FC932329

Overview
NameFC932329
Unique NameFC932329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5569 contig Ccv1_Contig5569:114..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.397e-58
Identity = 105/167 (62.87%), Postives = 128/167 (76.65%), Query Frame = 1
Query:   61 QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 561
            Q +LPPGFRF+PTDEEL+V YL +K +     + +I ++DLYKFDPW+LP+KA FGE+EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK + + G  ++VG+KKALVFY GK PKG KTNWIMHEYRL ++  S+            S +LDDWVLCRIYKK +
Sbjct:   11 QLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADG--RRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSH-----------GSSKLDDWVLCRIYKKTS 164          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.684e-49
Identity = 92/172 (53.49%), Postives = 117/172 (68.02%), Query Frame = 1
Query:   76 PGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYR---LTDNKVSNKP----PGCDLGNKKNSLRL---DDWVLCRIYKKNN 561
            PGFRFHPTDEELV  YLK+K     LP  +I +VD+YK+DPW+LP  A  GE+EWYF+ PRDRKY N  RPNR    G+WKATGTD+P+ S  S + +G+KK+LVFY G+  KG+KT+W+MHE+R   L+D+  S+ P        L N  NS  L   D W +CRI+KK N
Sbjct:   22 PGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKKTN 193          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.004e-48
Identity = 88/164 (53.66%), Postives = 116/164 (70.73%), Query Frame = 1
Query:   70 LPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 561
            L PGFRFHPTDEELV  YLK+K    PL + +I ++D+YK+DPW+LP  A  GE+EWYF+ PRDRKY N +RPNR   +G+WKATGTD+P+ SS  N+ +G+KK+LVFY G+  KG+KT+W+MHE+RL  +     PP     +   S   D W +CRI+KK N
Sbjct:   16 LLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL-PSLSEPSPPSKRFFDSPVSPN-DSWAICRIFKKTN 177          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.952e-46
Identity = 86/162 (53.09%), Postives = 106/162 (65.43%), Query Frame = 1
Query:   70 LPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 555
            LPPGFRFHPTDEEL+  YL  K     L    I+EVDL + +PWELP  A  GE+EWYF+S RDRKYP G R NRA T+GYWKATG DK V S G  Q VG+KK LVFY G+ P+G+KT W+MHEYRL ++            +       ++WV+CR++ K
Sbjct:   22 LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLEND------------HSHRHTCKEEWVICRVFNK 171          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.314e-45
Identity = 89/171 (52.05%), Postives = 111/171 (64.91%), Query Frame = 1
Query:   52 GSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNL 564
            G     LPPGFRFHPTDEEL+ HYL +K          IAEVDL K +PW+LP +A  GE+EWYFFS RDRKYP G R NRA  +GYWKATG D+ + SS +   VG+KK LVFY G+ PKG K+NW+MHEYRL + K S         +  +    D+WV+ R+++K  L
Sbjct:   11 GGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL-EGKFSY--------HFISRSSKDEWVISRVFQKTTL 172          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.148e-44
Identity = 86/165 (52.12%), Postives = 112/165 (67.88%), Query Frame = 1
Query:   70 LPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNL 564
            +PPGFRFHPTDEEL+ +YL KK   +    + I++VDL K +PWELP KA  GE+EWYFF+ RDRKYP G R NRA  +GYWKATG D+ + SS +   +G+KK LVFY G+ PKG K+ W+MHEYRL D K S         +  +S   D+WVLC++  K+ +
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL-DGKFSY--------HYISSSAKDEWVLCKVCLKSGV 175          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.558e-44
Identity = 86/192 (44.79%), Postives = 123/192 (64.06%), Query Frame = 1
Query:   25 MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFG---EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCD-----LGNKKNSLRLDDWVLCRIYKKNNLHRPL 576
            M S   S   + Q  +PPGFRFHPT+EEL+ +YL+KK +S  + + +I +VDL K +PW++      G   + +WYFFS +D+KYP G R NRA  +G+WKATG DK + S+G  +++G++K LVFY G+ P G K++WIMHEYRL DN +S +          +G        + WV+CRI+KK NLH+ L
Sbjct:    1 MMSKSMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNG--RRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQD---EGWVVCRIFKKKNLHKTL 187          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 6.966e-42
Identity = 85/176 (48.30%), Postives = 108/176 (61.36%), Query Frame = 1
Query:   70 LPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVM--------------SSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 555
            LPPGFRFHPTD E+++ YL +K  +       I EVDL K +PW+LP+KA  GE+EWYFFS +D KYP G R NRA   GYWKATG D+ +               S+   Q VG+KK LVFY G+ PKG KTNW+MHE+RL  N + N  P   L  K      D+WV+C+++ K
Sbjct:   19 LPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHAN-LHNHHPNLRLNPK------DEWVVCKVFHK 187          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.188e-41
Identity = 77/173 (44.51%), Postives = 117/173 (67.63%), Query Frame = 1
Query:   61 QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFG---EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDD--WVLCRIYKKNNL 564
            Q  +PPGFRFHPT+EEL+ +YL+KK S+  + + +I ++DL K +PW++      G   + +WYF+S +D+KYP G R NRA T G+WKATG DK + ++G   ++G++K LVFY G+ P G K++WIMHEYRL ++ + +     D+  +   +   D  WV+CR++KKNNL
Sbjct:    8 QSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNG--DRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNL 178          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41
Identity = 78/173 (45.09%), Postives = 114/173 (65.90%), Query Frame = 1
Query:   61 QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFG---EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHR 570
            Q  +PPGFRFHPT+EEL+ +YL+KK +S  + + +I EVDL K +PW++  +   G   + +WYFFS +D+KYP G R NRA  +G+WKATG DK + S    +++G++K LVFY G+ P G K++WIMHEYRL D  +SN      +     S   + WV+CR+++K N  +
Sbjct:   13 QSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICS--CVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADV-VTEDPMSYNEEGWVVCRVFRKKNYQK 182          
The following BLAST results are available for this feature:
BLAST of FC932329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
NAC72_ARATH1.397e-5862.87NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC94_ARATH7.684e-4953.49Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC9_ARATH1.004e-4853.66Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC31_ARATH7.952e-4653.09Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC98_ARATH2.314e-4552.05Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC54_ARATH1.148e-4452.12Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC43_ARATH2.558e-4444.79NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC77_ORYSJ6.966e-4248.30NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC66_ARATH1.188e-4144.51NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC12_ARATH2.027e-4145.09NAC domain-containing protein 12 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC34207D10EF PostHarveN Citrus clementina cDNA clone C34207D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932329 ID=FC932329; Name=FC932329; organism=Citrus clementina; type=EST; length=694bp
GGCAGCTAGCTAGCATTAATATATATGGAGAGTGCAGACTCATCGACGGG
CGGCTCACCTCAGCCGAACCTGCCCCCGGGGTTCCGGTTCCATCCCACAG
ATGAAGAGCTGGTGGTTCACTACCTCAAGAAGAAAGCAAGCTCAGCTCCT
CTCCCAGTTTCAATTATTGCGGAAGTTGATTTGTACAAGTTTGATCCATG
GGAGCTTCCAGCTAAGGCAACATTTGGAGAGCAAGAATGGTACTTCTTTA
GCCCTAGGGACAGGAAGTATCCGAACGGGGCGAGGCCAAACAGAGCAGCA
ACTTCAGGATATTGGAAGGCTACCGGAACAGATAAGCCAGTGATGAGTTC
AGGGAGTAATCAAAAAGTTGGTGTGAAAAAAGCACTTGTATTCTATGGAG
GCAAGCCTCCTAAAGGTATCAAGACCAATTGGATCATGCATGAATATCGC
CTTACCGATAACAAAGTCAGTAACAAGCCCCCTGGTTGTGATTTGGGCAA
CAAAAAGAACTCCCTGAGGCTTGATGACTGGGTGCTATGTCGAATATACA
AAAAAAACAACTTGCATAGGCCATTAATGGATCATGATAAAGATGATTCG
ATGGATGATATGCTTGGAGTACACATACCGCCTTCGCTGATGATTAGTAG
CCAGCAACAGAATACAAATTTGAAGCTGCATATGCCGACTAGGG
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