FC932296

Overview
NameFC932296
Unique NameFC932296
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_METST (Putative O-sialoglycoprotein endopeptidase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=gcp PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.255e-45
Identity = 83/176 (47.16%), Postives = 121/176 (68.75%), Query Frame = 2
Query:  134 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSP 661
            MI LG EG+A K G+G+V  DG+IL+      +   G G  PRE A  H EH++PL++ AL+ + ++ ++ID + + +GPG+G  L+  A   R LSQ    P++ VNHC+ H+E+G++ TGA+DP+ LY SGGNTQ+I+Y  GRYRI GET+DIA+GNCLD+F+R + L +   P
Sbjct:    1 MICLGIEGTAEKCGIGIVDSDGNILATCGCQLYPEVG-GIHPREAANFHAEHIVPLIREALEESNLSINDIDLVSFAKGPGLGPALRTVATAARSLSQNIGVPLIGVNHCIGHVEIGKLTTGAKDPLTLYTSGGNTQIISYESGRYRIIGETLDIAIGNCLDQFSRDIGLGHPGGP 175          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_METM5 (Putative O-sialoglycoprotein endopeptidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=gcp PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.846e-45
Identity = 91/179 (50.84%), Postives = 122/179 (68.16%), Query Frame = 2
Query:  128 KRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPG 664
            K +I +GFEG+A K GVG++T +G +L N    Y TPP QG  PRE A HH E  + L+K AL    I  ++ID + ++ GPG+G  L+V A   R LS    KPI+ VNHC++H+E+G++ T A DP+ LYVSGGNTQV+AY+  +YR+ GET+DIA+GNCLD+FAR     N P PG
Sbjct:    5 KDLICIGFEGTAEKTGVGIITSNGEVLFNKTIIY-TPPVQGIHPREAADHHAETFVKLLKEALTVVPI--EKIDLVSFSLGPGLGPSLRVTATTARALSLSINKPIIGVNHCISHVEIGKLKTDALDPLTLYVSGGNTQVLAYTGKKYRVIGETLDIAIGNCLDQFAR---HCNMPHPG 177          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_METM7 (Putative O-sialoglycoprotein endopeptidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=gcp PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.023e-45
Identity = 91/179 (50.84%), Postives = 121/179 (67.60%), Query Frame = 2
Query:  128 KRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPG 664
            K +I +GFEG+A K GVG++T  G +L N    Y TPP QG  PRE A HH E  + L+K AL    I  ++ID + ++ GPG+G  L+V A   R LS    KPI+ VNHC++H+E+G++ T A DP+ LYVSGGNTQV+AY+  +YR+ GET+DIA+GNCLD+FAR     N P PG
Sbjct:    5 KDLICIGFEGTAEKTGVGIITSKGEVLFNKTIIY-TPPVQGIHPREAADHHAETFVKLLKEALTVVPI--EKIDLVSFSLGPGLGPSLRVTATTARALSLSINKPIIGVNHCISHVEIGKLKTDAVDPLTLYVSGGNTQVLAYTGKKYRVIGETLDIAIGNCLDQFAR---HCNMPHPG 177          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_METMP (Putative O-sialoglycoprotein endopeptidase OS=Methanococcus maripaludis GN=gcp PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.462e-44
Identity = 89/177 (50.28%), Postives = 119/177 (67.23%), Query Frame = 2
Query:  134 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPG 664
            +I +GFEG+A K GVG++T  G +L N    Y TPP QG  PRE A HH E  + L+K AL    +  ++ID + ++ GPG+G  L+V A   R LS    KPI+ VNHC+ H+E+G++ T A DP+ LYVSGGNTQV+AY+  +YR+ GET+DIA+GNCLD+FAR   L   P PG
Sbjct:    8 LICIGFEGTAEKSGVGIITSKGEVLFNKTIIY-TPPVQGIHPREAADHHAETFVKLLKEALNEVPL--EKIDLVSFSLGPGLGPSLRVTATTARALSLSINKPIIGVNHCIGHVEIGKLTTDAVDPLTLYVSGGNTQVLAYTGKKYRVIGETLDIAIGNCLDQFARHCNL---PHPG 178          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_METTH (Putative O-sialoglycoprotein endopeptidase OS=Methanobacterium thermoautotrophicum GN=gcp PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44
Identity = 95/184 (51.63%), Postives = 121/184 (65.76%), Query Frame = 2
Query:  134 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLA 685
            M+ LG EG+A K GVG+V   G++LS  R     P   G  PRE A+HH + +  L+  A + AG+   EI  + ++RGPG+G  L+  A   R L+     PIV VNHC+ HIE+GR+ TGA DPV LYVSGGNTQVIA++EGRYR+FGET+DIAVGN LD+FAR   L +   P   IEQLA
Sbjct:    1 MLCLGIEGTAEKTGVGIVDEAGNVLSL-RGKPLIPEKGGIHPREAAEHHAKWIPRLIAEACRDAGVELGEIGLISFSRGPGLGPALRTVATAARTLALSLDVPIVGVNHCIGHIEIGRLTTGASDPVSLYVSGGNTQVIAFNEGRYRVFGETLDIAVGNMLDQFARESGLGHPGGP--VIEQLA 181          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_METM6 (Putative O-sialoglycoprotein endopeptidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=gcp PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44
Identity = 90/179 (50.28%), Postives = 121/179 (67.60%), Query Frame = 2
Query:  128 KRMIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPG 664
            K +I +GFEG+A K GVG++   G +L N    Y TPP QG  PRE A HH E  + L+K AL  A +  ++ID + ++ GPG+G  L+V A   R LS    KPI+ VNHC++H+E+G++ T A DP+ LYVSGGNTQV+AY+  +YR+ GET+DIA+GNCLD+FAR     N P PG
Sbjct:    5 KDLICIGFEGTAEKTGVGIINSKGEVLFNKTIIY-TPPVQGIHPREAADHHAETFVKLLKEAL--AVVPLEKIDLVSFSLGPGLGPSLRVTATTARALSLSINKPIIGVNHCISHVEIGKLKTDAVDPLTLYVSGGNTQVLAYTGKKYRVIGETLDIAIGNCLDQFAR---HCNMPHPG 177          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_CALMQ (Putative O-sialoglycoprotein endopeptidase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=gcp PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.554e-44
Identity = 90/176 (51.14%), Postives = 118/176 (67.05%), Query Frame = 2
Query:  134 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSP 661
            MI LG E +A+ IGVG+V  D  +L+N   TY  P G G  PRE A HH      LVK AL  A +   ++D + +++GPG+G  L+V A V R ++  + KP+V V+H VAHIE+ ++ TGA+DP+VL VSGG+T V AYS GRYR+FGET+DI+VGNCLD FAR L L N   P
Sbjct:    1 MIILGIESTAHTIGVGIVN-DNEVLANENETYTPPQGSGIHPREAADHHALKASHLVKRALDKAEVKLSDLDAVAFSQGPGLGPALRVGATVARFIAIKYGKPLVPVHHGVAHIEIAKMTTGAKDPLVLLVSGGHTMVTAYSGGRYRVFGETMDISVGNCLDMFARFLGLPNPGVP 175          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_PYRKO (Putative O-sialoglycoprotein endopeptidase OS=Pyrococcus kodakaraensis GN=gcp PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.254e-44
Identity = 90/184 (48.91%), Postives = 129/184 (70.11%), Query Frame = 2
Query:  134 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLA 685
            MIALG EG+A+ +G+G+VT + S+L+N   T  T  G G  P+E A+HH   + PL++ AL+TAG+T +++D + +++GPG+G  L+V A   R L+  + KPIV VNHC+AH+E+ ++  G +DPV LYVSGGNTQV+A   GRYR+FGET+DI +GN +D FAR L +     P   IE+LA
Sbjct:    1 MIALGIEGTAHTLGIGIVT-EKSVLANVFDTLTTEKG-GIHPKEAAEHHARLLKPLLRKALETAGVTMEDVDLIAFSQGPGLGPALRVVATAARALAIKYNKPIVGVNHCIAHVEITKMF-GVKDPVGLYVSGGNTQVLALEGGRYRVFGETLDIGIGNAIDTFARELGIGFPGGP--KIEKLA 179          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_METVS (Putative O-sialoglycoprotein endopeptidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gcp PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44
Identity = 90/185 (48.65%), Postives = 127/185 (68.65%), Query Frame = 2
Query:  134 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITP-DEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLA 685
            +I +G EG+A K GVGV+T +G +L N +   +TP  QG  PRE A HH E  + L+    + +G+ P D+ID + +++GPG+G  L+V A   R L+   KKPI+ VNHCV+H+E+G++ T A DP+ LYVSGGNTQV+AY+  +YR+ GET+DIA+GNCLD+FAR   LS+    G  +EQ A
Sbjct:    7 LICIGLEGTAEKTGVGVITSNGEVLFN-KTVIYTPKIQGIHPREAADHHAETFIKLLN---EVSGVIPLDKIDLVSFSQGPGLGPSLRVTATTGRALALSLKKPIIGVNHCVSHVEIGKLKTDALDPLTLYVSGGNTQVLAYTGKKYRVIGETLDIAIGNCLDQFARYCNLSH--PGGVFVEQYA 185          
BLAST of FC932296 vs. ExPASy Swiss-Prot
Match: GCP_THEGJ (Putative O-sialoglycoprotein endopeptidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gcp PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.616e-43
Identity = 90/184 (48.91%), Postives = 128/184 (69.57%), Query Frame = 2
Query:  134 MIALGFEGSANKIGVGVVTLDGSILSNPRHTYFTPPGQGFLPRETAQHHLEHVLPLVKSALKTAGITPDEIDCLCYTRGPGMGAPLQVAAVVVRVLSQLWKKPIVAVNHCVAHIEMGRIVTGAEDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLA 685
            MIALG EG+A+ +G+G+VT +  +L+N   T  T  G G  P+E A+HH   + PL++ AL+TAGIT +++D + +++GPG+G  L+V A   R L+  + KPIV VNHC+AH+E+ ++  G +DPV LYVSGGNTQV+A   GRYR+FGET+DI +GN +D FAR L +     P   IE+LA
Sbjct:    1 MIALGIEGTAHTLGIGIVT-EKKVLANVFDTLTTEKG-GIHPKEAAEHHARLLKPLLRKALQTAGITMEDVDVIAFSQGPGLGPALRVVATAARALAIKYNKPIVGVNHCIAHVEITKMF-GVKDPVGLYVSGGNTQVLALEGGRYRVFGETLDIGIGNAIDTFARELGIGFPGGP--KIEKLA 179          
The following BLAST results are available for this feature:
BLAST of FC932296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GCP_METST2.255e-4547.16Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METM53.846e-4550.84Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METM75.023e-4550.84Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METMP1.462e-4450.28Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METTH1.909e-4451.63Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METM62.493e-4450.28Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_CALMQ5.554e-4451.14Putative O-sialoglycoprotein endopeptidase OS=Cald... [more]
GCP_PYRKO7.254e-4448.91Putative O-sialoglycoprotein endopeptidase OS=Pyro... [more]
GCP_METVS9.473e-4448.65Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_THEGJ1.616e-4348.91Putative O-sialoglycoprotein endopeptidase OS=Ther... [more]

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Properties
Property NameValue
Genbank descriptionC34207A12EF PostHarveN Citrus clementina cDNA clone C34207A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932296 ID=FC932296; Name=FC932296; organism=Citrus clementina; type=EST; length=685bp
CCTAACGCATTCTCATTCGCCTCCCTCCTCCTCGCCCTCCACTCACTGTC
ACACTTCGCCGCTGGCTGCTGTCCTTATCGCCGTCCTGTCGTCGCCAACA
GTTGCAAAACCCCAAGGGTTAAAGATGAAGAGGATGATAGCTCTTGGATT
TGAAGGTTCGGCTAACAAGATTGGTGTTGGGGTTGTTACGTTAGATGGAA
GTATTCTATCAAATCCACGCCACACATATTTCACGCCACCTGGGCAGGGA
TTTCTTCCACGAGAAACTGCTCAACACCATCTAGAACACGTTCTTCCACT
TGTCAAATCTGCTTTGAAAACTGCTGGAATAACCCCAGATGAAATTGATT
GCCTTTGTTACACCAGGGGTCCGGGCATGGGAGCGCCACTGCAAGTTGCT
GCTGTTGTTGTCCGGGTTCTATCTCAGCTGTGGAAGAAGCCAATTGTTGC
TGTTAATCACTGCGTGGCACATATTGAGATGGGGAGGATTGTGACTGGAG
CGGAGGATCCTGTTGTGTTGTATGTCAGCGGTGGAAATACCCAGGTGATT
GCTTATAGTGAAGGAAGGTATCGGATCTTTGGGGAGACTATCGATATTGC
TGTGGGTAACTGCTTGGATCGGTTTGCAAGGGTTTTAACACTGTCCAATG
ATCCAAGCCCTGGATACAACATTGAGCAGCTGGCA
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