVRCINRLEEPTGGKIIIDGQDLTAMSAVELRQARQKIGMIFQHFHLLQSRTVFDNIAFPLEIAGFKKPEIEARVKELLPL 127
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR2_MOUSE (Multidrug resistance protein 2 OS=Mus musculus GN=Abcb4 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 42/98 (42.86%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYK 474 ILKG+N+++ G + ++G SG GKST ++ L RL++P G + +DG+DI + +V LR +G++ Q P LF T+A+NIRYG RG +T +E+ K Sbjct: 408 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGKISIDGQDIRNFNVRCLREIIGVVSQEPVLFSTTIAENIRYG---RG-NVTMDEIEK 501 HSP 2 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 36/88 (40.91%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G+++E+ KG + ++G SG GKST+++ L R ++P +G+V LDG++ L+V LR ++G++ Q P LF+ ++A+NI YG R Sbjct: 1047 PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSR 1134
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_USTMA (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Ustilago maydis GN=ATM1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 106 EDDNQIQKPKFRVGELRKES-----DDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 ++D K GE+R E+ PI + ++ +P G +GPSG GKST+ R L R +EP SG +++DG+DIT + + SLRR +G++ Q LF + NIRYG Sbjct: 482 KEDKNAPPLKVSGGEIRFENVTFGYHPDRPIFRNISFTVPAGYKTAFVGPSGCGKSTIFRLLFRFYEPQSGKIYIDGQDITKVSLESLRRHIGVVPQDTPLFNDDIRHNIRYG 594
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCB1_DICDI (ABC transporter B family member 1 OS=Dictyostelium discoideum GN=abcB1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 118 QIQKPKFRVGELR-KESDDGAP------ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 QIQ P +GE+ K+ + P +LKG+N+++ KG I ++GPSG GKST++ + R ++P SG++ DG DI +LD + R +G + Q P LF G++ DNI +G Sbjct: 658 QIQNP---LGEIELKDVEFSYPTRPNNSVLKGLNLKLSKGTITALVGPSGGGKSTVIAMIERFYDPNSGSITFDGIDIKELDPVWYRGIIGYVSQEPVLFAGSIKDNITFG 765
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_PYRAE (Phosphate import ATP-binding protein pstB OS=Pyrobaculum aerophilum GN=pstB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.925e-16 Identity = 53/119 (44.54%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 157 KESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITDLDVLSLRRKVGMLFQIP------ALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 K S +LKGVN+EI + I ++GPSGSGKSTLLR NRL E SG V LDG+D+ +DV+ LRR+V M+FQIP ++FE VA ++ ++ KK E V + L Sbjct: 10 KLSFGNVEVLKGVNLEIKERTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVLLDGQDVFKMDVIELRRRVQMIFQIPNPIPNLSIFE-NVALGLKLNRIVKSKKELEARVRQAL 127
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_GIBZE (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Gibberella zeae GN=ATM1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.925e-16 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 145 GELRKESDDGA-----PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 GE++ E+ + A PIL+ +++ IP G + ++GPSG GKSTLLR L R ++ G V +D +DI D+D+ SLRR +G++ Q LF TV NIRYG Sbjct: 437 GEIKFENVNFAYHPNRPILRDLSLTIPAGKKVAVVGPSGCGKSTLLRLLFRSYDVQGGRVLIDDQDIRDVDLESLRRSIGVVPQDTPLFNDTVEHNIRYG 536
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_ASHGO (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Ashbya gossypii GN=ATM1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.925e-16 Identity = 48/129 (37.21%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 46 SLFRDEVREHLLTVPGEAEAEDDNQIQKP-KFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 SLF+ ++++ +T+ A++ I KP R + D IL V+ IP G+ I+GPSGSGKST+L+ + R +EP G + + G DI DLD+LSLR+ +G++ Q LF T+ +N+++G Sbjct: 407 SLFK--LQKNQVTIKNSPNAQN-LPIHKPLDIRFENVTFGYDPERRILNNVSFTIPAGMKTAIVGPSGSGKSTILKLVFRFYEPEQGRILVGGTDIRDLDLLSLRKAIGVVPQDTPLFNDTIWENVKFG 532
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB2B_ARATH (ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 8.925e-16 Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 I +N+ IP G I+ ++G SGSGKST++ + R +EP SG V LDG +I++LD+ LR ++G++ Q PALF T+ +NI YG Sbjct: 378 IFDRLNLAIPAGKIVALVGGSGSGKSTVISLIERFYEPISGAVLLDGNNISELDIKWLRGQIGLVNQEPALFATTIRENILYG 460 HSP 2 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 61 EVREHLLTVPGEAEAEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 E+ + + GE E +N + + S I + ++ + G M ++G SGSGKS+++ + R ++P +G V ++G+DI LD+ +LR+ +G++ Q PALF T+ +NI YG Sbjct: 967 EILDRKTQIVGETSEELNNVEGTIELKGVHFSYPSRPDVVIFRDFDLIVRAGKSMALVGQSGSGKSSVISLILRFYDPTAGKVMIEGKDIKKLDLKALRKHIGLVQQEPALFATTIYENILYG 1089
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_MOOTA (Phosphate import ATP-binding protein pstB OS=Moorella thermoacetica (strain ATCC 39073) GN=pstB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.166e-15 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 LK VN+EI + +IGPSG GKST LR LNRL + SG + LDG++I ++DV++LR++VGM+FQ P F ++ DNI YGP++ G Sbjct: 21 LKDVNLEIQAHAVTALIGPSGCGKSTFLRTLNRLNDLIDGVRISGEILLDGQNIYAPEVDVVALRKRVGMVFQRPNPFPMSIYDNIAYGPRIHG 114
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB2_NATPD (Phosphate import ATP-binding protein pstB 2 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=pstB2 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.166e-15 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDI---TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 DG +L+ V + + +G + IIGPSG+GK+TLLR L EP GT+ LDG D+ ++ L+ RR++GM+FQ LF+ TV N+RYG +R Sbjct: 46 DGTAVLESVTLAVDRGETVAIIGPSGTGKTTLLRLLALFSEPDDGTIGLDGTDVWRQSERQRLAARRRIGMVFQKANLFDTTVRRNVRYGLSVR 139 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |