FC932329

Overview
NameFC932329
Unique NameFC932329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5569 contig Ccv1_Contig5569:114..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 56/133 (42.11%), Postives = 76/133 (57.14%), Query Frame = 1
Query:   73 PPGFRFHPTDEELVVHYLKKK--ASSAPLPVSIIAEVDLYKFDPWELPAKATFG--EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVM-SSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLT 456
            P GFRF PTD E+V  YL+ K   S+      +I+ VD+  FDPW+LP+ +     +Q WYFF  ++ KY  G R  R   SG+WK TG    +M  +G  +K+G K+ LVF   K   G K++W MHEY  T
Sbjct:    4 PVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVF---KNHGGSKSDWAMHEYHAT 133          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21
Identity = 53/131 (40.46%), Postives = 76/131 (58.02%), Query Frame = 1
Query:   79 GFRFHPTDEELVVHYLKKKASSAPLPVS-IIAEVDLYKFDPW-ELPAKATFGEQ--EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSS-GSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLT 456
            G+RF PT EE++ HYLK K       V   I+E+++    P  +LP  A    +  EWYFFSP +   PN  +  R   SG+WK TG D+ +    G+   +G+KK LV++ GK P G++T W+MHEY +T
Sbjct:    7 GYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHIT 137          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20
Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 1
Query:   73 PPGFRFHPTDEELVVHYLKKKASSAPLPV--SIIAEVDLYKFDPWELPAKATFGEQE--WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEY 447
            P G RF PTDEE+VV YL  K S          I  V + + DPWELP ++    ++  W FF P++ KY  G +  R   SG+WK+TG  KP+M   + Q++G KK L+FY  K     K++W++HEY
Sbjct:    4 PVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMR--NRQQIGEKKILMFYTSKES---KSDWVIHEY 127          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC1_ARATH (NAC domain-containing protein 1 OS=Arabidopsis thaliana GN=NAC001 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18
Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 1
Query:   79 GFRFHPTDEELVVHYLKKKA---SSAPLPVSIIAEVDLYKFDPWELPAKATFGEQE--WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV------MSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEY 447
            GF F P DEELV HYL+ K    +S  + V+I +EV++  +DPW L  ++ +  ++  WYFFS R+     G R +R   SG WK TG    V       S G   K+G K+ LVF  G+ P   K++W++HE+
Sbjct:    6 GFGFRPNDEELVGHYLRNKIEGNTSRDVEVAI-SEVNICSYDPWNLRFQSKYKSRDAMWYFFSRRENN--KGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFLDGRYPDKTKSDWVIHEF 136          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC8_ARATH (NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 51/152 (33.55%), Postives = 67/152 (44.08%), Query Frame = 1
Query:   37 DSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKA----SSAPLPVSIIAEVD----LYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSG-----YWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 453
            D+S      P LP G +F P+D E++ H L K      SS P     I  V+    +    P  LP   + G    +FF    + Y  G R  R           W  TG  KPV+  G  +  G KK +V YGGK    +KTNW+MH+Y L
Sbjct:   47 DNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNLPGVKSDGTVS-HFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQR--GCKKIMVLYGGK---AVKTNWVMHQYHL 192          
The following BLAST results are available for this feature:
BLAST of FC932329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
NAC5_ARATH1.046e-2142.11NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC68_ARATH1.784e-2140.46NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC3_ARATH7.495e-2041.09NAC domain-containing protein 3 OS=Arabidopsis tha... [more]
NAC1_ARATH9.162e-1838.81NAC domain-containing protein 1 OS=Arabidopsis tha... [more]
NAC8_ARATH4.869e-1133.55NAC domain-containing protein 8 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC34207D10EF PostHarveN Citrus clementina cDNA clone C34207D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932329 ID=FC932329; Name=FC932329; organism=Citrus clementina; type=EST; length=694bp
GGCAGCTAGCTAGCATTAATATATATGGAGAGTGCAGACTCATCGACGGG
CGGCTCACCTCAGCCGAACCTGCCCCCGGGGTTCCGGTTCCATCCCACAG
ATGAAGAGCTGGTGGTTCACTACCTCAAGAAGAAAGCAAGCTCAGCTCCT
CTCCCAGTTTCAATTATTGCGGAAGTTGATTTGTACAAGTTTGATCCATG
GGAGCTTCCAGCTAAGGCAACATTTGGAGAGCAAGAATGGTACTTCTTTA
GCCCTAGGGACAGGAAGTATCCGAACGGGGCGAGGCCAAACAGAGCAGCA
ACTTCAGGATATTGGAAGGCTACCGGAACAGATAAGCCAGTGATGAGTTC
AGGGAGTAATCAAAAAGTTGGTGTGAAAAAAGCACTTGTATTCTATGGAG
GCAAGCCTCCTAAAGGTATCAAGACCAATTGGATCATGCATGAATATCGC
CTTACCGATAACAAAGTCAGTAACAAGCCCCCTGGTTGTGATTTGGGCAA
CAAAAAGAACTCCCTGAGGCTTGATGACTGGGTGCTATGTCGAATATACA
AAAAAAACAACTTGCATAGGCCATTAATGGATCATGATAAAGATGATTCG
ATGGATGATATGCTTGGAGTACACATACCGCCTTCGCTGATGATTAGTAG
CCAGCAACAGAATACAAATTTGAAGCTGCATATGCCGACTAGGG
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