FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCB7_RAT (ATP-binding cassette sub-family B member 7, mitochondrial OS=Rattus norvegicus GN=Abcb7 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 39/87 (44.83%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 +G +L GV+ E+P G + I+G SGSGKST++R L R +EP G+++L G++I D+ + SLRR VG++ Q LF T+ N+ YG Sbjct: 483 EGQKVLSGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYG 569
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_LACDA (Phosphate import ATP-binding protein pstB OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=pstB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSG-----TVFLDGRDIT--DLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 L +NM I K I IGPSG GKSTLLR+LNR+ + G ++ LDG DI DLDV LR++VGM+FQ P F +V DN+ YGP++ G Sbjct: 21 LHDINMHIQKNEITAFIGPSGCGKSTLLRSLNRMNDLVEGCRIDGSIKLDGTDIYNGDLDVTVLRQRVGMVFQRPNPFPMSVYDNVAYGPRIHG 114
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_ACIAD (Phosphate import ATP-binding protein pstB OS=Acinetobacter sp. (strain ADP1) GN=pstB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 46/112 (41.07%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEP-----PSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG--------KKLTENEVYK 474 +KG+++EI + ++ IGPSG GKST LR LNR+ + +G V LD +DI D LDV+ LR +VGM+FQ P F ++ +N+ YGP+L G +++ EN ++K Sbjct: 71 IKGIDLEIYENEVIAFIGPSGCGKSTFLRTLNRMNDTIDSCRVTGKVLLDNQDIYDPNLDVVLLRAQVGMVFQKPNPFPKSIFENVAYGPKLHGLARDKYDLEEIVENSLHK 182
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB3_MAGSA (Phosphate import ATP-binding protein pstB 3 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=pstB3 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 172 GAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI---TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 G P LKGV+++I G + +IGPSG GKST LR LNR+ + SG LDG DI +D + LR +VGM+FQ P F ++ DN+ +GP+L G Sbjct: 21 GKPALKGVDLDIVAGEVNALIGPSGCGKSTFLRCLNRMNDTIPAAKVSGQATLDGEDIYGPAGMDPVLLRARVGMVFQRPNPFPKSIYDNVAFGPRLHG 119
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB2_MAGSA (Phosphate import ATP-binding protein pstB 2 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=pstB2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 42/106 (39.62%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 L ++++IP G + +IGPSG GKST LR +NR+ + +G++ LDG D+ D LDV+ LR +VGM+FQ P F ++ DN+ YGP++ G + E+ +++ Sbjct: 27 LHDIDLDIPAGEVTALIGPSGCGKSTFLRCINRMNDMVDGAKVTGSLTLDGSDVYDRSLDVVQLRARVGMVFQKPNPFPKSIYDNVAYGPRIHGLARDQAELDEIV 132
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: METN_HELHP (Methionine import ATP-binding protein metN OS=Helicobacter hepaticus GN=metN PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 139 RVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSL---RRKVGMLFQ-IPALFEGTVADNIRYGPQLR--GKKLTENEVYKLLSL 486 ++ + K +G LK +++E+ KG IMGIIG SG+GKSTL+R +NRL EP SGT+F+DG ++ L L R+K+GM+FQ L V DN+ + ++ KK + V +LL L Sbjct: 3 KLNHINKTYPNGFVALKNIDLEVAKGDIMGIIGYSGAGKSTLIRIINRLEEPTSGTLFVDGVNMLGLKQKELQMQRQKIGMIFQHFNLLSARNVFDNVAFALEIAKWDKKAIKPRVDELLEL 124
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCB7_HUMAN (ATP-binding cassette sub-family B member 7, mitochondrial OS=Homo sapiens GN=ABCB7 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 +G +L G++ E+P G + I+G SGSGKST++R L R +EP G+++L G++I D+ + SLRR VG++ Q LF T+ N+ YG Sbjct: 483 EGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYG 569
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCB2_DICDI (ABC transporter B family member 2 OS=Dictyostelium discoideum GN=abcB2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 35/83 (42.17%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 I N+ I KG + ++G SG GKS+++ L R ++P G V+LDG +I ++++ SLRR +G++ Q P LF ++A+NIRYG Sbjct: 491 IFNNFNLTIKKGTTVALVGDSGGGKSSVIGLLERFYDPDEGEVYLDGTNIKEINIHSLRRNIGLVSQEPVLFANSIAENIRYG 573 HSP 2 Score: 71.633 bits (174), Expect = 2.058e-12 Identity = 33/83 (39.76%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 + +G N+ IP G + ++G SG GKS+++ L R + P G++ +DG +I DL++ LR +G++ Q P LF GT+ +NI YG Sbjct: 1176 VFQGFNLVIPHGKKVALVGNSGGGKSSVISLLERFYNPSQGSITIDGVNIKDLNLNWLRGNMGLVGQEPFLFSGTIFENIIYG 1258
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB13B_ARATH (ABC transporter B family member 13 OS=Arabidopsis thaliana GN=ABCB13 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 35/83 (42.17%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 I K +N+ + G + ++GPSGSGKST++ + R ++P +G + +DG+DI L++ SLR+K+ ++ Q PALF T+ +NI+YG Sbjct: 1021 IFKNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGNLCIDGQDIKTLNLRSLRKKLALVQQEPALFSTTIYENIKYG 1103 HSP 2 Score: 72.4034 bits (176), Expect = 1.206e-12 Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQ 435 + + ++ I G +GPSGSGKST++ + R +EP SG + LDG DI L + R ++G++ Q PALF T+A NI G + Sbjct: 388 VFENLSFTIRSGKTFAFVGPSGSGKSTIISMVQRFYEPNSGEILLDGNDIKSLKLKWFREQLGLVSQEPALFATTIASNILLGKE 472
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PHNC1_ROSDO (Phosphonates import ATP-binding protein phnC 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=phnC1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 139 RVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSL---RRKVGMLFQIPALFEG-TVADNIRYG 429 R+ +L K G LK V++EIP+G ++ +IGPSG+GKSTL+R +NRL EP SG V+L ++T L +L RR++GM+FQ AL E TV +N+ G Sbjct: 3 RLEKLVKTYKTGDQALKEVDLEIPQGQVLALIGPSGAGKSTLIRCVNRLVEPSSGKVYLGNVELTGLSSSALRRERRRMGMIFQEYALVERLTVMENVLSG 103 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |