FC932304

Overview
NameFC932304
Unique NameFC932304
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length548
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI_HUMAN (Maleylacetoacetate isomerase OS=Homo sapiens GN=GSTZ1 PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.941e-26
Identity = 67/169 (39.64%), Postives = 98/169 (57.99%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 509
            +F  +NP+  VP L            I+ YLEE  P P LLP D K +A     +++++  IQPLQNL+V+K +    G + +  WA+  I  GF ALE++L+  AG Y  GDEV +ADLCL PQ+ A   RF +D+T +P +  +++    L AFQ + P +QPD P+
Sbjct:   49 DFQALNPMKQVPTLKIDGITIHQSLAIIEYLEEMRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLKQV----GEEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQV-ANAERFKVDLTPYPTISSINKRLLVLEAFQVSHPCRQPDTPT 212          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.647e-26
Identity = 67/163 (41.10%), Postives = 97/163 (59.51%), Query Frame = 3
Query:   12 KINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPD 500
            +INP   VP              I+ YLEE +P  PLLP D   +A     + +V+S IQPL NL V++ + +K  A     +AK  + +G  ALE LLK ++GKYA GD+V +ADL + P +Y+A NRFNLD++ +P + R++E  + +PAF  A P+ QPD
Sbjct:   49 EINPAAKVPTFVVDGQVITESLAIIEYLEETHPDVPLLPKDPIKRAHARAISLLVASGIQPLHNLKVLQLLNKKE-AGFGGQFAKQFVVEGLTALEILLKQHSGKYAVGDDVTIADLSIPPLIYSA-NRFNLDLSPYPTVNRINETLADIPAFIAAHPDNQPD 209          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI_VIBCH (Probable maleylacetoacetate isomerase OS=Vibrio cholerae GN=maiA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.146e-25
Identity = 65/172 (37.79%), Postives = 98/172 (56.98%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANI---VSSSIQPLQNLAVVKYIEEKAGA--DERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDA 503
            EF ++NP   +P L            I+ YL+E YP P L+P   +G A  YQ   +   +++ I P+ NL +++Y+  K G   +E++ W +  I KGF  LE+ L+  AG+Y  G+ + L D+CL PQ+Y A  RF+LDM+++P L ++      LPAF  A PE QPDA
Sbjct:   47 EFHRLNPSELIPVLIDGELCLNQSLAIIEYLDETYPAPRLIPE--RG-AERYQVKALALDIAADIHPINNLRILQYLTAKLGVADEEKNRWYRHWIDKGFQGLEEKLRHTAGEYCVGNRLSLVDVCLVPQVYNA-ERFDLDMSRYPTLQQIAARLRALPAFAQAAPENQPDA 214          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI_PSEAE (Maleylacetoacetate isomerase OS=Pseudomonas aeruginosa GN=maiA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.219e-20
Identity = 65/172 (37.79%), Postives = 93/172 (54.07%), Query Frame = 3
Query:    6 FLKINPIGYVPALXXXXXXXXXXXX-ILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDI--WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 512
            +L +NP G VPAL             I+ YLEE+YPQP LL SD   +A     A +V   I PL N +V+  + +  G DE  +  W    +G+G AA+E+L+ D    +  GD   LAD+ L PQLYAA  RF + +  +P + R+ +  +  PAF+ A P  QPD P++
Sbjct:   45 YLALNPQGRVPALQVDEGELLIQSPAIIEYLEERYPQPALLSSDPLRRARERGVAALVGCDIHPLHNASVLNLLRQ-WGHDEEQVRQWIGHWVGQGLAAVEQLIGDQG--WCFGDRPGLADVYLVPQLYAA-ERFGVALDAWPRIRRVADLAAAHPAFRQAHPANQPDTPAA 212          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI_RHIME (Maleylacetoacetate isomerase OS=Rhizobium meliloti GN=maiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14
Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADE--RDIWAKTHIGKGFAALEKLLKDYA-GKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEK 491
            E L  NP G VP L            I+ YL E      LLP+    +      +  V+  I P+ NL VV  +   AG  E  R  W +  IG+G AA E++L   A G +  GD   +ADLCL PQ+Y A  R+++D+   PLL+ +    + + AFQ A P++
Sbjct:   46 EHLARNPQGLVPVLDIDGERLTQSLAIIEYLAETRDGTGLLPAHPIDRQRVRALSYAVAMDIHPVCNLGVVARVMAGAGDGEAARREWMQKFIGEGLAAFERMLDHPATGAFCHGDRPTMADLCLVPQVYNA-RRWDVDLAACPLLVAIDRRCAGIDAFQRAHPDR 210          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI_EMENI (Maleylacetoacetate isomerase OS=Emericella nidulans GN=maiA PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14
Identity = 51/146 (34.93%), Postives = 83/146 (56.85%), Query Frame = 3
Query:   84 LMYLEEKYPQPP--LLP--SDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 509
            L YL+E +P  P  LLP  S+ + +A+    A+I++  IQP+ NL +++ +    G D R  W+K  I  GFAA E + +D AG ++ GD + +AD+CL P ++ A  R  +++ Q+P + R+ EA  K  A +      Q D P+
Sbjct:   84 LEYLDEAFPDNPNPLLPPISNPQQRALVRSLASIIACDIQPVTNLRILQRVAP-FGVD-RAAWSKDLIEAGFAAYEAIARDSAGVFSVGDTITMADVCLIPAVWGA-ERAGVNLGQYPTIKRVAEALEKENAVKEGHWRTQQDTPT 226          
The following BLAST results are available for this feature:
BLAST of FC932304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
MAAI_HUMAN1.941e-2639.64Maleylacetoacetate isomerase OS=Homo sapiens GN=GS... [more]
MAAI_CAEEL5.647e-2641.10Probable maleylacetoacetate isomerase OS=Caenorhab... [more]
MAAI_VIBCH2.146e-2537.79Probable maleylacetoacetate isomerase OS=Vibrio ch... [more]
MAAI_PSEAE1.219e-2037.79Maleylacetoacetate isomerase OS=Pseudomonas aerugi... [more]
MAAI_RHIME1.305e-1434.34Maleylacetoacetate isomerase OS=Rhizobium meliloti... [more]
MAAI_EMENI1.305e-1434.93Maleylacetoacetate isomerase OS=Emericella nidulan... [more]

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Properties
Property NameValue
Genbank descriptionC34207B08EF PostHarveN Citrus clementina cDNA clone C34207B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932304 ID=FC932304; Name=FC932304; organism=Citrus clementina; type=EST; length=548bp
CTGAGTTTTTGAAGATCAACCCTATTGGCTACGTGCCGGCTTTGGTTGAT
GGAGATTTTGTTGTATCTGATTCTTTTGTCATTTTAATGTACCTGGAAGA
GAAGTATCCTCAGCCTCCATTGTTGCCTTCTGATCTTAAGGGAAAAGCTA
TCAATTATCAGGCTGCAAATATTGTTTCCTCGAGCATACAGCCTCTTCAG
AATCTTGCTGTAGTGAAGTACATTGAGGAAAAAGCTGGTGCAGATGAGAG
AGACATCTGGGCTAAAACTCACATTGGAAAAGGCTTTGCGGCACTTGAGA
AGCTGCTAAAAGACTATGCTGGGAAATATGCAACTGGAGATGAAGTTTTC
CTGGCAGATTTGTGTCTGGCACCACAGCTTTATGCGGCGGTCAACAGGTT
CAACCTTGACATGACCCAATTCCCTCTTTTGCTGAGGTTGCATGAGGCAT
ACAGCAAGCTACCGGCATTTCAAAATGCTGTACCAGAAAAACAACCGGAT
GCCCCTTCATCATGAAAGTATAGTTATAACNAATACTGAGGCAGTATG
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