FC932326
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_CANDC (40S ribosomal protein S1 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=RPS1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.892e-34 Identity = 67/103 (65.05%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTT 463 DW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT+ Sbjct: 28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTS 130
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_CANAW (40S ribosomal protein S1 OS=Candida albicans (strain WO-1) GN=RPS1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.892e-34 Identity = 67/103 (65.05%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTT 463 DW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT+ Sbjct: 28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTS 130
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_CANAL (40S ribosomal protein S1 OS=Candida albicans GN=RPS1 PE=3 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 6.892e-34 Identity = 67/103 (65.05%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTT 463 DW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT+ Sbjct: 28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTS 130
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_ARTSF (40S ribosomal protein S3a OS=Artemia sanfranciscana PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.892e-34 Identity = 73/105 (69.52%), Postives = 84/105 (80.00%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE--HAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTT 463 DWYD+KAPS F R++GKTLV RT GTKIAS+ LK RVFEVSL DL E E ++RK RL AE+VQG+ +LTNF GM+FTTDKLRSLV+KW TLIE VDVKTT Sbjct: 29 DWYDVKAPSLFTNRDIGKTLVNRTAGTKIASDSLKGRVFEVSLADLQGESEAERSFRKFRLIAEEVQGRYLLTNFHGMDFTTDKLRSLVKKWQTLIECSVDVKTT 133
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_CANTT (40S ribosomal protein S1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=RPS1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.001e-34 Identity = 67/102 (65.69%), Postives = 84/102 (82.35%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKT 460 DW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT Sbjct: 28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKT 129
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_APLCA (40S ribosomal protein S3a OS=Aplysia californica GN=RPS3A PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 9.001e-34 Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTT 463 +WYD+KAPS F VR +GKTLVTR+QGTKIAS+ LK RVFEVSL DL N+E +RK +L AE+VQG+NVLTNF GM+ T DKL S+V+KW TLIEA VDVKTT Sbjct: 29 EWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDEV-TFRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTT 130
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_ANODA (40S ribosomal protein S3a OS=Anopheles darlingi PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.001e-34 Identity = 71/105 (67.62%), Postives = 85/105 (80.95%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTT 463 DWYD+KAP+ F+ R VGKTLV RTQGT+IAS+GLK RVFEVSL DL NE+ E ++RK +L AE V G++VL NF GM+ TTDKLRS+V+KW TLIE VDVKTT Sbjct: 29 DWYDVKAPNMFKNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNEQDAERSFRKFKLIAESVNGRDVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTT 133
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_PODAN (40S ribosomal protein S1 OS=Podospora anserina GN=RPS1 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.176e-33 Identity = 67/106 (63.21%), Postives = 86/106 (81.13%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTXYF 472 DWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V V+TT ++ Sbjct: 28 DWYGIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVQTTDHY 133
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.535e-33 Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTT 463 +WYDIKAPS F V+++GKTLV RTQGTKIASEGLK RV+EVSLGD LN E +RK+RL EDVQG+ LTNF GM T DKL S+V+KWHTLIEA V VKT+ Sbjct: 26 EWYDIKAPSMFNVQHIGKTLVNRTQGTKIASEGLKGRVYEVSLGD-LNNAESEFRKMRLICEDVQGRTCLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTS 127
BLAST of FC932326 vs. ExPASy Swiss-Prot
Match: RS3A_CANGA (40S ribosomal protein S1 OS=Candida glabrata GN=RPS1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.005e-33 Identity = 68/103 (66.02%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTT 463 +WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR +DVQGKN+LTNF GM+FT DKLRS+VRKW TLIEA V VKT+ Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDDVQGKNLLTNFHGMDFTADKLRSMVRKWQTLIEANVTVKTS 130 The following BLAST results are available for this feature:
BLAST of FC932326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932326 ID=FC932326; Name=FC932326; organism=Citrus clementina; type=EST; length=476bpback to top |