FC932385

Overview
NameFC932385
Unique NameFC932385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP415_ARATH (Pentatricopeptide repeat-containing protein At5g43790 OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.480e-37
Identity = 81/235 (34.47%), Postives = 134/235 (57.02%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQ 713
            + ++A YA N    ++ E    + M    + PN +++V++           +G   H  +L+  L     V ++L+ +Y++CG L   + VFD M +RDV  +N++I    VHG+G + I+++K +I  G+ P   +FV  + ACSH+GLV+EG  +F SM+  + + P VEHY C+VDLLGR+ +LEEA + I+ + ++P   +W S LGS + H + E  E A K  L L  +
Sbjct:  185 NTLLAAYA-NSEEIDSDEEVLLLFMRMQ-VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFE 417          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP260_ARATH (Pentatricopeptide repeat-containing protein At3g28660 OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.480e-37
Identity = 83/228 (36.40%), Postives = 130/228 (57.02%), Query Frame = 3
Query:   27 YARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILR-RGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYH-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            Y R G+  E  E+F+EM++   +  P+  ++ +            QGK IH  + + R ++S + V +ALV MYA+CG +E    VF+ + +R+V SW +LI  Y  +GY  KA      +    G+ P  +  + VL AC+H G +EEG+ + E+M   + + P  EHY+C+VDL+ RA +L++A  +IE + ++P   VWG+LL  CR H NVEL E A +  L L
Sbjct:  193 YVRCGLGSEGLEVFKEMLVRGIE--PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDL 418          

HSP 2 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 49/187 (26.20%), Postives = 90/187 (48.13%), Query Frame = 3
Query:   84 ESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLD-SILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLG 641
            E  D+ P+ +T   +            GK IH  +++ G+  S   V + ++ +Y     L   + VFD + + DVV W+ L++ Y   G G + +++FKEM+  G+ P   S  + L AC+  G + +GK + E ++K+  +   V     +VD+  +   +E A ++ E L        W +L+G
Sbjct:  108 EEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALIG 293          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP428_ARATH (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.933e-37
Identity = 84/223 (37.67%), Postives = 125/223 (56.05%), Query Frame = 3
Query:   15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERA 683
            MI  Y RN    EA +  + M+  + D+ PN  +  S              K +H  ++  G++    + SALV +YA+CG +   + VF  + + DV  WN++I+ +  HG   +AI++F EM    VSP  I+F+ +L  CSH GL+EEGK  F  M +   ++P +EHY  MVDLLGRA +++EA ++IE + IEP   +W SLL S R + N EL E A
Sbjct:  135 MIGGYVRNVQYEEALKALKNMLSFT-DIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA 356          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.525e-37
Identity = 84/240 (35.00%), Postives = 135/240 (56.25%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQCRELC 728
            + +I  +++ G    A   + EM+ +   L PN  T+ +V            G  IHG IL  G+     + +ALV MYA+CG+L+    VF +M+ +D++SW ++I  + VHG   +AIQ F++M+Y G  P  + F++VL AC ++  V+ G   F+SMR ++ + P+++HY  +VDLLGRA KL EA +++E++ I P    W +L  +C+ H     AE  S+  L L     ELC
Sbjct:  262 TTLINGFSQTGDYETAISTYFEMLEKG--LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELD---PELC 496          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP377_ARATH (Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.525e-37
Identity = 79/233 (33.91%), Postives = 131/233 (56.22%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLS 707
            + +I  Y   G   +A  +FRE +   + +    VT  S           + G  +HG  ++      + V ++L+ MYA+CG ++  Q VF+ M+  DV SWN+LIS Y  HG G +A++I   M      P+ ++F+ VL  CS+AGL+++G+  FESM ++H + P +EHY CMV LLGR+ +L++A K+IE +  EP   +W ++L +     N E A R+++  L ++
Sbjct:  418 NTVIVGYENLGEGGKAFSMFREALR--NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKIN 648          

HSP 2 Score: 93.5893 bits (231), Expect = 1.178e-18
Identity = 58/218 (26.61%), Postives = 107/218 (49.08%), Query Frame = 3
Query:    3 PGSAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656
            P S MIA + +NG   EA +LF  + M    + PN  T+ S+            G+ +HG +++ G D  + V +AL+ +YA+C K++    +F  +  ++ VSWN++I  Y   G GGKA  +F+E + + VS + ++F S LGAC+    ++ G  +     K +  +  V     ++D+  +   ++ A  +  ++        W +L+     H
Sbjct:  315 PWSFMIARFCQNGFCNEAVDLF--IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS-WNALISGYSTH 528          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.297e-37
Identity = 83/233 (35.62%), Postives = 130/233 (55.79%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNV-ELAERASKGFLSL 704
            SA++  Y +NG   +A E+FREM  E  DL        +V            GK IHG  +RRG    + V SAL+ +Y + G ++    V+  M  R++++WN+++S+   +G G +A+  F +M+  G+ P  ISF+++L AC H G+V+EG+  F  M K + ++P  EHY+CM+DLLGRA   EEA  ++E         +WG LLG C  + +   +AER +K  + L
Sbjct:  335 SALLGGYCQNGEHEKAIEIFREM--EEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMEL 561          

HSP 2 Score: 87.4261 bits (215), Expect = 8.443e-17
Identity = 61/213 (28.64%), Postives = 110/213 (51.64%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLF-ESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGS 644
            +A+++ +++N +  EA  LF  M      L P+  T  +V          +QGK IHG ++  G+ S + V S+L+ MY +CG +   + VF+ M K++ VSW++L+  Y  +G   KAI+IF+EM           F +VL AC+    V  GK +  + +R+       VE  + ++DL G++  ++ A+++   + I      W ++L +
Sbjct:  233 TAVLSAFSKNDLYEEALGLFYAM-HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE--SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.297e-37
Identity = 77/234 (32.91%), Postives = 135/234 (57.69%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRR--GLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            + +I  Y    +  EA  LF+EM+       PN VTM+S+          + G+ IH  I +R  G+ +   + ++L+ MYA+CG +E    VF+ +  + + SWN++I  + +HG    +  +F  M   G+ P  I+FV +L ACSH+G+++ G+ +F +M +++ + P +EHY CM+DLLG +   +EA ++I  + +EP   +W SLL +C++H NVEL E  ++  + +
Sbjct:  336 NTLIGGYTHMNLYKEALLLFQEMLRSGET--PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 567          

HSP 2 Score: 106.301 bits (264), Expect = 1.756e-22
Identity = 61/217 (28.11%), Postives = 116/217 (53.46%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKE-HMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656
            +AMI+ YA  G   EA ELF++M+  +  + P+  TMV+V          E G+ +H  I   G  S L +V+AL+ +Y++CG+LE    +F+ +  +DV+SWN+LI  Y       +A+ +F+EM+  G +P+ ++ +S+L AC+H G ++ G+ +   + K    V  +      ++D+  +   +E A ++   + +      W +++    +H
Sbjct:  235 NAMISGYAETGNYKEALELFKDMMKTN--VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMH 448          

HSP 3 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 60/218 (27.52%), Postives = 99/218 (45.41%), Query Frame = 3
Query:   81 MESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGY-------------------------------GGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLG 641
            M S  L PNS T   V          ++G+ IHG +L+ G D  L V ++L++MY + G+LE    VFD    RDVVS+ +LI  Y   GY                                 +A+++FK+M+   V P   + V+V+ AC+ +G +E G+ +      +H    +++    ++DL  +  +LE A  + E L  +     W +L+G
Sbjct:  125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS-WNTLIG 340          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP305_ARATH (Pentatricopeptide repeat-containing protein At4g08210 OS=Arabidopsis thaliana GN=PCMP-E100 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.297e-37
Identity = 84/233 (36.05%), Postives = 133/233 (57.08%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVEL----AERASKGF 695
            S +I    ++G    A  LFRE+I    D   +   + ++            GK IHG  +++G +S     +ALV MY +CG+++ G  +FD M +RDVVSW  +I  +G +G   +A + F +MI  G+ P+ ++F+ +L AC H+GL+EE +   E+M+ E+ + P +EHY C+VDLLG+A   +EA ++I  + +EP   +W SLL +C  H N  L    AE+  KGF
Sbjct:  412 SGLIRGCVKSGFNSLAFYLFRELIKLGLDA--DQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGF 642          

HSP 2 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 42/176 (23.86%), Postives = 92/176 (52.27%), Query Frame = 3
Query:  159 EQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMI-YHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERA 683
            ++G+ I   ++++G+   + + + +++MY     L     VFD M +R++V+W +++S Y   G   KAI++++ M+     + +   + +VL AC   G ++ G +++E + KE++ R  V     +VD+  +  +L EA    +++ + P    W +L+     +C   L + A
Sbjct:   22 KRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL-RGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISG---YCKAGLMDEA 192          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.306e-37
Identity = 82/233 (35.19%), Postives = 136/233 (58.37%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYH-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            + +I   A+NG       L++  +M+     PN +T V+V           QG+ IH   ++ G  S++ VVS+L++MY++CG L      F   +  D V W+S+IS+YG HG G +AI++F  M     +  + ++F+++L ACSH+GL ++G  LF+ M +++  +P ++HY C+VDLLGRA  L++A  II  + I+    +W +LL +C IH N E+A+R  K  L +
Sbjct:  246 NTLIMGNAQNGCPETVLYLYK--MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 476          

HSP 2 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 64/218 (29.36%), Postives = 103/218 (47.25%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDL--CPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656
            +AMIA   +     E   LFREM    H L   P+  T+ SV            G+ IHG  ++ GL+  L V S+L  MY R GKL+ G+ V   M  R++V+WN+LI     +G     + ++K M   G  P+ I+FV+VL +CS   +  +G+ +     K       V   + ++ +  +   L +AAK   + R +    +W S++ +   H
Sbjct:  145 NAMIAGLIQFEFNEEGLSLFREM----HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG-ASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMISAYGFH 356          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP378_ARATH (Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.624e-37
Identity = 77/227 (33.92%), Postives = 132/227 (58.15%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            SA+I+ Y +     EA + F+ +  ++  +  NS T  S+            G  +H   ++R L       SAL+TMY++CG L+    VF+ MD  D+V+W + IS +  +G   +A+++F++M+  G+ P+ ++F++VL ACSHAGLVE+GK   ++M +++ V P+++HY CM+D+  R+  L+EA K ++++  EP    W   L  C  H N+EL E A +
Sbjct:  355 SAIISGYCQMSQFEEAVKTFKSLRSKNASIL-NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGE 580          

HSP 2 Score: 78.9518 bits (193), Expect = 3.003e-14
Identity = 62/232 (26.72%), Postives = 106/232 (45.69%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            + MI+ YA  G+  +A  LF  M+  S D  P+S+   ++          + G+ IH  ++R GL S   + + +V MY +CG L   + VFD M  +  V+   L+  Y   G    A+++F +++  GV      F  VL AC+    +  GK +   + K  +    V     +VD   + +  E A +  +++R EP    W +++     +C +   E A K F SL
Sbjct:  153 TTMISAYAEQGILDKAVGLFSGMLA-SGDKPPSSM-YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGL-ESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISG---YCQMSQFEEAVKTFKSL 377          
The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
PP415_ARATH1.480e-3734.47Pentatricopeptide repeat-containing protein At5g43... [more]
PP260_ARATH1.480e-3736.40Pentatricopeptide repeat-containing protein At3g28... [more]
PP428_ARATH1.933e-3737.67Pentatricopeptide repeat-containing protein At5g50... [more]
PPR10_ARATH2.525e-3735.00Pentatricopeptide repeat-containing protein At1g04... [more]
PP377_ARATH2.525e-3733.91Putative pentatricopeptide repeat-containing prote... [more]
PPR8_ARATH3.297e-3735.62Pentatricopeptide repeat-containing protein At1g03... [more]
PPR21_ARATH3.297e-3732.91Pentatricopeptide repeat-containing protein At1g08... [more]
PP305_ARATH3.297e-3736.05Pentatricopeptide repeat-containing protein At4g08... [more]
PP198_ARATH4.306e-3735.19Pentatricopeptide repeat-containing protein At2g41... [more]
PP378_ARATH5.624e-3733.92Pentatricopeptide repeat-containing protein At5g13... [more]

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Properties
Property NameValue
Genbank descriptionC34208A09EF PostHarveN Citrus clementina cDNA clone C34208A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bp
GGCCGGGGAGTGCTATGATTGCTTGTTATGCTAGAAATGGGATGGCTTTT
GAGGCGTCGGAGCTTTTTCGTGAAATGATAATGGAGTCTCACGATTTATG
TCCGAATTCAGTGACTATGGTTAGTGTGCTTCAAGCTTGCGCGGCTCTTG
CTGCTTTAGAACAAGGGAAGATGATACATGGGTGCATATTAAGGAGGGGT
CTTGATTCTATTTTGCCTGTTGTAAGTGCATTGGTGACAATGTATGCGAG
ATGTGGAAAGCTTGAATTAGGTCAATGTGTTTTTGATCATATGGATAAGA
GGGATGTCGTTTCTTGGAATTCTTTAATTTCAAGCTATGGGGTTCATGGA
TATGGAGGGAAAGCAATTCAAATTTTTAAAGAGATGATTTATCATGGAGT
TTCACCGAGTCCTATATCTTTTGTTAGTGTTTTGGGAGCTTGCAGTCATG
CAGGGCTTGTTGAGGAGGGGAAGATGTTATTTGAATCTATGCGTAAAGAG
CATATGGTACGTCCTAGCGTGGAGCATTATGCTTGTATGGTAGATCTTCT
TGGTCGTGCTAATAAGTTAGAAGAAGCAGCCAAGATTATAGAAGATTTGA
GAATTGAACCGGGACCTAAGGTTTGGGGTTCATTGCTTGGATCGTGTCGG
ATTCATTGTAATGTTGAGCTTGCTGAGAGAGCAAGCAAAGGCTTTTTGAG
CTTGAGCCTACAATGCAGGGAATTATGTACTTC
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