FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MSBA_CHRSD (Lipid A export ATP-binding/permease protein msbA OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=msbA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 133 KFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 +FR GE D A +LKG+++++P+G ++ I+G SGSGKSTL+ + R + P G V LD DI + + LR+++ ++ Q LF T+A NI YG Sbjct: 344 RFRYGE------DQAEVLKGIDLDVPQGEMIAIVGRSGSGKSTLVSLMPRFYRPTEGRVLLDDVDIQEYALSPLRQRIALVSQQVTLFNTTIAANIAYG 436
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: METN_CAUCR (Methionine import ATP-binding protein metN OS=Caulobacter crescentus GN=metN PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15 Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 172 GAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVL---SLRRKVGMLFQIPALFEG-TVADNIRYGPQLRGKKLTE 459 G P L GV++ + G + G+IG SG+GKSTL+R +N L P +G V +DG D+ L V +LRR+VGM+FQ L G TVA N+ + +L G+ E Sbjct: 15 GHPALSGVSLSVKAGEVFGVIGASGAGKSTLIRLINGLETPSAGQVIVDGDDVAALGVAGLRALRRRVGMIFQHFNLLSGKTVAQNVAFPLKLAGRPAAE 114
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: METN1_PSEAB (Methionine import ATP-binding protein metN 1 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metN1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15 Identity = 51/131 (38.93%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 112 DNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLD---VLSLRRKVGMLFQIPALFEG-TVADNIRYGPQLRG--KKLTENEVYKLLSL 486 D + P R+ L K G L+ +++EI +G + GIIG SG+GKS+L+R LNRL P G V +DG DI D +++LRR++GM+FQ L TV NI ++ G + E V LL L Sbjct: 21 DTRASTPHIRLHGLGKRYPGGVQALREIDLEIRRGEVFGIIGRSGAGKSSLIRTLNRLERPSEGQVLIDGEDIGGYDGQRLVALRRRIGMIFQHFNLMSAKTVRQNIALPLRVAGVPRARIEERVAGLLQL 151
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB26B_ARATH (ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana GN=ABCB26 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15 Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 163 SDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 S D +++ VN+ + G ++ I+G SGSGKSTL+ L +L+EP SG + LDG + +LDV LR+++G + Q P LF ++ NI+YG Sbjct: 466 SRDEVAVVQNVNISVHPGEVVAIVGLSGSGKSTLVNLLLQLYEPTSGQILLDGVPLKELDVKWLRQRIGYVGQEPKLFRTDISSNIKYG 554
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_SACD2 (Phosphate import ATP-binding protein pstB OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=pstB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 193 VNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEP-----PSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 V+++I K ++ +IGPSG GKST LR LNR+ + SG++ LDG DI D LDV+ LR +VGM+FQ P F ++ +N+ YGP++ G Sbjct: 64 VDLDIAKNQVIAMIGPSGCGKSTFLRCLNRMNDTIDICRVSGSITLDGMDIYDKQLDVVPLRARVGMVFQKPNPFPKSIYENVAYGPKIHG 154
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_MARMM (Phosphate import ATP-binding protein pstB OS=Maricaulis maris (strain MCS10) GN=pstB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 163 SDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVF-----LDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLL 480 S G L V+++IP + IGPSG GKST LR LNR+ + G V +DG++I D +D + LR VGM+FQ P F ++ DN+ YGP++ G LT E+ +++ Sbjct: 24 SYSGKQALHDVSIDIPDRSVTAFIGPSGCGKSTFLRCLNRMNDTIDGAVVGGSLTIDGQEINDKTIDPVVLRASVGMVFQKPNPFPKSIYDNVAYGPRIHGLALTRPELDEIV 136
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_BORGA (Phosphate import ATP-binding protein pstB OS=Borrelia garinii GN=pstB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 L +N++I K I +IGPSG GKST LR LNR+ + G V +G++I + D+L LRRK+GM+FQ P F ++ DNI YGP++ G K Sbjct: 29 LNEINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTK 124
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_BORAP (Phosphate import ATP-binding protein pstB OS=Borrelia afzelii (strain PKo) GN=pstB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 L +N++I K I +IGPSG GKST LR LNR+ + G V +G++I + D+L LRRK+GM+FQ P F ++ DNI YGP++ G K Sbjct: 29 LNEINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTK 124
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB1_VIBCH (Phosphate import ATP-binding protein pstB 1 OS=Vibrio cholerae GN=pstB1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGT-----VFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 L ++M IPKG + IGPSG GKSTLLR +NR+ + GT V L G++I D+DV +LRR+VGM+FQ P F ++ +N+ YG +L+G K Sbjct: 42 LSDISMRIPKGQVTAFIGPSGCGKSTLLRCINRMNDLVEGTRVEGEVKLHGKNIYHPDVDVPTLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGIK 137
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MSBA_RALEJ (Lipid A export ATP-binding/permease protein msbA OS=Ralstonia eutropha (strain JMP134) GN=msbA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 39/109 (35.78%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 103 AEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 A+ D ++ FR GE + P L+G+++ +P G ++ ++GPSGSGK+TL+ + R ++P G + LDG I D+ + LR ++ + Q LF TVA N+ YG Sbjct: 343 AKGDLVFERVGFRYGEGTR------PALEGIDIRVPAGEVVALVGPSGSGKTTLVNLVPRFFDPTDGRILLDGHAIGDIALRELRNQIAFVSQDVVLFNDTVAANVAYG 445 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |