FC932346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_SULIK (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eif6 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 74/212 (34.91%), Postives = 113/212 (53.30%), Query Frame = 2 Query: 68 RLMFENSCEVGVFSKLTNAFCLVAIG-GSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 RL + +GV+ N + +V G SE+ + + T++I + I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +G ND G+ T P Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRGLDSETKENIVQILGTELI---EAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGP 212
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_SULIA (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.27) GN=eif6 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 74/212 (34.91%), Postives = 113/212 (53.30%), Query Frame = 2 Query: 68 RLMFENSCEVGVFSKLTNAFCLVAIG-GSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 RL + +GV+ N + +V G SE+ + + T++I + I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +G ND G+ T P Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRGLDSETKENIVQILGTELI---EAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGP 212
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_HALWD (Translation initiation factor 6 OS=Haloquadratum walsbyi (strain DSM 16790) GN=eif6 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22 Identity = 70/210 (33.33%), Postives = 99/210 (47.14%), Query Frame = 2 Query: 68 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 R F S VGVF++ T+ L+ + AEL IP V T+IGG+ +G L GN+NG+L+ T +E + + + V V + R++A GN I ND+ A H DL E E I L V V R +A VG+ +NRG L HP +L+ + V GTVN G+ ++G+G G DT P Sbjct: 3 RASFAGSPYVGVFARATDDVLLLRSDVDDDTADAMAAELD--IPAVATTIGGSGTVGALATGNENGILVTSNVTMREKEAIETTA--SVSVTELPGRINAAGNVILANDYGAYVHPDLSTEAVESIESALNVPVARGKLADVRTVGTAAVATNRGVLCHPKAREPELEAIEDHLDVRADIGTVNYGAPLVGSGIVAGQTGYVVGEDTTGP 208
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_SULSO (Translation initiation factor 6 OS=Sulfolobus solfataricus GN=eif6 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 72/212 (33.96%), Postives = 113/212 (53.30%), Query Frame = 2 Query: 68 RLMFENSCEVGVFSKLTNAFCLVAIG-GSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVE-VFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 RL + +GV+ N + ++ G SE+ + + T+++ + I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE + R +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +G ND G+ T P Sbjct: 5 RLSVFGTDNIGVYIYTNNKYTIIPRGLDSETKENIAQVLGTELL---EAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEILNSKVTALGNTILANNKAALIYPEFNDIEEKIIKETLGVEDIKRGKIAQMITVGSVGVITNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIKSGLVANDKGTLVGASTTGP 212
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_METPE (Translation initiation factor 6 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=eif6 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.389e-21 Identity = 64/210 (30.48%), Postives = 104/210 (49.52%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 M L +E +G+F+++ +V S + + + L + +VKT + G+ IIG L GN G ++ E++ ++ + V +E ++A GN I ND +A H D+D T E I VLGV V R T++G VG +NRG LVH ++ +L L + + +P+ GT+N GS ++G G N G +T Sbjct: 1 MIRTLAYEGDPHIGIFTRVLEDIAVVPPEASADYCAALKEALG--VTLVKTHVQGSSIIGSLVSGNSRGAIVSGLAYPDEIR----AIEEYREVMLLEGSMNAAGNVILANDQMAAVHPDMDNATIEQIHSVLGVPVIRLTLSGIKTVGMAGYATNRGILVHARSAGRELATLESTTDLPVGTGTINMGSGLVGTGLLANSTGYLAGIET 204
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_METAC (Translation initiation factor 6 OS=Methanosarcina acetivorans GN=eif6 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 67/201 (33.33%), Postives = 104/201 (51.74%), Query Frame = 2 Query: 95 VGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 +GVF+ T LV + E E+ DV V++T + G+ ++G L GN NG +LP+ E+Q + + V + +RL+A+GN + ND AL H DL + E IA L V+V+R T+AG VG +N+G LVHP + + + L + P+ GT N G++++G+G N GS+T P Sbjct: 13 IGVFATCTEDVVLVPPLTKPEVCALLE-EVLDV-RVIETLVNGSIVVGALSRGNSNGFMLPYGAR-AEMQRFTD-----IPVGILPDRLNAVGNIVFANDSAALVHPDLSDKALEAIARTLKVDVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEREVLEKIFGFPVNIGTTNFGTQMLGSGLLANSKNFVAGSETTGP 205
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_NITMS (Translation initiation factor 6 OS=Nitrosopumilus maritimus (strain SCM1) GN=eif6 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 65/203 (32.02%), Postives = 99/203 (48.77%), Query Frame = 2 Query: 95 VGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPV--VKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 +GV+ + + L+ +G F T +L + V + TSI R+IG LC+ N G+LLP T E L+ L +V V ++ +L+ALGN I ND A+ L +E + I+DVLGVE ++ +AG G +N G +HP ED+ S L V + ++N G + +G N+ GS T P Sbjct: 14 IGVYISVNDNTILLPMG----FAKTKAEKLAKYLGVNYLFTSIANTRLIGALCIMNNKGILLPKTAYQNEFDFLKKELDLEVGV--LDSKLTALGNVICANDKGAVVSPWLSKEDCQTISDVLGVETIQKKIAGFNQTGVVMVANNSGAAIHPEADEEDMKTFSNLLGVKIEQSSINNGIPYVSSGILANNNCIIVGSLTTGP 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_METJA (Translation initiation factor 6 OS=Methanocaldococcus jannaschii GN=eif6 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 73/219 (33.33%), Postives = 114/219 (52.05%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPV--VKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVA-GTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 M R F +GV + T L+ I + + E+++V+ ++T+IGG+ ++G L V NK GLLLP D+EL ++N L + + V+ I+ + +ALGN I ND AL +L ++ ++ I D L VEV T+A VGS +N+G L HP ++L+ L +L +V + GT N+G+ +GA N A G DT P Sbjct: 3 MIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVN----EVSEVLETKCLQTNIGGSSLVGSLSVANKYGLLLPKIVEDEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKGALISPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLFKVEYIGKGTANKGTTSVGACIIANSKGAVVGGDTTGP 216
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_THEAC (Translation initiation factor 6 OS=Thermoplasma acidophilum GN=eif6 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20 Identity = 59/198 (29.80%), Postives = 102/198 (51.52%), Query Frame = 2 Query: 95 VGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 +G+++K + + + E + F+ L + V + SI + +IG + V N NGL++P+ + L L D V +++++++A+GN I NDH A+ H + + + I D LGVE R T+ + VGS +++G LV+P T ++L+ L +V + +GT N GS +GA N G DT Sbjct: 13 IGIYAKAWDDVAFITMMADEKTVADFQEVLQ--VDVRRISIDNSSLIGTMMVMNSNGLIVPYGSEITGLGDL-----DGRNVLQLKDKINAIGNDIIANDHGAIIHKNFSNRSRKEIEDTLGVETIRTTIGNILTVGSAGILTSKGMLVNPETDDDELEFLRDFFKVSVKSGTANFGSIYVGASIVANSKGVLVGKDT 203
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_METHJ (Translation initiation factor 6 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=eif6 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 59/198 (29.80%), Postives = 101/198 (51.01%), Query Frame = 2 Query: 95 VGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 +GVF+++ + +V E + +E L + +V+T+I + IIG L VGN NGL++ T++E+ +L + + +EE ++A GN I NDH A H ++D E + ++D L V V T+ VG +N G +V P T+ ++ L + +P+ GTV G+ ++G G N + G T Sbjct: 13 IGVFTRVFDDIAVVPPDVPEEVTTRYEEALK--VEIVRTTIQRSPIIGSLLVGNNNGLVITGMATEEEIA----TLSEYRDLMLLEEGMNAAGNIILANDHFAAVHPEMDEEFMDALSDFLKVPVIPLTLGDVKTVGMAAVATNSGVVVSPRTTPGEIQRLEQVCSLPVGKGTVTMGNAMVGTGLVANRYGYLAGVGT 204 The following BLAST results are available for this feature:
BLAST of FC932346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932346 ID=FC932346; Name=FC932346; organism=Citrus clementina; type=EST; length=705bpback to top |