FC932317

Overview
NameFC932317
Unique NameFC932317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 81/222 (36.49%), Postives = 111/222 (50.00%), Query Frame = 3
Query:  114 KFDITNNCPDTVWAAAV--------PGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCN-GLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFDVPMEFSSVSPSCN-RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFCP 713
            K   TNNCP T+W   +        P  G  L    + T+  +   K  R WART+C  + SGK  CET DC+ G + C G GA P  +L E  +     MDF D+S +DG+++P+  ++   + + +   C AN+   CP EL+V G       C   C  F   +YCC         C  T +S+ FK +CP  YSY  DD+TSTFTC    DY + FCP
Sbjct:   24 KITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKG-RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.335e-33
Identity = 86/218 (39.45%), Postives = 109/218 (50.00%), Query Frame = 3
Query:  129 NNCPDTVWAAAVPGGGRQLDK------GQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCN-GLLECQGY-GAAPNTLAEYALKQFNDMDFIDMSNIDGFDVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCN-----SGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFCP 713
            NNCP TVW A+   G  QL         Q       P   + R WART+C  DASGK  CET DC+ G L C G  G  P TLAE+ +      DF D+S +DGF++PM   SV+P       ++  C AN+   CP+EL+  G       C   C  F   +YCC         C PT +S+ F ++CPD YSY  DD    FTC  G +Y + FCP
Sbjct:   30 NNCPYTVWPASF--GNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.274e-33
Identity = 87/223 (39.01%), Postives = 109/223 (48.88%), Query Frame = 3
Query:  129 NNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAA-----------RIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFDVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFCP 713
            NNCP  VW    PG      K Q  T   E  ++A+           R WART C  DASGK  C T DC +G + C G GA P  TLAE+ +      DF D+S +DGF++PM   SV+P       +   C AN+   CP+EL+  G       C   C  F T +YCC         C PT +S+ F + CPD YSY  DD   TFTC  G +Y + FCP
Sbjct:   30 NNCPYMVW----PGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.106e-32
Identity = 85/225 (37.78%), Postives = 109/225 (48.44%), Query Frame = 3
Query:  114 KFDITNNCPDTVWAAAVPGG--------GRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFDVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFCP 713
            K   TN C  TVW   + G         G +L  G + ++ A P   + R + RT+C  DASGK  C T DC +G + C G GAAP  TL E  +      DF D+S +DGF++PM   SV+P       +   C A+I   CP  L+V G       C   C  F   +YCC   N     C P  +SK FK +CP  YSY  DD +STFTC     Y + FCP
Sbjct:   26 KITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDA-PSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPM---SVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.930e-31
Identity = 78/216 (36.11%), Postives = 107/216 (49.54%), Query Frame = 3
Query:  141 DTVWAAAVPGGGR--------QLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFDVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFCP 713
            +TVW   + G  +        +L    + ++ A P   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGF++PM   SV+P       +   C AN+   CP +L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G DY + FCP
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDA-PSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.930e-31
Identity = 77/200 (38.50%), Postives = 94/200 (47.00%), Query Frame = 3
Query:  117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFDVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFCP 713
            F ITN C  TVW AA P GGG QL  GQTWTI    GT + R+W RT C FD SG+G C TGDC G L C   G  P TLAE+ +      DF D+S IDG++V M FS           C++ +   C +                                      RCPD Y +P+D+ T T  C   ++Y VVFCP
Sbjct:   29 FTITNRCSFTVWPAATPVGGGVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIG--GSQDFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHACSGNSNYQVVFCP 177          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30
Identity = 80/217 (36.87%), Postives = 103/217 (47.47%), Query Frame = 3
Query:  129 NNCPDTVWAAAVPGGGRQLDKGQTWTITAE-------PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGA-APNTLAEYALKQFNDMDFIDMSNIDGFDVPMEFSSV--SPSCNRVIKCTANILGECPNELKVPG-------GCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFCP 713
            N C   VW    P  G+ L  G  + + A        P   + R W R  C FD SG+G C TGDC G L C G G   P TLAE  L    ++DF D+S +DG+++ M    V  S  C+    C +++   CP  L+V          C   C  F + +YCC     N  +C PT +SK FK  CP  YSY  DD TS  TC +  +Y V FCP
Sbjct:   27 NKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP--ELDFYDVSLVDGYNLAMSIMPVKGSGQCS-YAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC-SKANYIVTFCP 239          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.020e-30
Identity = 79/223 (35.43%), Postives = 113/223 (50.67%), Query Frame = 3
Query:  123 ITNNCPDTVWAAAVPGGGRQ-LDKG----QTWTITAEPGTKA---ARIWARTKCQFDASGKGKCETGDCNGLLECQGYG-AAPNTLAEYALKQFN-DMDFIDMSNIDGFDVPMEFSSVSPSCNR----VIKCTANILGECPNELKVPG--------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFC 710
            + NNCP T+W A  P  G   L++G     + T  + P   A    RIWART C +   GK  C TGDC G +EC G G AAP TLA++ L   + D     +S +DGF++P+   +V+P   +    V+ C AN+L  CP  L+           GC   C  FK+DE+CC +       C P+ +S+FFK  CP  ++Y  D  +    C +  +  V+FC
Sbjct:   33 LVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPL---TVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28
Identity = 77/219 (35.16%), Postives = 102/219 (46.58%), Query Frame = 3
Query:  123 ITNNCPDTVWAAAV--------PGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQG-YGAAPNTLAEYAL-KQFNDMDFIDMSNIDGFDVPMEFSSVSPSCN-RVIKCTANILGECPNELKV------PGGCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYXVVFCP 713
            + NNC ++VW   +          GG  L  G+   +    G  + R+W R  C FD+ G+G C TGDC G+L C G  GA P T+ E  L    + M F D+S +DGF+ P+  ++V          C A++   CP+ L+V        GC   C     D YCC     +   C PT FS  FK  CP  YSY  DDATS   C     Y + FCP
Sbjct:   33 MVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGW-SGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of FC932317 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.743e-26
Identity = 52/83 (62.65%), Postives = 59/83 (71.08%), Query Frame = 3
Query:  114 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEY 362
            KFDI N C  TVWAA +PGGG++LD+GQTWT+    GT +AR W RT C FDASGKG C+TGDC   L C   GA P TLAEY
Sbjct:   21 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103          
The following BLAST results are available for this feature:
BLAST of FC932317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP1_CASSA2.844e-3336.49Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP2_PRUPE6.335e-3339.45Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP_PRUAV8.274e-3339.01Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP1_PRUPE4.106e-3237.78Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TP1B_MALDO5.930e-3136.11Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP_ORYSJ5.930e-3138.50Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLPH_ARATH2.253e-3036.87Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
OLP1_SOLLC5.020e-3035.43Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ORYSJ2.109e-2835.16Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PRR3_JUNVI5.743e-2662.65Pathogenesis-related protein (Fragment) OS=Juniper... [more]

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Properties
Property NameValue
Genbank descriptionC34207C09EF PostHarveN Citrus clementina cDNA clone C34207C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932317 ID=FC932317; Name=FC932317; organism=Citrus clementina; type=EST; length=725bp
GAAACTTATCTATTTTCATATTCATTATCCTCTCCAAAATGAAGTTCGTT
AAAGCTCTTCCCATTTCTTCTGCTCTTCTTATTATCATTTCCATCACCCT
GACTCATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCT
GGGCCGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACA
TGGACCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCG
AACCAAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTG
ACTGTAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACC
TTGGCCGAGTACGCGTTGAAGCAATTTAATGACATGGATTTCATTGACAT
GTCCAACATTGACGGATTCGATGTTCCCATGGAATTTAGCTCTGTCTCTC
CCTCATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGC
CCGAATGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGTT
CAAGACCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTT
TCTCCAAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAG
GATGACGCTACCAGCACATTTACTTGCCCGACTGGGACAGACTACNAGGT
TGTATTCTGCCCCTGAAGCATTTTT
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