FC932366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932366 vs. ExPASy Swiss-Prot
Match: AMT13_SOLLC (Ammonium transporter 1 member 3 OS=Solanum lycopersicum GN=AMT1-3 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.289e-39 Identity = 82/147 (55.78%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 217 AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 657 ++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+D SN FIG FALK P+S++DYS+FLYQW ERTQF AYL++S FLTGFVYPVV+HW WS +GW S ++T Sbjct: 12 SINAIYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSLSYYLFGFAFAFGD-SNPFIGASYFALKDIPSSSYDYSFFLYQWAFAIAVAGITSGSIAERTQFTAYLVFSFFLTGFVYPVVAHWLWSSNGWLSPNST 157
BLAST of FC932366 vs. ExPASy Swiss-Prot
Match: AMT1_CAEEL (Putative ammonium transporter 1 OS=Caenorhabditis elegans GN=amt-1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.485e-17 Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 220 VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNG---FIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 666 V+S +L A ++F MQ GFA L AG+VR+KNT NI++ N+LD G F+G F L F DY F +Q+ ER +F+ Y+ Y + ++ F+YPV++HW W+ +GW + T + Sbjct: 29 VNSFFLCSMALIIFFMQCGFAYLEAGAVRSKNTTNILIKNLLDSCICIIGYWAIGWALAYGDSGEGVNLFVGHSQFFLSGFS----DYPRFFFQYVFSATAATIVSGAVAERCEFITYVTYCTVISTFIYPVLTHWGWTENGWMAKGITSGI 176
BLAST of FC932366 vs. ExPASy Swiss-Prot
Match: AMT3_DICDI (Ammonium transporter 3 OS=Dictyostelium discoideum GN=amtC PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.921e-16 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 214 YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW 639 + +D++++L +A LVF MQ GF ML AG VRAKNT +I+L N+++ + N F+G NF L + Y+Y++ QW ER Q Y++++ T +YP V+HW WS +GW Sbjct: 22 FYMDTSWVLDAANLVFFMQAGFGMLEAGMVRAKNTKSILLKNLINTAICAISYYCVGHSFAYGKVNPNSFVGFGNFFLMDYT----HYAYWMIQWAYAATATTIATGAMAERLQLHCYILFTLVQTILIYPFVAHWIWSQNGW 160
BLAST of FC932366 vs. ExPASy Swiss-Prot
Match: AMT2_DICDI (Ammonium transporter 2 OS=Dictyostelium discoideum GN=amtB PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15 Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 187 INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXT---PSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW 639 +N + AVD ++L + YLVF MQ GF ML AG VRAKN +I++ +++D SN IG +F L ++ + S+F +QW ER + L+Y+ ++ F+YP+ +HW WS +GW Sbjct: 6 LNGTKEGLSAAVDDMWVLNATYLVFYMQAGFCMLEAGVVRAKNAKSIIMKSIIDTAIGSLLFWALGFGLAFGNADKASNPVIGTSHFFLINYQ----NLSFFAFQWAFCATSITIVSGSLAERVHVTSCLVYTIVMSAFIYPLSAHWVWSYNGW 155
BLAST of FC932366 vs. ExPASy Swiss-Prot
Match: Y108_SYNY3 (Putative ammonium transporter sll0108 OS=Synechocystis sp. (strain PCC 6803) GN=sll0108 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 45/178 (25.28%), Postives = 69/178 (38.76%), Query Frame = 1 Query: 133 NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIG---------RHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW 639 NA ++ +E +N + +++ ++L +A LV M GF ML G R KN +NI+ N++ + N F+G N+ L FP +FL+Q ER +F +LI+S L G YP+ HW W GW Sbjct: 59 NAAAIAQDTEIVNITVETVNENVATLQGTLNAIWILIAAILVIFMNAGFGMLETGLCRQKNAVNILTKNLIVFALATIAYWAIGFSLMFGSSGNPFVGFGGFFLSGDHTNYGLSPFPEGLPVAVFFLFQVAFSATAATIVSGAVAERIKFNEFLIFSVLLVGIAYPITGHWVWDAGGW 236 The following BLAST results are available for this feature:
BLAST of FC932366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932366 ID=FC932366; Name=FC932366; organism=Citrus clementina; type=EST; length=668bpback to top |