FC932363

Overview
NameFC932363
Unique NameFC932363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length773
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_VIBVU (Galactokinase OS=Vibrio vulnificus GN=galK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 57/162 (35.19%), Postives = 78/162 (48.15%), Query Frame = 1
Query:  160 NLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKV-LKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEL 642
            N+K+ F QV G+AP    ++PGRVNLIGEH DY    VLP AI   T+VA  K        V +   N  D++ + T      Q+       W +Y     +G  + + A+G       G DI V G VP G+GLSSSAA            F +E+ + E+
Sbjct:    7 NVKTSFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAINYQTVVAAAKREDNIVRVVSVDYGNAVDEFDI-TQAITFQQD-----KMWANYI----RGVVKCLLARGYSF---TGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEI 155          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_VIBPA (Galactokinase OS=Vibrio parahaemolyticus GN=galK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 57/162 (35.19%), Postives = 78/162 (48.15%), Query Frame = 1
Query:  160 NLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKV-LKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEL 642
            N+K+ F QV G+AP    ++PGRVNLIGEH DY    VLP AI   T+VA  K        V +   N  D++ + T      Q+       W +Y     +G  + + A+G       G DI V G VP G+GLSSSAA            F +E+ + E+
Sbjct:    7 NVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAINYQTVVAAAKREDNIVRVVSVDYGNAVDEFDI-TQAITFQQD-----KMWANYI----RGVVKCLLARGYQF---TGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEI 155          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_VIBVY (Galactokinase OS=Vibrio vulnificus (strain YJ016) GN=galK PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.615e-14
Identity = 57/162 (35.19%), Postives = 78/162 (48.15%), Query Frame = 1
Query:  160 NLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKV-LKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEL 642
            N+K+ F QV G+AP    ++PGRVNLIGEH DY    VLP AI   T+VA  K        V +   N  D++ + T      Q+       W +Y     +G  + + A+G       G DI V G VP G+GLSSSAA            F +E+ + E+
Sbjct:    7 NVKTSFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAINYQTVVAAAKREDNLVRVVSVDYGNAVDEFDI-TQAITFQQD-----KMWANYI----RGVVKCLLARGYAF---TGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEI 155          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_STRTD (Galactokinase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=galK PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14
Identity = 56/141 (39.72%), Postives = 78/141 (55.32%), Query Frame = 1
Query:  163 LKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKI--ANFSDKYSLCTYPAEPDQELDLKH-HQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAA 576
            L+ KF +VFG   D    SPGR+NLIGEH DY G +VLP+AI   T  A RK      +KVL+   ANF +K  +      P + L  ++ H W +Y     KG   +++  G  +    G+DI + G +P GSGLSSS++
Sbjct:    6 LREKFKEVFGVEADHTFFSPGRINLIGEHTDYNGGNVLPVAITLGTYGAARK----RDDKVLRFFSANFEEKGII----EVPLENLRFENEHNWTNY----PKGVLHFLQEAGHTIDS--GMDIYIYGNIPNGSGLSSSSS 132          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_STRR6 (Galactokinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=galK PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.578e-14
Identity = 58/162 (35.80%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  163 LKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKI--ANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEL 642
            L+  F+ VFG   D    SPGR+NLIGEH DY G  V P+AI   T  A RK      ++VL+   ANF DK  +    A+   E   K H W +Y     KG   +++  G  +    G D  V G +P GSGLSSSA+    + +     F +++ + +L
Sbjct:   10 LRKDFLAVFGQEVDQTFFSPGRINLIGEHTDYNGGHVFPVAISLGTYGAARK----RDDQVLRFYSANFEDKGIIEVPLADLKFE---KEHNWTNY----PKGVLHFLQEAGHVIDK--GFDFYVYGNIPNGSGLSSSASLEILTGVVAEHLFDLKLERLDL 158          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_AERHH (Galactokinase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=galK PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.578e-14
Identity = 54/159 (33.96%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  175 FIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDLKHH---QWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEL 642
            F + F   PD+  R+PGRVNLIGEH DY    VLP AI  +T VAI          +   A++ ++  L       D +  + HH   +W  Y     +G  +Y++ +G    P  GL+++V G VP G+GLSSSA+   +   A   A G+ + + E+
Sbjct:   11 FAEQFEQQPDLLVRAPGRVNLIGEHTDYNDGFVLPCAIDYETCVAIGLRDDSLVHVI--AADYGNQRDLF------DLDQPIGHHADQRWSDYI----RGVVKYLQERGY---PLRGLNLVVSGNVPQGAGLSSSASLEVAIGQAFKEALGLAITQAEI 154          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_STRSY (Galactokinase OS=Streptococcus suis (strain 05ZYH33) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13
Identity = 57/162 (35.19%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  163 LKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKI--ANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEL 642
            LK  F+ VFG   D    SPGR+NLIGEH DY G  V P AI   T  A RK      ++VL+   ANF +   L     + +  +  K   W +Y     KG  +++K  G  +    G+++ V G +P GSGLSSSA+      I     +G+E+ + +L
Sbjct:    6 LKQAFLDVFGQEADATFFSPGRINLIGEHTDYNGGHVFPAAITLGTYGAARK----RDDQVLRFYSANFEE---LGIIEVDLNNLVFDKADNWTNY----AKGVLKFLKEAGHVI--DTGMEVFVYGNIPNGSGLSSSASLELLIGIIAEELYGLELTRLDL 154          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_PROMH (Galactokinase OS=Proteus mirabilis (strain HI4320) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13
Identity = 56/167 (33.53%), Postives = 81/167 (48.50%), Query Frame = 1
Query:  145 QLRFGNLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKV-LKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEL 642
            Q    N+   F  +FG+AP  + ++PGRVNLIGEH DY    VLP AI    +VA  K        + +   N  D++SL  +P E      L +  W +Y I G   F +  K          G+DI + G VP G+GLSSSAA   +    +   + + + +KE+
Sbjct:    2 QALINNVTHSFTSIFGYAPTHFIQAPGRVNLIGEHTDYNDGFVLPCAIDYQMVVAAAKRDDNLIRVIAVDYQNAQDQFSL-EHPIE-----FLPNKMWANY-IRGVIHFLQQAKYVF------QGMDIAITGNVPQGAGLSSSAALEVAIGQTVKTLYQLPISQKEI 155          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_CHLSY (Galactokinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13
Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  163 LKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDL------KHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAA 576
            L + F Q FGH P   AR+PGRVNLIGEH DY    V PMA+ + T VA R       ++++++  FS K+         + + DL      +  QW +Y     +G  + + A+ L   P  G D+++D  VP GSGLSSSAA
Sbjct:    7 LYAAFEQYFGHPPTRIARAPGRVNLIGEHTDYNDGFVFPMALDRATYVAARP----RNDQIVRV--FSIKF-------RDEDQFDLQQIVRDERRQWVNYI----RGVAKGLLARDL---PLRGADLMIDSDVPAGSGLSSSAA 130          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_CHLAA (Galactokinase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13
Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  163 LKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDL------KHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAA 576
            L + F Q FGH P   AR+PGRVNLIGEH DY    V PMA+ + T VA R       ++++++  FS K+         + + DL      +  QW +Y     +G  + + A+ L   P  G D+++D  VP GSGLSSSAA
Sbjct:    7 LYAAFEQYFGHPPTRIARAPGRVNLIGEHTDYNDGFVFPMALDRATYVAARP----RNDQIVRV--FSIKF-------RDEDQFDLQQIVRDERRQWVNYI----RGVAKGLLARDL---PLRGADLMIDSDVPAGSGLSSSAA 130          
The following BLAST results are available for this feature:
BLAST of FC932363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
GAL1_VIBVU3.292e-1435.19Galactokinase OS=Vibrio vulnificus GN=galK PE=3 SV... [more]
GAL1_VIBPA3.292e-1435.19Galactokinase OS=Vibrio parahaemolyticus GN=galK P... [more]
GAL1_VIBVY5.615e-1435.19Galactokinase OS=Vibrio vulnificus (strain YJ016) ... [more]
GAL1_STRTD7.333e-1439.72Galactokinase OS=Streptococcus thermophilus (strai... [more]
GAL1_STRR69.578e-1435.80Galactokinase OS=Streptococcus pneumoniae (strain ... [more]
GAL1_AERHH9.578e-1433.96Galactokinase OS=Aeromonas hydrophila subsp. hydro... [more]
GAL1_STRSY1.634e-1335.19Galactokinase OS=Streptococcus suis (strain 05ZYH3... [more]
GAL1_PROMH1.634e-1333.53Galactokinase OS=Proteus mirabilis (strain HI4320)... [more]
GAL1_CHLSY1.634e-1338.19Galactokinase OS=Chloroflexus aurantiacus (strain ... [more]
GAL1_CHLAA1.634e-1338.19Galactokinase OS=Chloroflexus aurantiacus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC34207G10EF PostHarveN Citrus clementina cDNA clone C34207G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932363 ID=FC932363; Name=FC932363; organism=Citrus clementina; type=EST; length=773bp
GGTGAAGAGAATCGTATAGAGGCAATTGAGTTGAGGGAATTAAAATCAAA
ATCGGAAAAAATGGCGAGGCACGAAGAAGCACCAGTTCCTACATTGGCGT
CATTGAAGGAAGTGTACGGAGAAGGATCACAACTGGAAGAGGCTCAACTT
CGTTTCGGTAACTTGAAGTCTAAGTTCATTCAAGTCTTCGGTCACGCTCC
CGATGTGTACGCTCGATCCCCAGGAAGAGTGAACTTGATTGGGGAGCATA
TTGATTATGAAGGATATTCTGTATTGCCAATGGCAATTCGACAAGATACA
ATTGTGGCGATACGGAAGCATGTTTCAGGAGAGGCTGAAAAGGTTCTTAA
AATAGCTAATTTTAGTGACAAGTACAGTTTGTGTACTTATCCTGCTGAAC
CTGATCAGGAACTTGACTTGAAGCATCATCAATGGGGCCATTATTTCATT
TGTGGATATAAAGGTTTTTATGAATATGTGAAAGCTAAAGGATTGGATGT
TGGTCCACCAGTTGGACTTGATATTCTTGTTGATGGAATAGTTCCAACAG
GTTCTGGGCTATCCAGCTCTGCAGCATTTGTTTGCTCTTCGACCATTGCT
CTTATGGCTGCTTTTGGTGTGGAAGTCCCAAAGAAAGAATTGCGCAACTT
ACATGTGAATGCGAACGATATATTGGAGCGCAGTCTGGTGGAATGGACCA
GGCATCTCTATCATGGCCAATCTGGGTTGCAGACTGATGATTTCATCCAT
TCGTGCACTGATGTGCACTTCCT
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