FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MSBA_SYNAS (Lipid A export ATP-binding/permease protein msbA OS=Syntrophus aciditrophicus (strain SB) GN=msbA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 35/89 (39.33%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQ 435 D P+L+ +N+ I G ++ +G SG GK+TL+ + R ++ +G + +DG DI D+ ++SLRR++G++ Q LF TV +NI YG Q Sbjct: 362 DDTPVLRNINLTIRAGEVVAFVGMSGGGKTTLVNLIPRFYDVTAGQILIDGHDIRDVSLISLRRQIGIVTQQTILFNDTVRNNIAYGSQ 450
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR_ORYSJ (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=Os02g0190300 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 13 IEVIQKMPSTCSLFRDEVREHLLTVPGEAEAEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQ 435 +EVI+++P S + E L V GE E FR E S +PI N+ +P G + ++G SGSGKST++ L R ++P +G V +DG DI L + LR ++G++ Q PALF ++ +NI +G + Sbjct: 333 LEVIRRVPKIDS--ESDTGEELANVTGEVE-----------FRNVEFCYPSRPESPIFVSFNLRVPAGRTVALVGGSGSGKSTVIALLERFYDPSAGEVMVDGVDIRRLRLKWLRAQMGLVSQEPALFATSIRENILFGKE 460 HSP 2 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 58 DEVREHLLTVPGEAEAEDDN-QIQKPKFRVGELRKESDDGAP-------ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQ 435 D V + E E + DN Q KP+ GE+ D A I KG + I G ++G SGSGKST++ + R ++P G+V +DGRDI ++ +LRR +G++ Q P LF GT+ +NI YG + Sbjct: 965 DAVASVFAVLDRETEIDPDNPQGYKPEKLKGEVDIRGVDFAYPSRPDVIIFKGFTLSIQPGKSTALVGQSGSGKSTIIGLIERFYDPIRGSVKIDGRDIKAYNLRALRRHIGLVSQEPTLFAGTIRENIVYGTE 1098
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR3_HUMAN (Multidrug resistance protein 3 OS=Homo sapiens GN=ABCB4 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 41/98 (41.84%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYK 474 ILKG+N+++ G + ++G SG GKST ++ + RL++P GT+ +DG+DI + +V LR +G++ Q P LF T+A+NI YG RG +T +E+ K Sbjct: 411 ILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIRNFNVNYLREIIGVVSQEPVLFSTTIAENICYG---RG-NVTMDEIKK 504 HSP 2 Score: 78.1814 bits (191), Expect = 2.198e-14 Identity = 38/95 (40.00%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVF-------LDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G+++E+ KG + ++G SG GKST+++ L R ++P +GTVF LDG++ L+V LR ++G++ Q P LF+ ++A+NI YG R Sbjct: 1050 PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGTVFVDFGFQLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSR 1144
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCB7_MOUSE (ATP-binding cassette sub-family B member 7, mitochondrial OS=Mus musculus GN=Abcb7 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 +G +L GV+ E+P G + I+G SGSGKST++R L R +EP G+++L G+++ D+ + SLRR VG++ Q LF T+ N+ YG Sbjct: 483 EGQKVLNGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNLQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYG 569
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB22B_ARATH (ABC transporter B family member 22 OS=Arabidopsis thaliana GN=ABCB22 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEV 468 I K +++I +G I+GPSGSGKST++ + R ++P G V +DGRDI + SLR+ +G++ Q P LF GT+ +NI YG K+ E+E+ Sbjct: 1034 IFKNFSIDIDEGKSTAIVGPSGSGKSTIIGLIERFYDPLKGIVKIDGRDIRSYHLRSLRQHIGLVSQEPILFAGTIRENIMYGG--ASDKIDESEI 1127 HSP 2 Score: 70.8626 bits (172), Expect = 3.510e-12 Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 1 Query: 13 IEVIQKMPSTCSLFRDEVREHLL-TVPGEAEAEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQ 435 IEVI+++P S D R +L + GE + F+ + S PI + + IP G + ++G SGSGKST++ L R ++P G + +DG I L V LR ++G++ Q PALF ++ +NI +G + Sbjct: 353 IEVIKRVPDIDS---DNPRGQVLENIKGEVQ-----------FKHVKFMYSSRPETPIFDDLCLRIPSGKSVALVGGSGSGKSTVISLLQRFYDPIVGEILIDGVSIKKLQVKWLRSQMGLVSQEPALFATSIEENILFGKE 480
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_METMA (Phosphate import ATP-binding protein pstB OS=Methanosarcina mazei GN=pstB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPS-----GTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 LK V+++IP+ + +IGPSG GKST +R LNR+ + G V ++ DI TD+DV+ LR++VGM+FQ P F ++ DN+ YGP++ G Sbjct: 28 LKNVSLKIPRNSVTALIGPSGCGKSTFIRCLNRMNDLVKNCRIEGKVLIENEDIYGTDVDVVELRKQVGMVFQKPNPFPMSIYDNVAYGPRIHG 121
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_BORBU (Phosphate import ATP-binding protein pstB OS=Borrelia burgdorferi GN=pstB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 L +NM+I K I +IGPSG GKST LR LNR+ + G V +G++I + D+L LRRK+GM+FQ P F ++ DNI YGP++ G K Sbjct: 29 LNKINMKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTK 124
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB2_CHRSD (Phosphate import ATP-binding protein pstB 2 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=pstB2 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 48/116 (41.38%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG----KKLTENEVYKLLS 483 D P L + +++P+ + IGPSG GKSTLLRALNRL + +G + L+G+DI ++DV LRR+VGM+FQ P F ++ +N+ YG +L+G ++L E + LLS Sbjct: 21 DDKPALSDLTLKVPRHRVTAFIGPSGCGKSTLLRALNRLHDLNDQVTRTGRIRLEGQDIHAREVDVAELRRRVGMVFQAPNPFPMSIYENVAYGLRLQGIRRKRELDEIIEWALLS 136
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PHNC_WOLSU (Phosphonates import ATP-binding protein phnC OS=Wolinella succinogenes GN=phnC PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 46/101 (45.54%), Postives = 66/101 (65.35%), Query Frame = 1 Query: 139 RVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSL---RRKVGMLFQIPALFEG-TVADNIRYG 429 ++ L K LKGV++EI KG ++G+IGPSG+GKSTL+R +NRL EP SG V+L+G ++ L L RR++GM+FQ AL E +V +N+ G Sbjct: 3 KIENLTKRYKGDEIALKGVSLEIKKGQVVGLIGPSGAGKSTLIRCINRLIEPSSGEVWLEGVNLPSLSRTKLKEARREMGMIFQEYALIERLSVMENVLSG 103
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_ASPFU (Iron-sulfur clusters transporter atm1, mitochondrial OS=Aspergillus fumigatus GN=atm1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 145 GELRKES-----DDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYK 474 GE+R E+ PILK + IP G I+GPSG GKST+LR L R ++ G + +D +D+ D+ + SLR+ +G++ Q LF T+A NIRYG T+ EV+K Sbjct: 454 GEIRFENVTFGYHPDRPILKNASFTIPAGQKFAIVGPSGCGKSTILRLLFRFYDVQEGRILIDDQDVRDVSLESLRKAIGVVPQDTPLFNDTIAHNIRYG----RIDATDEEVHK 564 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |