FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: POTA_LACAC (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus acidophilus GN=potA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.166e-15 Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 139 RVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEG-TVADNIRYGPQLRGKKLTE 459 ++ + K DDG LK +N+ I G ++GPSGSGKST+LR + +P SG VF DG+DITDLD + +R + +FQ ALF V +N+ +G +++ K L E Sbjct: 5 KLKHITKRYDDGFIALKDINITIESGKFYSLLGPSGSGKSTILRIIAGFTQPSSGQVFFDGKDITDLD--ASKRHINTVFQNYALFPHLNVFENVAFGLKIKKKPLNE 110
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB1_SYMTH (Phosphate import ATP-binding protein pstB 1 OS=Symbiobacterium thermophilum GN=pstB1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.522e-15 Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 L+ +++EIP + +IGPSG GKS+ LR LNR+ + GT+ LDG DI +DV++LRR+VGM+FQ P F ++ DN+ YGP++ G++ Sbjct: 11 LRSISLEIPANRVTALIGPSGCGKSSFLRCLNRMNDLIPGARVEGTITLDGADIYAPGVDVVALRRRVGMVFQRPNPFPMSIYDNVAYGPRIHGER 106
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR1_RAT (Multidrug resistance protein 1 OS=Rattus norvegicus GN=Abcb1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.522e-15 Identity = 41/98 (41.84%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYK 474 ILKG+N+++ G + ++G SG GKST ++ L RL++P G V +DG+DI ++V LR +G++ Q P LF T+A+NIRYG + +T +E+ K Sbjct: 408 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPIEGEVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGRE----NVTMDEIEK 501 HSP 2 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G++ E+ KG + ++G SG GKST+++ L R + P +GTVFLDG++I L+V + R +G++ Q P LF+ ++A+NI YG R Sbjct: 1051 PVLQGLSFEVKKGQTLRLVGSSGCGKSTVVQLLERFYNPMAGTVFLDGKEIKQLNVQCV-RALGIVSQEPILFDCSIAENIAYGDNSR 1137
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR1_HUMAN (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.522e-15 Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 112 DNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYK 474 DN +FR S ILKG+N+++ G + ++G SG GKST ++ + RL++P G V +DG+DI ++V LR +G++ Q P LF T+A+NIRYG + +T +E+ K Sbjct: 386 DNIKGNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENIRYGRE----NVTMDEIEK 502 HSP 2 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 37/88 (42.05%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G+++E+ KG + ++G SG GKST+++ L R ++P +G V LDG++I L+V LR +G++ Q P LF+ ++A+NI YG R Sbjct: 1051 PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSR 1138
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_METBF (Phosphate import ATP-binding protein pstB OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=pstB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 LK V+M+IPK I +IGPSG GKST +R LNR+ + G V ++G+DI D+D + LR+ VGM+FQ P F ++ DN+ YGP++ G Sbjct: 28 LKNVSMQIPKNSITALIGPSGCGKSTFIRCLNRMNDLINNCRIEGKVSIEGKDIYEPDVDAVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHG 121
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_CLOPS (Phosphate import ATP-binding protein pstB OS=Clostridium perfringens (strain SM101 / Type A) GN=pstB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI-TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 LK +N++I + + +IGPSG GKST LR LNR+ + G + +DG+DI D DV++LR KVGM+FQ P LF ++ DN+ YGP++ G K Sbjct: 23 LKKINIDIKENEVTALIGPSGCGKSTFLRTLNRMNDLIPIVRIEGEIQVDGKDIYKDDDVIALRTKVGMVFQKPNLFPMSIYDNVAYGPRVHGIK 117
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_CLOPE (Phosphate import ATP-binding protein pstB OS=Clostridium perfringens GN=pstB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI-TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 LK +N++I + + +IGPSG GKST LR LNR+ + G + +DG+DI D DV++LR KVGM+FQ P LF ++ DN+ YGP++ G K Sbjct: 23 LKKINIDIKENEVTALIGPSGCGKSTFLRTLNRMNDLIPIVRIEGEIQVDGKDIYKDDDVIALRTKVGMVFQKPNLFPMSIYDNVAYGPRVHGIK 117
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_CLOP1 (Phosphate import ATP-binding protein pstB OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pstB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI-TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 LK +N++I + + +IGPSG GKST LR LNR+ + G + +DG+DI D DV++LR KVGM+FQ P LF ++ DN+ YGP++ G K Sbjct: 23 LKKINIDIKENEVTALIGPSGCGKSTFLRTLNRMNDLIPIVRIEGEIQVDGKDIYKDDDVIALRTKVGMVFQKPNLFPMSIYDNVAYGPRVHGIK 117
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: CYSA_SYNY3 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Synechocystis sp. (strain PCC 6803) GN=cysA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 45/104 (43.27%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEG-TVADNIRYGPQLR--GKKLTENEVYKLLSL 486 LK +N+E+P G ++ ++GPSGSGKSTLLRA+ L EP G + ++G+D T +D+ +R +G +FQ ALF+ T+ NI +G ++R T+ V +LLSL Sbjct: 18 LKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIIINGQDATHVDI--RKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTKERVEELLSL 119
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: CBIO_METTH (Putative cobalt import ATP-binding protein cbiO OS=Methanobacterium thermoautotrophicum GN=cbiO PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 43/104 (41.35%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGR--DITDLDVLSLRRKVGMLFQIP--ALFEGTVADNIRYGPQLRGKKLTENEV 468 DG P L+G+NM++ +G + +IGP+G+GKSTL LN + +P +G V +DG D + +++ +R+KVG++FQ P LF TV +++ +GP G L E+EV Sbjct: 13 DGTPALRGINMKVERGERVAVIGPNGAGKSTLFLHLNGILKPAAGEVIIDGERVDYSKDELIKIRQKVGIVFQNPDDQLFSPTVREDVAFGPMNLG--LPEDEV 114 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |