FC932372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.314e-41 Identity = 87/152 (57.24%), Postives = 109/152 (71.71%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ER RTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LV NK+D+ +K+ V + + AD GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 4.992e-41 Identity = 85/152 (55.92%), Postives = 108/152 (71.05%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRT EL+GK +KLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A + VN++LV NK+DM + K+ V S + AD I F ETSAK + NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVD-KKVVEYSVAKEFADSLNIPFLETSAKDSTNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.992e-41 Identity = 83/152 (54.61%), Postives = 109/152 (71.71%), Query Frame = 2 Query: 233 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE 688 K+LLIGDSGVGKSCLLLR KI+T+ LDGK IKLQIWDTAG+ERFRTIT++YYRGA GI+LVYD TD+ SF N++ W+ I+++A +NVNK+LV NK D+ +++ V +++ ++ A+ YGI F ETSAK NV E Sbjct: 12 KILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDL-VNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEE 162
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 6.520e-41 Identity = 87/152 (57.24%), Postives = 109/152 (71.71%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIEL+GK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ +F N+R W++ I++ A +NVNK+LV NK+D+ +K+ V + +A AD I F ETSAK + NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDL-VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.359e-38 Identity = 79/162 (48.77%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLPDI 712 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAG+ER++TIT YYR A GI LVYD++ E S+ +I W+ +++++A + V KIL+ NKAD +E KR V +GQ LA EYG+ F+ETSA TNLN+ E L ++ Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTEL 168
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.359e-38 Identity = 79/162 (48.77%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLPDI 712 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAG+ER++TIT YYR A GI LVYD++ E S+ +I W+ +++++A + V KIL+ NKAD +E KR V +GQ LA EYG+ F+ETSA TNLN+ E L ++ Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTEL 168
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.775e-38 Identity = 79/162 (48.77%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLPDI 712 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAG+ER++TIT YYR A GI LVYD++ E S+ +I W+ +++++A + V KIL+ NKAD +E KR V +GQ LA EYG+ F+ETSA TNLN+ E L ++ Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTEL 168
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.028e-38 Identity = 85/169 (50.30%), Postives = 113/169 (66.86%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHL-PDISKTADQ 730 L+K+L+IGDSGVGKSC+LLR IRTIELDGK+IKLQIWDTAG+ERF+TITT+YYRGA G+++VYD+T SFN+I+ W+ ++++ AS +V K++V NK D++ SKRAV + ADE I ETSAK + + E L DI K+ Q Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLN-SKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIKKSTPQ 200
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.028e-38 Identity = 78/162 (48.15%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLPDI 712 L +LLLIGDSGVGK+CLL R K++TI++DG ++++QIWDTAG+ER++TIT YYR A GI LVYD++ E S+ +I W+ +++++A + V KIL+ NKAD +E KR V +GQ LA EYG+ F+ETSA TNLN+ E L ++ Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTEL 168
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.811e-38 Identity = 79/162 (48.77%), Postives = 108/162 (66.67%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLPDI 712 + KLL+IG+S VGK+ L R K++T+ KR+KLQIWDTAG+ER+RTITTAYYRGAMG +L+YDVT+E SFN++++W+ I+ ++ DN ILV NK DM E +R + +G+ LAD+ G++FFETSAK N+NV L DI Sbjct: 21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDM-EDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDI 181 The following BLAST results are available for this feature:
BLAST of FC932372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932372 ID=FC932372; Name=FC932372; organism=Citrus clementina; type=EST; length=737bpback to top |