FC932329

Overview
NameFC932329
Unique NameFC932329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.647e-41
Identity = 77/160 (48.12%), Postives = 108/160 (67.50%), Query Frame = 1
Query:   76 PGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 555
            PGFRFHPTDEEL+ +YL++K  +  + + +I ++D+YK+DPW+LP  ++ GE+EWYFF  R RKY N  RPNR   SG+WKATG DKPV S  +   VG+KK+LV+Y G   KG KT+W+MHE+RL     ++ P          + + + W LCRI+K+
Sbjct:   20 PGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYS--NLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKTDSP----------AQQAEVWTLCRIFKR 167          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.457e-41
Identity = 78/173 (45.09%), Postives = 112/173 (64.74%), Query Frame = 1
Query:   67 NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFG---EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPL 576
            ++PPGFRFHPTDEEL+ +YL+KK +   + + +I E+DL K +PW+L  +   G   + EWYFFS +D+KYP G R NRA T+G+WKATG DK +  + +  ++G++K LVFY G+ P G KT+WIMHEYRL  + V               ++ D WV+CR++ K +  R L
Sbjct:    9 SVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANA-CRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLDQDNV--------------DVQEDGWVVCRVFMKKSYQRGL 166          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41
Identity = 81/178 (45.51%), Postives = 115/178 (64.61%), Query Frame = 1
Query:   28 ESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKA-SSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKN 558
            E    S+    +  LPPGFRFHP D+ELV  YL +++  +   P  ++ +VDL K +PW++P  A  G ++WYF+S RDRKY  G R NRA  +GYWKATG D+ ++  G  + VG++K LVFY G+ P+G KT+W+MHE+RL   + S+ PP   L + K     +DWVLCR++ KN
Sbjct:    5 EEMKESSISMVEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKG--KLVGMRKTLVFYQGRAPRGRKTDWVMHEFRL---QGSHHPPNHSLSSPK-----EDWVLCRVFHKN 172          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 80/166 (48.19%), Postives = 103/166 (62.05%), Query Frame = 1
Query:   70 LPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQE--WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 561
            LPPGF FHP D EL+ HYLKKK     +   II EVD+YK +PW+LPAK     Q+  W+FF+ RDRKYPNG+R NRA  +GYWK+TG D+ +      Q +G KK LVF+ G+PP G +T WIMHEY + + +    P              D +VLCRI K+N+
Sbjct:    9 LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKM--GKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACPD-----------MKDAYVLCRITKRND 161          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 79/167 (47.31%), Postives = 107/167 (64.07%), Query Frame = 1
Query:   67 NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQE---WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL-TDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 555
            ++PPGFRFHPTDEELV +YL+KK +S  + +  I ++DLYK +PW+L      G +E   WYFFS +D+KYP G R NRA  +G+WKATG DK +    S   +G++K LVFY G+ P G K++WIMHEYRL TD   + +  G              WV+CR++KK
Sbjct:    6 HVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHS--LIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEG--------------WVVCRVFKK 156          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39
Identity = 76/166 (45.78%), Postives = 109/166 (65.66%), Query Frame = 1
Query:   67 NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQ--EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKN 558
            +L PGFRFHPTDEELV +YLK+K  + P     I+  D+YK +PW+LP K+    +  EWYFFS  D+KY NG++ NRA   GYWK TG D+ + +   ++ VG+KK LV++ G+ P+G +TNW+MHEYRL+D  +           KK  +  + +VLCRI++K+
Sbjct:    8 SLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDEDL-----------KKAGVPQEAYVLCRIFQKS 160          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 58/133 (43.61%), Postives = 79/133 (59.40%), Query Frame = 1
Query:   73 PPGFRFHPTDEELVVHYLKKKA--SSAPLPVSIIAEVDLYKFDPWELPAKATFGEQE--WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVM-SSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLT 456
            P GFRF P DEE+V HYL+ K   S       +I+ VD+  F+PW+LP+K+    ++  WYFFS ++ KY  G +  R   SG+WK TG    VM   G+ +K+G K+ LVF   K   G KT+W+MHEY  T
Sbjct:    4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVF---KNRDGSKTDWVMHEYHAT 133          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 1
Query:   79 GFRFHPTDEELVVHYLKKKAS--SAPLPVSIIAEVDLYKFDPWELP----AKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVS 471
            GFRF+PT+EELV  YL+ +    S      +I  +D+++ +P  LP     +     ++W+FF PR  +   G RP+R   SGYWKATG+  PV S   N+ +G KK +VFY GK P G KT W M+EY   D  V+
Sbjct:    8 GFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSK-DNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDETVN 143          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 1
Query:   79 GFRFHPTDEELVVHYLKKKASSAPLPVS-IIAEVDLYKFDPWELPA--KATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQ-KVGVKKALVFYGGKPPKGIKTNWIMHEYRLT 456
            G+RF+PT EEL+ HYLK K       V   I+E+++  +DP  LP+  K    +  WYFF P++          R  +SGYWKATG D+ +     N+ ++G+KK LV+Y G+ PKG+ T W+MHEY +T
Sbjct:    7 GYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHIT 136          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.906e-23
Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = 1
Query:   70 LPPGFRFHPTDEELVVHYLKKKASSAPLPV-SIIAEVDLYKFDPWELPAKATFGE------QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTD 459
            L  GFRF+PT+ EL+ +YL+ +       + S+I  +D++  +P +LP  A  GE      ++W FF PR  +   G RP+R   SGYWKATG+  PV S   N+ +GVKK +VFY GK P G KT W M+EY+  +
Sbjct:    5 LSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLA--GERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSP-DNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVE 138          
The following BLAST results are available for this feature:
BLAST of FC932329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
NAC42_ARATH2.647e-4148.13NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC76_ORYSJ3.457e-4145.09NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC22_ARATH5.897e-4145.51NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC74_ORYSJ3.822e-4048.19NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC7_ARATH1.112e-3947.31NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC78_ARATH9.415e-3945.78NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC4_ARATH2.940e-2443.61NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC90_ARATH6.550e-2441.61NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC69_ARATH8.555e-2441.54NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC61_ARATH1.906e-2342.34Putative NAC domain-containing protein 61 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionC34207D10EF PostHarveN Citrus clementina cDNA clone C34207D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932329 ID=FC932329; Name=FC932329; organism=Citrus clementina; type=EST; length=694bp
GGCAGCTAGCTAGCATTAATATATATGGAGAGTGCAGACTCATCGACGGG
CGGCTCACCTCAGCCGAACCTGCCCCCGGGGTTCCGGTTCCATCCCACAG
ATGAAGAGCTGGTGGTTCACTACCTCAAGAAGAAAGCAAGCTCAGCTCCT
CTCCCAGTTTCAATTATTGCGGAAGTTGATTTGTACAAGTTTGATCCATG
GGAGCTTCCAGCTAAGGCAACATTTGGAGAGCAAGAATGGTACTTCTTTA
GCCCTAGGGACAGGAAGTATCCGAACGGGGCGAGGCCAAACAGAGCAGCA
ACTTCAGGATATTGGAAGGCTACCGGAACAGATAAGCCAGTGATGAGTTC
AGGGAGTAATCAAAAAGTTGGTGTGAAAAAAGCACTTGTATTCTATGGAG
GCAAGCCTCCTAAAGGTATCAAGACCAATTGGATCATGCATGAATATCGC
CTTACCGATAACAAAGTCAGTAACAAGCCCCCTGGTTGTGATTTGGGCAA
CAAAAAGAACTCCCTGAGGCTTGATGACTGGGTGCTATGTCGAATATACA
AAAAAAACAACTTGCATAGGCCATTAATGGATCATGATAAAGATGATTCG
ATGGATGATATGCTTGGAGTACACATACCGCCTTCGCTGATGATTAGTAG
CCAGCAACAGAATACAAATTTGAAGCTGCATATGCCGACTAGGG
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