FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCBB_HUMAN (Bile salt export pump OS=Homo sapiens GN=ABCB11 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 IL +NM I G + ++GPSG+GKST L+ + R ++P G V +DG DI L++ LR ++G++ Q P LF T+A+NIRYG Sbjct: 437 ILNDLNMVIKPGEMTALVGPSGAGKSTALQLIQRFYDPCEGMVTVDGHDIRSLNIQWLRDQIGIVEQEPVLFSTTIAENIRYG 519 HSP 2 Score: 71.633 bits (174), Expect = 2.058e-12 Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 67 REHLLTVPGEAEAEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 R+ ++V A + DN K F + S + +L G+++ I G + +G SG GKST ++ L R ++P G V +DG D ++V LR +G++ Q P LF ++ DNI+YG Sbjct: 1057 RQPPISVYNTAGEKWDNFQGKIDFVDCKFTYPSRPDSQVLNGLSVSISPGQTLAFVGSSGCGKSTSIQLLERFYDPDQGKVMIDGHDSKKVNVQFLRSNIGIVSQEPVLFACSIMDNIKYG 1177
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR65_DROME (Multidrug resistance protein homolog 65 OS=Drosophila melanogaster GN=Mdr65 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 5.785e-15 Identity = 43/120 (35.83%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 103 AEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDIT-DLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTE 459 A+ N + ++R + R + A IL G+++E+ KG + ++G SG GKST ++ L R ++P GT+ +D DI DL + +R K+G++ Q P LFE ++A+NI YG R + E Sbjct: 1050 AKQLNLFEGVRYRGIQFRYPTRPDAKILNGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVE 1169 HSP 2 Score: 68.5514 bits (166), Expect = 1.742e-11 Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 187 KGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 +G+N+ I G + ++G SG GKST ++ L R ++P G+V LD DI ++ LR + ++ Q P LF GT+A NI YG Sbjct: 424 RGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYG 504
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_CANAL (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Candida albicans GN=ATM1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.785e-15 Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 1 Query: 145 GELRKES-----DDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLLS 483 GE+R E+ PIL + IP G + I+GPSGSGKST+LR + R ++ G + +DG+DI+ + + SLR+ +G++ Q LF T+ +NIRYG ++ E+Y++++ Sbjct: 464 GEIRFENVSFGYHPDRPILNNASFTIPAGQKVAIVGPSGSGKSTILRLIFRFYDINQGRILIDGQDISKVSLESLRKLIGIVPQETPLFNDTILENIRYG----RLDASDEEIYRVIN 577
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCB6_HUMAN (ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo sapiens GN=ABCB6 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.785e-15 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 118 QIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTE 459 + QK + + DG L+ V+ + G + ++GPSG+GKST+LR L R ++ SG + +DG+DI+ + SLR +G++ Q LF T+ADNIRYG G E Sbjct: 584 RFQKGRIEFENVHFSYADGRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVE 697
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: METN_RHILO (Methionine import ATP-binding protein metN OS=Rhizobium loti GN=metN PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDL---DVLSLRRKVGMLFQ-IPALFEGTVADNIRYGPQLRGKKLTE 459 P + G+++ + KG I+GIIG SG+GKSTL+R LN L P SG VF++GR+I L D+ LRR++GM+FQ L TV DN+ ++ G+ E Sbjct: 39 PAIDGISLTVRKGEILGIIGRSGAGKSTLIRCLNGLERPDSGEVFIEGREIGRLGERDLQPLRRRIGMIFQHFNLLSAKTVEDNVALPLKIEGRPKAE 136
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ATM1_ASPOR (Iron-sulfur clusters transporter atm1, mitochondrial OS=Aspergillus oryzae GN=atm1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 PILK + IP G I+GPSG GKST+LR L R ++ G + +DG+D+ D+ + SLR+ +G++ Q LF ++A NIRYG Sbjct: 466 PILKNASFTIPAGQKFAIVGPSGCGKSTILRLLFRYYDVQEGRILVDGQDVRDVTLESLRKAIGVVPQDTPLFNDSIAHNIRYG 549
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB19B_ARATH (ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 46/128 (35.94%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 88 PGEAEAEDDNQIQKP-KFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEV 468 P +A+A+ I+ +FR + S + + N+ I G ++G SGSGKS+++ + R ++P +G V +DG+DI L++ SLR K+G++ Q PALF T+ DNI YG TE+EV Sbjct: 995 PDDADADPVETIRGDIEFRHVDFAYPSRPDVMVFRDFNLRIRAGHSQALVGASGSGKSSVIAMIERFYDPLAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAATIFDNIAYGKD----GATESEV 1118 HSP 2 Score: 73.559 bits (179), Expect = 5.415e-13 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 I + N+ P G + ++G SGSGKST++ + R ++P SG + LDG +I L + LR ++G++ Q PALF T+ +NI YG Sbjct: 382 IFRNFNIFFPSGKTVAVVGGSGSGKSTVVSLIERFYDPNSGQILLDGVEIKTLQLKFLREQIGLVNQEPALFATTILENILYG 464
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: YFIC_BACSU (Uncharacterized ABC transporter ATP-binding protein yfiC OS=Bacillus subtilis GN=yfiC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15 Identity = 43/126 (34.13%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 70 EHLLTVPGEAEAEDDNQ------IQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 E + V E E +D + IQ ++ D G LK + +P G + +GP+G+GK+T+ L R +EP G + +DG DI L SLR+ +G + Q LF+GT+ +NIRYG Sbjct: 338 ERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGPTGAGKTTVTNLLARFYEPNDGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYG 463
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_HALWD (Phosphate import ATP-binding protein pstB OS=Haloquadratum walsbyi (strain DSM 16790) GN=pstB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15 Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 55 RDEVREHLLTVPGEAEAEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPS-----GTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 R+E RE+ VP + +D + DD A L+GV+MEIP+ + +IGPSG GKST LR LNR+ + S G+V LD ++I ++++ LR++VGM+FQ P F ++ +NI YGP+ G Sbjct: 34 REEWREYSFDVPTKLGVDDLDVYY------------GDDQA--LEGVSMEIPEKSVTALIGPSGCGKSTFLRCLNRMNDRVSSARIDGSVTLDSQEIYQDGVNLVELRKRVGMVFQSPNPFPKSIRENIAYGPEKHG 156
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MSBA_RALSO (Lipid A export ATP-binding/permease protein msbA OS=Ralstonia solanacearum GN=msbA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 103 AEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 A D + + FR G DG L +++ + G I+ ++GPSGSGK+TL+ L R +EP SG + LDG + DL + LRR++ + Q LF T+A N+ YG Sbjct: 345 ARGDLRFEHVTFRYGP------DGRAALDSIDLHVKAGEIVALVGPSGSGKTTLVNLLPRFFEPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYG 447 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |