FC932337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932337 vs. ExPASy Swiss-Prot
Match: PTGR1_HUMAN (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28 Identity = 83/222 (37.39%), Postives = 113/222 (50.90%), Query Frame = 2 Query: 47 VSNKQVILSDYVTGFPKESDMKIITGSINLKVPEGSKDTLLLKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQL--LIKILDTNVPLSYYTGILGMPGLTAYGGLYELSSPKKGGYVYVSAASGAVGQLVGQFAKLVGCHVVGSAGSKEKVDLLKNKFGFDDAFKL*ERTDLDAALKRCFPE 706 V K L + G+P SD ++ T + P +LL+ L+L+ DPYMR +L K G+ + G V+KV++S + K +V W S+ L L+ +PLS G +GMPGLTAY GL E+ K G V V+AA+GAVG +VGQ AKL GC VVG+ GS EKV L+ K GFD F L+ LK+ P+ Sbjct: 2 VRTKTWTLKKHFVGYPTNSDFELKTAEL----PPLKNGEVLLEALFLTVDPYMRVAAKRL---------KEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPD 209
BLAST of FC932337 vs. ExPASy Swiss-Prot
Match: PTGR1_CAVPO (Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28 Identity = 86/223 (38.57%), Postives = 119/223 (53.36%), Query Frame = 2 Query: 47 VSNKQVILSDYVTGFPKESDMKIITGSINLKVPEGSKDTLLLKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQLLIKILDT---NVPLSYYTGILGMPGLTAYGGLYELSSPKKGGYVYVSAASGAVGQLVGQFAKLVGCHVVGSAGSKEKVDLLKNKFGFDDAFKL*ERTDLDAALKRCFPE 706 V K L + G P +SD ++ T +++P +LL+ L+LS DPYMR +L K G + G V++V++S + + +V + W I + L K+L +PLS G +GMPGLTAY GL E+ K G V VSAA+GAVG +VGQ AKL GC VVG+AGS EK+ LK + GFD AF L+ ALK+ P+ Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFELKT----VELPPLKNGEVLLEALFLSVDPYMRIASKRL---------KEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTT-HFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPD 209
BLAST of FC932337 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.811e-19 Identity = 63/181 (34.81%), Postives = 92/181 (50.83%), Query Frame = 2 Query: 170 LKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQLLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELSSPKKGG--YVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNKFGFDDAFKL*ERTDLDAALKRC 697 ++ LYLS DPYMR RM++ ++ ++ + + G GV + +S H N+ K D V + +I +L K+ V LSY+ G +GMPGLT+ G+ E G + VS A+GA G L GQ +L+GC VVG G+ EK L ++ GFD A E + K C Sbjct: 41 VRTLYLSVDPYMRCRMNEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAINYKEGNVAEQLHKLC 221
BLAST of FC932337 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 59/165 (35.76%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 170 LKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQLLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELSSPKKGG--YVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNKFGFDDA 649 ++ LYLS DPYMR RM++ ++ ++ + + G G+ + +S H N K D V + +I L K+ V LSY+ G +GMPGLT+ G+ E G + VS A+GA G + GQ L+GC VVG G+ EK LL ++ GFD A Sbjct: 41 VRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAA 205
BLAST of FC932337 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17 Identity = 58/165 (35.15%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 170 LKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEECSLIQSPQLLIKILDTNVP--LSYYTGILGMPGLTAYGGLYELSSPKKGG--YVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNKFGFDDA 649 ++ LYLS DPYMR RM++ ++ ++ + + G G+ + +S H N K D V + +I L K+ V LSY+ G +GMPGLT+ G+ E G + VS A+GA G + GQ +GC VVG G+ EK LL ++ GFD A Sbjct: 41 VRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAA 205
BLAST of FC932337 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16 Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 2 Query: 170 LKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEECSLIQ-------SPQLLIKILDTNVPLSYYTGILGMPGLTAYGGLYELSSPKKGG--YVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNKFGFDDA 649 ++ LYLS DPYMR +M++ ++A ++ + G G+ V +S H K D V W+ +++ PQL+ + LSY+ G +GMPGLT+ G+ E G + VS A+GA G L GQ L+GC VVG G++EK L ++ GFD A Sbjct: 41 VRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLV------DGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA 205
BLAST of FC932337 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 2 Query: 86 GFPKESDMKIITGSINLKVPEGSKDTLLLKNLYLSCDPYMRGRMSKLDKPSFVASFKPGEPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEECSLIQ-------SPQLLIKILDTNVPLSYYTGILGMPGLTAYGGLYELSSPKKGG--YVYVSAASGAVGQLVGQFAKLVGC-HVVGSAGSKEKVDLLKNKFGFDDA 649 G P + ++ S+ + EG + ++ LYLS DPYMR +M++ ++A ++ + G G+ + +S H K D V W+ +++ PQL+ + LSY+ G +GMPGLT+ G+ E G + VS A+GA G L GQ L+GC VVG G+ EK L ++ GFD A Sbjct: 16 GNPVAENFRVEEVSLPDTINEGQ---VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLV------DGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELGFDAA 205 The following BLAST results are available for this feature:
BLAST of FC932337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932337 ID=FC932337; Name=FC932337; organism=Citrus clementina; type=EST; length=722bpback to top |