FC932346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_PYRAE (Translation initiation factor 6 OS=Pyrobaculum aerophilum GN=eif6 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 60/166 (36.14%), Postives = 92/166 (55.42%), Query Frame = 2 Query: 200 VVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 V + ++ + ++G V N NG+LLP ++E++ L +L V + I + +A+ N I + VAL L+ +++ADVLGVEV T+AGN LVG+ ++RG LV P + +DL +LS +V + GTVNRG + G VND A G +T P Sbjct: 48 VARFTVARSPLLGIFTVVNDNGVLLPPLVLEEEVR-LFKALGLNVDI--INTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVNDNGALVGDETAGP 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_PYRAR (Translation initiation factor 6 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eif6 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19 Identity = 59/166 (35.54%), Postives = 90/166 (54.22%), Query Frame = 2 Query: 200 VVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 V + ++ + ++G V N NG+LLP ++E++ L +L V V + + +A+ N I + VAL L+ +++ADVLGVEV T+AGN LVGS ++RG LV P + EDL +L+ + GTVN+G + G VND A G +T P Sbjct: 48 VARLTVAKSPLLGIFTVVNDNGVLLPPMVLEEEIR-LFKALGLNVEV--LNTKYTAISNLILAGNKVALVSPLLEPSVRKVVADVLGVEVIVDTIAGNPLVGSLAVLNSRGVLVAPEATDEDLKKLAEYFKAKTDLGTVNKGKSFLRGGIVVNDHGALVGDETAGP 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_CENSY (Translation initiation factor 6 OS=Cenarchaeum symbiosum GN=eif6 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19 Identity = 53/163 (32.52%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 209 TSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 TS+ R++G L V N +G+++P T ++ E + + VVV ++ + +ALGN I+ ND + RE IIAD LG+EV ++ +AG VG+ ++ GG++HP T ED+ +S + V + T+N G + +G N + GS T P Sbjct: 50 TSVANTRLMGTLMVLNNSGIIMPSTISEIEYEFYKKHTDLNVVV--LDTKFTALGNMISVNDRGGVVSPVFPREEVRIIADALGIEVIQRRIAGYNQVGAMMVATSGGGIIHPETDGEDVKRISEVMGVHMEPATINGGIPFVSSGLLANKKSVVAGSFTSGP 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_TRYCR (Eukaryotic translation initiation factor 6 (Fragment) OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 470 FRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 FR ++A N LVGSY +N+G +VHP T +D+DE+++L QVP+VAGT+NRG+ IG+G VNDW AFCG +T Sbjct: 4 FRTSIAENALVGSYAVVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGLVVNDWAAFCGLNT 76
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_THEPD (Translation initiation factor 6 OS=Thermofilum pendens (strain Hrk 5) GN=eif6 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 58/198 (29.29%), Postives = 93/198 (46.97%), Query Frame = 2 Query: 95 VGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 +GV+ + F L+ E L+ + + S+ G R++G GN NGL++P D EL+HL++ L +VV + R + +GN + ND+ +A L + + IAD LGVE + ++ VGS +NRG + P + E++ + +V TVNRG + G N A G DT Sbjct: 15 IGVYIFANDRFALIPYDAPEKLDRKIAENLS--VDAFRVSVAGTRLVGIFLAGNNNGLVVPRVILDSELEHLKSLLDVNIVVLE-DVRETGIGNLVLANDNGCVASQILPKSAVDRIADALGVECIQMSIGDVPFVGSLSVATNRGVALPPLATEEEIKSVEEALKVKANVLTVNRGKMFLRTGLVANSKGALVGEDT 209
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_HALS3 (Translation initiation factor 6 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eif6 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 60/210 (28.57%), Postives = 98/210 (46.67%), Query Frame = 2 Query: 68 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 R F S +GVF++ T + LV + F + EL +P V+T++GG+ +G L GN +GLL+ + ++E + + V V + ++A GN + ND A H+ L + + + L V R +AG VG+ + G L HP + +L+ + V GTVN G+ ++G+G D G DT P Sbjct: 3 RAAFRGSAYIGVFARATESCVLVRPDLDDDFVDSIADELG--VPAVQTTVGGSSTVGSLAAGNSSGLLVSNRIRERERDRIEAA---GVTVGELPGAVNAAGNVVVANDDGAYVHSGLSDDAVAAVEETLDVSATRGQLAGVDTVGTAAVATTDGVLCHPKATDAELERIEETLGVYADVGTVNYGAPLVGSGLVAADDGYLVGDDTTGP 207
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_THEVO (Translation initiation factor 6 OS=Thermoplasma volcanium GN=eif6 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 61/212 (28.77%), Postives = 104/212 (49.06%), Query Frame = 2 Query: 53 VIMATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 VI T +M S +G+++K + + E + F L + + + SI G+ +IG + N NG++LP+ + L + D V ++++++A+GN I NDH A+ H + + I D LGVE R ++ + VGS +++G LV+P T ++L+ L +V + +GT N GS +GA N G DT Sbjct: 3 VIRKTSVM--RSSFIGIYAKAWDDVAFITKMADEKTVNEFREVLQ--VDIKRISIDGSTLIGTMIAVNSNGIVLPYGSNIDGLDGI-----DGRNVLYLKDKINAVGNDIIANDHGAIIHKAFSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFLKDFFKVSVKSGTANFGSIYVGASIVANSKGILVGRDT 205
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_STAMF (Translation initiation factor 6 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif6 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 68 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQ---VVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 RL + +GV+ N+ LV S AE DV +V+T I + G L VGN NG++LP D+EL L N+L + V R + +ALGN + CN+ +A ++L+R+ I++ LGVE + + + GS +++GG++HP S ++ EL + +V TVN G I +G N+ G T P Sbjct: 5 RLSLFGNPNIGVYVFANNSIALVPPSLSSGEKKVI-AETLDV-ELVETKIANTILNGVLVVGNDNGIILPRIILDEELDILNNNLKKHDLNIYVSRSKN--TALGNILLCNNKACIAGSELERQELNKISEALGVEALYKDIMNLTIPGSLAVVTDKGGVIHPDISDDENRELKEIFKVAFERATVNSGIPFIKSGLIANNKGIIVGEYTTGP 213
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_HALLT (Translation initiation factor 6 OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=eif6 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 64/210 (30.48%), Postives = 98/210 (46.67%), Query Frame = 2 Query: 68 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 R F S VGVF++ + LV E EL P++ T++GG +G L GN+NG+L+ T++E + + +V + ++A GN + ND+ A H DL RE+ I + LGV V R + VG+ +N G L HP ++ +L + V GT+N G+ +IG+G D G DT P Sbjct: 3 RATFTGSSYVGVFARAIDDLLLVRPDVDEELADALGEEL-GAEPLL-TTVGGANTVGSLATGNENGVLVSARATEREQSRIAEAADCEV--GELPGEINAAGNVVLANDYGAYVHPDLPRESIVTIRETLGVPVVRGDLGDVRTVGTAAVANNTGVLCHPKSTESELQAVEEALDVRADLGTINYGAPLIGSGLIATDEGYVVGEDTTGP 208
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_METMJ (Translation initiation factor 6 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif6 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 63/198 (31.82%), Postives = 96/198 (48.48%), Query Frame = 2 Query: 95 VGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 +GV++++ +V G F + EL + +V T I G+ IIG L GN GL++ TD+EL L + V ++ ++A GN I ND VA H ++ + E I L V V R T+ G VG +N+G LVHP + ++ L + +P+ G+VN GS ++G G N GS T Sbjct: 13 IGVYARVFEDIAIVYPGAPAEFTAALARELD--VEIVSTFIQGSSIIGSLVSGNSQGLVVSGLATDEELA----VLSEYRDVFLLKGPMNAAGNIILANDCVAAVHPEMQIDVAEEIGSFLEVPVVRLTLGGIKTVGMAGFATNKGILVHPRANDTEIANLERIVDLPIGLGSVNMGSGLVGTGLLANSKGYVAGSVT 204 The following BLAST results are available for this feature:
BLAST of FC932346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932346 ID=FC932346; Name=FC932346; organism=Citrus clementina; type=EST; length=705bpback to top |