FC932314

Overview
NameFC932314
Unique NameFC932314
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query:  532 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            YRGVR+RPWGK+AAEIRD TR+G+RVWLGTFDT            F L+G
Sbjct:   82 YRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKG 131          
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 31/50 (62.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query:  532 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            YRGVRRRPWGK+AAEIRDP + G RVWLGT++T            FQLRG
Sbjct:   92 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRG 141          
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1
Query:  529 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            HYRGVRRRPWGK+AAEIRDP + G RVWLGT++T            +++RG
Sbjct:  104 HYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRG 154          
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 31/50 (62.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query:  532 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            YRGVRRRPWGKYAAEIRD  R G RVWLGTF+T            F++RG
Sbjct:   59 YRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRG 108          
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query:  532 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            +RGVRRRPWGK+AAEIRDP+R G R+WLGTF+T            F LRG
Sbjct:   20 FRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRG 69          
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query:  532 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            YRGVRRRPWGK+AAEIRD TR G+RVWLGTF++            F +RG
Sbjct:   82 YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRG 131          
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 1
Query:  529 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            HYRGVR+RPWGK+AAEIRDP + G RVWLGT++T            +++RG
Sbjct:   98 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRG 148          
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 1
Query:  529 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            HYRGVR+RPWGK+AAEIRDP + G RVWLGT++T            +++RG
Sbjct:  102 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRG 152          
BLAST of FC932314 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 1
Query:  529 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRG 681
            HYRGVR+RPWGK+AAEIRDP + G RVWLGT+++            F++RG
Sbjct:  106 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRG 156          
The following BLAST results are available for this feature:
BLAST of FC932314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ERF94_ARATH9.479e-1262.00Ethylene-responsive transcription factor ERF094 OS... [more]
ERF99_ARATH1.238e-1162.00Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF1_TOBAC1.238e-1156.86Ethylene-responsive transcription factor 1 OS=Nico... [more]
PTI5_SOLLC2.758e-1162.00Pathogenesis-related genes transcriptional activat... [more]
ERF98_ARATH3.602e-1160.00Ethylene-responsive transcription factor ERF098 OS... [more]
ERF92_ARATH3.602e-1160.00Ethylene-responsive transcription factor 1B OS=Ara... [more]
ERF2_TOBAC3.602e-1154.90Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY3.602e-1154.90Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF1_SOLLC4.704e-1154.90Ethylene-responsive transcription factor 1 OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionC34207C06EF PostHarveN Citrus clementina cDNA clone C34207C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932314 ID=FC932314; Name=FC932314; organism=Citrus clementina; type=EST; length=681bp
CATACTCAAAACTCTTCAATATTTTTAAGATTCAAAAACTCTATAAGGGA
CACAGCTTGCTTAGTTGCCATGGCTACACCAATTGAAAAATCAGCGCTCG
AGTTTATCGAGCAACATTTGTTCGGCGAAAATTCTCCTATTGCGGGATTT
AGTTCGAGTTTGTCGAGCGACACTTGCTCGCAATCGCAAACGTCCAGCTC
TGCATCTTCAGATCGTAGTTTCTTCAACGATGCCGTTTTCTTCGACTATG
AATCCAAACCTCAAATCATTGATCTTGTTACACCGCAACCCACTAATACT
TGCTCTGAATTGACTAACGATTTCTTTGAATTTGACATTAGACCTCAAAT
CCAATCGCAACCGAGCAATTGTAGCTCGGAATTCGAACCCAAGCCCAAAA
TATCTCCAAATTCATCCTCTCAATCGTCTCGCAAACCGTCGCTGAAAATC
TCAGTGCCTAAGAAAGCCGAAGGTCATCATTTCACCAACCGGAAAAGCAA
GGCCAAACCTGAGAGTTCGGAAGAAAAGCATTACAGAGGAGTTCGACGGA
GGCCGTGGGGAAAGTACGCGGCCGAGATCCGAGATCCTACCCGGAGAGGC
GTACGTGTCTGGCTGGGGACATTTGACACGGCCATTGAAGCAGCTAGGGC
GTGCGACCGTGCCGCTTTCCAGCTGCGCGGC
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