FC932302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_CORA7 (3-isopropylmalate dehydrogenase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=leuB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 62/212 (29.25%), Postives = 99/212 (46.70%), Query Frame = 1 Query: 52 LRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSP--IVALRKKLDLYANVRPVK----TTAGNTNGKPIDLVIVRENTEDLYVKEERTI-EGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRET 666 +++ +I GDGIG EV ++L ++ + + D D G + + G L D +L+ E D L GA+ +P G ++ +R LD + N+RP K +T+ N ID V+VRE TE LY T+ EG +VA + + + R+ A + A+ R+K VT+ HK+NVL GL++ T Sbjct: 1 MKLAVIGGDGIGPEVTAEALKVLRAVRQDVEV----TDYDLGARRYLRNGELLSDADFASLR-EHDAILLGAIGAPGEVPPGVLERGLLLKMRFALDHHVNLRPSKLYPTSTSPLANPGDIDFVVVREGTEGLYCGNGGTLREGTEHEVASEVSQNTRFGVERVVRDAFQRAMGRRK--------------HVTLVHKTNVLVNAGGLWQRT 193
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_BACLD (3-isopropylmalate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=leuB PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 71/218 (32.57%), Postives = 99/218 (45.41%), Query Frame = 1 Query: 55 RIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSP----STKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKP--------IDLVIVRENTEDLYV-KEERTIEGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRETA 669 RI L+PGDGIG EV+ A +L+S+ +F F G + G LP++TV K D L GAV P + ++A+RK+LDL+AN+RPVK P +D VIVRE T LY K NG+ EA+ + S + IR A +R + VT K+NVL ++ L+R+TA Sbjct: 4 RIALLPGDGIGPEVLDAAVDVLKSVAEHYQHEFEFEYGLIGGAAIDEAGAPLPEETVAAC-KAADAILLGAVGGPKWDQNPSELRPEKGLLAIRKQLDLFANLRPVKVFESLAGASPLKTEYIEGVDFVIVRELTGGLYFGKPSEQYVNQNGE-EEAVDTLFYKKS-----------EMERVIREAFQMAQSR-KGKVTSVDKANVL-ESSKLWRKTA 206
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: TTUC_PSEPU (Tartrate dehydrogenase/decarboxylase OS=Pseudomonas putida PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 53/141 (37.59%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 43 ARTLRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLD-AGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSS---PIVALRKKLDLYANVRPVKTTAG------NTNGKPIDLVIVRENTEDLY 435 A + RI IPGDGIG EV+P G R+LE+ L F + A + + + G +PD + L K+ D FGAV P KV + S ++ R++ D Y N+RPV+ G N ID V+VRENTE Y Sbjct: 3 AHSFRIAAIPGDGIGLEVLPEGIRVLEAAALKHGLALEFDTFEWASCDYYLQHGKMMPDDWAEQL-KQYDAIYFGAVDWPD-KVPDHISLWGSLLKFRREFDQYVNIRPVRLFPGVPCALANRKVGDIDFVVVRENTEGEY 141
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_CORDI (3-isopropylmalate dehydrogenase OS=Corynebacterium diphtheriae GN=leuB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 61/212 (28.77%), Postives = 99/212 (46.70%), Query Frame = 1 Query: 52 LRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSP--IVALRKKLDLYANVRPVK----TTAGNTNGKPIDLVIVRENTEDLYVKEERTI-EGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRET 666 +++ +I GDGIG EV ++L ++ + + D D G + + G L D + +L+ E D L GA+ +P G ++ +R LD + N+RP K T+ N ID V+VRE TE LY T+ EG ++A + + + + R+ A E A R+K +T+ HK+NVL GL++ T Sbjct: 1 MKLAVIGGDGIGPEVTAEALKVLNAVRDDIEV----TDYDLGARRYLRNGELLADADLVSLR-EHDAILLGAIGAPGEVPPGVLERGLLLKMRFALDHHVNLRPSKLYPTATSPLANPGDIDFVVVREGTEGLYCGNGGTLREGTPHEIASEVSQNTRYGVERVVRDAFERAQNRKK--------------HLTLVHKTNVLVNAGGLWQRT 193
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVY (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=leuB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 59/195 (30.26%), Postives = 92/195 (47.18%), Query Frame = 1 Query: 46 RTLRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTK-VAGYSSP----IVALRKKLDLYANVRPVKTTAG---------NTNGKPIDLVIVRENTEDLYVKEERTIEGPNGKVAEAIKRISEHASF-RISNIAGEIA-LRRQKIRSASPA 582 +T +I ++PGDGIG EV+ ++L+++ + F + D G G LP TV T +E D LFG+V P + + P ++ LRK L+ N+RP + +G + +G+ D+V+VRE T +Y + + EG I RI+ IA E A LRR+K+ S A Sbjct: 4 KTYKIAVLPGDGIGPEVMAQAHKVLDAIEKKHAIHFEREEHDVGGIAIDNHGCPLPQSTV-TACEESDAVLFGSVGGPKWEHLPPNDQPERGALLPLRKHFQLFCNLRPAQIHSGLEAFSPLRADISGRGFDIVVVRELTGGIYFGQPKGREGEGANEKAYDTEIYHRFEIERIAKIAFESARLRRKKVCSIDKA 197
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVU (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus GN=leuB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 59/195 (30.26%), Postives = 92/195 (47.18%), Query Frame = 1 Query: 46 RTLRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTK-VAGYSSP----IVALRKKLDLYANVRPVKTTAG---------NTNGKPIDLVIVRENTEDLYVKEERTIEGPNGKVAEAIKRISEHASF-RISNIAGEIA-LRRQKIRSASPA 582 +T +I ++PGDGIG EV+ ++L+++ + F + D G G LP TV T +E D LFG+V P + + P ++ LRK L+ N+RP + +G + +G+ D+V+VRE T +Y + + EG I RI+ IA E A LRR+K+ S A Sbjct: 4 KTYKIAVLPGDGIGPEVMAQAHKVLDAIEKKHAIHFEREEHDVGGIAIDNHGCPLPQSTV-TACEESDAVLFGSVGGPKWEHLPPNDQPERGALLPLRKHFQLFCNLRPAQIHSGLEAFSPLRADISGRGFDIVVVRELTGGIYFGQPKGREGEGANEKAYDTEIYHRFEIERIAKIAFESARLRRKKVCSIDKA 197
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_THETN (3-isopropylmalate dehydrogenase OS=Thermoanaerobacter tengcongensis GN=leuB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 72/226 (31.86%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 55 RIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPS-TKVAGYSSP---IVALRKKLDLYANVRPVKTTAGNTNGKP---------IDLVIVRENTEDLYVKEERTIEGPNGKVAEAI--------KRISEHASF-RISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRET 666 RI ++PGDGIG EVI G ++L+++ L+F G E K G P++T + D L GAV P + G P ++ALRK L +YAN+RP + P +D+++VRE T +Y GP GK EAI + E RI+ IA E ALRR+K +T K+NVL ++ L+R+T Sbjct: 3 RIAVLPGDGIGPEVIEEGLKVLKAVEEKYGLRFDIKKYPFGGEAIDKYGEPYPEETRNGCLSS-DAVLLGAVGGPKWDGLEGDKRPEAGLLALRKSLGVYANLRPAVLYPSLKDASPLKNELLEKGLDILVVRELTGGIYF-------GPRGK--EAIGYGFRAYDTEVYETQEIERIAVIAFEAALRRRK--------------KITSVDKANVL-ESSRLWRKT 203
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_SYMTH (3-isopropylmalate dehydrogenase OS=Symbiobacterium thermophilum GN=leuB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 59/189 (31.22%), Postives = 89/189 (47.09%), Query Frame = 1 Query: 40 AARTLRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGY----SSPIVALRKKLDLYANVRPV------KTTAGNTN---GKPIDLVIVRENTEDLYVKEERTIEG-PNGKVAEAIKRISEHASF-RISNIAGEIALRRQK 561 A T I +PGDGIG EV +L++ ++ + F + G + GT PD+T D + D LFGAV P + + + ++A+RK+ DLYAN+RP+ K + N G +D +IVRE +Y E R IE P+G + A RI+ + EIA R++ Sbjct: 2 AQPTYHIACLPGDGIGPEVTRGAVTVLQAAAAAYGFRLEFSEYLVGGAAYDAVGTPFPDETRDACDR-ADAILFGAVGGPRYEGLPWDLRPEAGLLAIRKRYDLYANLRPILLYPPLKDASPLKNEIIGGGVDFIIVRELVGGIYFGEPRGIETLPDGTRRGVNTEVYTDAEIARIARMGFEIARGRRR 189
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_BURPS (3-isopropylmalate dehydrogenase OS=Burkholderia pseudomallei GN=leuB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 52 LRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVS----SPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKP--------IDLVIVRENTEDLYVKEERTIE-GPNGKVAEA-----IKRISEHASFRISNIAGEIALRRQK 561 ++I ++PGDGIG E++ ++L +L L+ + V AGYE +G LPD T+ L KE D LFGAV + I+ LRK L+L+AN RP + P +D++IVRE D+Y + R + P+G A A R SE RI+++A + A +R K Sbjct: 1 MKIAVLPGDGIGPEIVNEAVKVLNALDEKFELEQAPVG-GAGYEA---SGHPLPDATL-ALAKEADAILFGAVGDWKYDSLERALRPEQAILGLRKHLELFANFRPAICYPQLVDASPLKPELVAGLDILIVRELNGDIYFGQPRGVRAAPDGPFAGAREGFDTMRYSEPEVRRIAHVAFQAARKRAK 183
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_BURP1 (3-isopropylmalate dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=leuB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 52 LRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVS----SPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKP--------IDLVIVRENTEDLYVKEERTIE-GPNGKVAEA-----IKRISEHASFRISNIAGEIALRRQK 561 ++I ++PGDGIG E++ ++L +L L+ + V AGYE +G LPD T+ L KE D LFGAV + I+ LRK L+L+AN RP + P +D++IVRE D+Y + R + P+G A A R SE RI+++A + A +R K Sbjct: 1 MKIAVLPGDGIGPEIVNEAVKVLNALDEKFELEQAPVG-GAGYEA---SGHPLPDATL-ALAKEADAILFGAVGDWKYDSLERALRPEQAILGLRKHLELFANFRPAICYPQLVDASPLKPELVAGLDILIVRELNGDIYFGQPRGVRAAPDGPFAGAREGFDTMRYSEPEVRRIAHVAFQAARKRAK 183 The following BLAST results are available for this feature:
BLAST of FC932302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932302 ID=FC932302; Name=FC932302; organism=Citrus clementina; type=EST; length=680bpback to top |