FC932385

Overview
NameFC932385
Unique NameFC932385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP345_ARATH (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.624e-37
Identity = 83/229 (36.24%), Postives = 139/229 (60.70%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXX--EQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            +AMI+ +A+NG + EA ++F     E+    PN  T  SV            +QG+  H  +L+ GL+S   V SAL+ MYA+ G ++  + VF+ M +++   W S+IS+Y  HG     + +F +MI   V+P  ++F+SVL AC+  G+V++G  +F  M + + + PS EHY+CMVD+LGRA +L+EA +++ ++   PG  +  S+LGSCR+H NV++  + ++
Sbjct:  442 NAMISGFAQNGFSHEALKMFLSAAAET---MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAE 667          

HSP 2 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 60/185 (32.43%), Postives = 97/185 (52.43%), Query Frame = 3
Query:   48 FEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMV-RPSVEHYACMVDLLGRANKLEEAAKIIEDL 599
            FEA  +FR+M+ E  +L  + V+  SV          +  + IHG  ++RG +S+L V + L++ Y++CG LE  + VF  M +R+VVSW ++ISS         A+ IF  M + GV P+ ++FV ++ A      ++EG  +     K   V  PSV +    + L  +   LE+A K  ED+
Sbjct:  258 FEAVVIFRDMMREGVEL--DHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDI 433          

HSP 3 Score: 74.3294 bits (181), Expect = 7.397e-13
Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  165 GKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHG-YGGKAIQIFKEMIYHGVSPSPISFVSVLGACSH 449
            G  +   +++ GL+S L V ++ +TMY+R G     + VFD M  +D++SWNSL+S     G +G +A+ IF++M+  GV    +SF SV+  C H
Sbjct:  193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288          

HSP 4 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 47/191 (24.61%), Postives = 95/191 (49.74%), Query Frame = 3
Query:  102 PNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAG--LVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVE 668
            PN VT V +          ++G  IHG  ++ G  S   V ++ +T+YA+   LE  +  F+ +  R+++SWN++IS +  +G+  +A+++F         P+  +F SVL A + A    V++G+     + K  +    V   A ++D+  +   ++E+ K+  ++  +    VW S++ +   H + E
Sbjct:  370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSA-LLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFE 557          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.624e-37
Identity = 79/234 (33.76%), Postives = 135/234 (57.69%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEM-IYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESM-RKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +A+IA YA+ G+  EA E+F  +   S  + PN VT  S+          + GK  H  +LRR L     + ++L+ MY++CG L   + +FD+M +R  +SWN+++  Y  HG G + +++F+ M     V P  ++ ++VL  CSH  + + G  +F+ M   E+  +P  EHY C+VD+LGRA +++EA + I+ +  +P   V GSLLG+CR+H +V++ E   +  + +
Sbjct:  223 TAIIAGYAQLGLDEEALEMFHRL--HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEI 454          

HSP 2 Score: 92.4337 bits (228), Expect = 2.625e-18
Identity = 58/201 (28.86%), Postives = 108/201 (53.73%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYA----CMVDLLGRANKLEEAAKIIEDL 599
            +AMI+ Y++ G + EA  +F EM+    D  PN  T  +V            GK IHG I++   DS + V S+L+ MYA+ G+++  + +F+ + +RDVVS  ++I+ Y   G   +A+++F  +   G+SP+ +++ S+L A S   L++ GK         H++R  +  YA     ++D+  +   L  A ++ +++
Sbjct:  122 TAMISRYSQTGHSSEALTVFAEMMRS--DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK-----QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP189_ARATH (Pentatricopeptide repeat-containing protein At2g36980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37
Identity = 80/231 (34.63%), Postives = 123/231 (53.25%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIED----LRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            + MI  Y RNG   +A   F EM+    D   +     +V            GKMIHGC++  G      V +ALV +YA+CG ++     F  +  +D+VSWN+++ ++GVHG   +A++++  MI  G+ P  ++F+ +L  CSH+GLVEEG M+FESM K++ +   V+H  CM+D+ GR   L EA  +       +        W +LLG+C  H + EL    SK
Sbjct:  306 TTMITGYGRNGDGEQALRFFVEMMKSGVD--SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSK 534          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36
Identity = 82/236 (34.75%), Postives = 134/236 (56.78%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH-CNVELAERASKGFLSLSLQ 713
            +AMI  + + G   EA   FREM +    + P+ V +++             G  +H  +L +   + + V ++L+ +Y RCG +E  + VF +M+KR VVSWNS+I  +  +G   +++  F++M   G  P  ++F   L ACSH GLVEEG   F+ M+ ++ + P +EHY C+VDL  RA +LE+A K+++ + ++P   V GSLL +C  H  N+ LAER  K    L+++
Sbjct:  175 TAMINGFVKKGYQEEALLWFREMQISG--VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVK 408          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36
Identity = 79/227 (34.80%), Postives = 125/227 (55.07%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            ++MI  Y ++    E   LF E++       PN  T   V          E GK +HG + R G D      S+LV MY +CG +E  + V D   K D+VSW SLI     +G   +A++ F  ++  G  P  ++FV+VL AC+HAGLVE+G   F S+ ++H +  + +HY C+VDLL R+ + E+   +I ++ ++P   +W S+LG C  + N++LAE A++
Sbjct:  288 TSMIDRYFKSSRWREGFSLFSELVGSCER--PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512          

HSP 2 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 60/217 (27.65%), Postives = 102/217 (47.00%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHY----ACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSC 647
            +AM+  Y +     EA  L+  ++    +  PN  T+              +GK IHG I+R GLDS   + S+L+ MY +CG ++  + +FD + ++DVVSW S+I  Y       +   +F E++     P+  +F  VL AC+     E GK +       +M R   + Y    + +VD+  +   +E A  +++    +P    W SL+G C
Sbjct:  186 TAMVTGYVKKDQPEEALVLY-SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV-----HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP148_ARATH (Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36
Identity = 82/232 (35.34%), Postives = 131/232 (56.47%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +++I+   ++G A  A E+F +M++    L P+++T+ S+            GK +HG  LR   ++   V +AL+ MYA+CG     + VF  +      +WNS+IS Y + G   +A+  + EM   G+ P  I+F+ VL AC+H G V+EGK+ F +M KE  + P+++HYA MV LLGRA    EA  +I  + I+P   VWG+LL +C IH  +E+ E  ++    L
Sbjct:  367 NSVISGCVQSGRASTAFEVFHQMMLTG-GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFML 597          

HSP 2 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGA 440
            +A+I  Y+RNG   +A +LF  ++M      P++ T+V++           QG+ +HG   + GL+    V +AL++ Y++C +L   + +F  M  +  VSWN++I +Y   G   +AI +FK M    V  SP++ +++L A
Sbjct:   70 NALICGYSRNGYECDAWKLF--IVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 211          

HSP 3 Score: 73.1738 bits (178), Expect = 1.648e-12
Identity = 54/240 (22.50%), Postives = 109/240 (45.42%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCP--NSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKE-MIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYAC--MVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSC--------RIHCNVELAERASK 689
            +++++CYA  G    A   F +    +  LC   ++V +V +          + G  +HG  ++ GL +   VV+ L+TMY++   +E    +F+ + +  ++SWNS+IS     G    A ++F + M+  G+ P  I+  S+L  CS    +  GK L     + +      E++ C  ++D+  +     +A  + + ++  P    W S++            + C +E+ E+  K
Sbjct:  266 TSIVSCYAEKGDMDIAVVYFSK----TRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN---ENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSLSGLQHRALSCYLEMREKGLK 497          

HSP 4 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 42/161 (26.09%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  162 QGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGS 644
            Q + +   + + GLD  + V ++L+ +Y + G +   Q +FD M +RD V WN+LI  Y  +GY   A ++F  M+  G SPS  + V++L  C   G V +G+ +     K  +   S    A ++    +  +L  A  +  +++ +     W +++G+
Sbjct:   18 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNA-LISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGA 176          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36
Identity = 80/234 (34.19%), Postives = 133/234 (56.84%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGL--DSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +++I+ +++NG   EA  LF  M  ES  + PN VT+ S+            G  +H   ++ G    S + V +AL+  YA+CG  +  + +FD +++++ ++W+++I  YG  G    ++++F+EM+     P+  +F S+L AC H G+V EGK  F SM K++   PS +HY CMVD+L RA +LE+A  IIE + I+P  + +G+ L  C +H   +L E   K  L L
Sbjct:  412 NSIISGFSQNGSIHEALFLFHRMNSES--VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDL 643          

HSP 2 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 61/212 (28.77%), Postives = 108/212 (50.94%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFE-SMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLG 641
            +AMI  Y  NG   EA  LF++M  +  ++ PN VT+ SV          E G+ +HG  ++ G+     V +ALV MYA+C +    + VF+   ++D+V+WNS+IS +  +G   +A+ +F  M    V+P+ ++  S+  AC+  G +  G  L   S++   +   SV     ++D   +     ++A++I D   E     W +++G
Sbjct:  312 TAMIVGYTHNGSVNEALSLFQKM--KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT-NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD-PQSARLIFDTIEEKNTITWSAMIG 519          

HSP 3 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/152 (28.29%), Postives = 79/152 (51.97%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVE 464
            ++MIA Y +N +  E   LF  M    +++  N  T  ++           QGK  HGC+++ G++    +V++L+ MY +CG +   + VF+     D+V W ++I  Y  +G   +A+ +F++M    + P+ ++  SVL  C   GL+E
Sbjct:  211 TSMIAGYVKNDLCEEGLVLFNRM--RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIE 357          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.791e-36
Identity = 81/232 (34.91%), Postives = 130/232 (56.03%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +AMI    +     +A  LF+EM  ++ +  P+ +TM+            + G  IH  I +  L   + + ++LV MYA+CG +     VF  +  R+ +++ ++I    +HG    AI  F EMI  G++P  I+F+ +L AC H G+++ G+  F  M+    + P ++HY+ MVDLLGRA  LEEA +++E + +E    VWG+LL  CR+H NVEL E+A+K  L L
Sbjct:  358 NAMIGGSVQAKRGQDALALFQEM--QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLEL 587          

HSP 2 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 55/186 (29.57%), Postives = 96/186 (51.61%), Query Frame = 3
Query:   51 EASELFREMIMESHDLC---PNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDL 599
            E+  L+++M+   H  C   P+  T   +            G MI G +L+  L+ +  V +A + M+A CG +E  + VFD    RD+VSWN LI+ Y   G   KAI ++K M   GV P  ++ + ++ +CS  G +  GK  +E + KE+ +R ++     ++D+  +   + EA +I ++L
Sbjct:  136 ESFLLYKQMLR--HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV-KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL 318          

HSP 3 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 56/253 (22.13%), Postives = 112/253 (44.27%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGY-------------------------------GGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELA 674
            + +I  Y + G A +A  +++  +MES  + P+ VTM+ +           +GK  +  +   GL   +P+V+AL+ M+++CG +   + +FD+++KR +VSW ++IS Y   G                                G  A+ +F+EM      P  I+ +  L ACS  G ++ G  +   + K + +  +V     +VD+  +   + EA  +   ++       + +++G   +H +   A
Sbjct:  226 NCLINGYKKIGEAEKAIYVYK--LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP403_ARATH (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.646e-36
Identity = 83/236 (35.17%), Postives = 135/236 (57.20%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRR-GLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQ 713
            SA+I  YA+NG   EA ++F EM  ++  + P+   MV +          E  + +   + +R    S   VV AL+ M A+CG ++    +F+ M +RD+VS+ S++    +HG G +AI++F++M+  G+ P  ++F  +L  C  + LVEEG   FE MRK++ +  S +HY+C+V+LL R  KL+EA ++I+ +  E     WGSLLG C +H N E+AE  ++    L  Q
Sbjct:  273 SALILGYAQNGQPNEAFKVFSEMCAKN--VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQ 506          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.646e-36
Identity = 76/227 (33.48%), Postives = 126/227 (55.51%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            ++M+A Y +N    EA E+F +M  ESH L P+  T+V V           +   +H  I+ +       +  AL+ MY++CG ++    VF+ ++ + +  WN++I    +HG G  A  +  ++    + P  I+FV VL ACSH+GLV+EG + FE MR++H + P ++HY CMVD+L R+  +E A  +IE++ +EP   +W + L +C  H   E  E  +K
Sbjct:  318 NSMMAGYVQNKYHMEALEIFSDMEKESH-LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAK 543          
The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
PP345_ARATH5.624e-3736.24Pentatricopeptide repeat-containing protein At4g32... [more]
PP227_ARATH5.624e-3733.76Putative pentatricopeptide repeat-containing prote... [more]
PP189_ARATH7.345e-3734.63Pentatricopeptide repeat-containing protein At2g36... [more]
PPR13_ARATH1.636e-3634.75Pentatricopeptide repeat-containing protein At1g05... [more]
PP353_ARATH1.636e-3634.80Pentatricopeptide repeat-containing protein At4g37... [more]
PP148_ARATH1.636e-3635.34Pentatricopeptide repeat-containing protein At2g04... [more]
PP146_ARATH1.636e-3634.19Pentatricopeptide repeat-containing protein At2g03... [more]
PP169_ARATH2.791e-3634.91Pentatricopeptide repeat-containing protein At2g22... [more]
PP403_ARATH3.646e-3635.17Putative pentatricopeptide repeat-containing prote... [more]
PP202_ARATH3.646e-3633.48Pentatricopeptide repeat-containing protein At2g45... [more]

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Properties
Property NameValue
Genbank descriptionC34208A09EF PostHarveN Citrus clementina cDNA clone C34208A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bp
GGCCGGGGAGTGCTATGATTGCTTGTTATGCTAGAAATGGGATGGCTTTT
GAGGCGTCGGAGCTTTTTCGTGAAATGATAATGGAGTCTCACGATTTATG
TCCGAATTCAGTGACTATGGTTAGTGTGCTTCAAGCTTGCGCGGCTCTTG
CTGCTTTAGAACAAGGGAAGATGATACATGGGTGCATATTAAGGAGGGGT
CTTGATTCTATTTTGCCTGTTGTAAGTGCATTGGTGACAATGTATGCGAG
ATGTGGAAAGCTTGAATTAGGTCAATGTGTTTTTGATCATATGGATAAGA
GGGATGTCGTTTCTTGGAATTCTTTAATTTCAAGCTATGGGGTTCATGGA
TATGGAGGGAAAGCAATTCAAATTTTTAAAGAGATGATTTATCATGGAGT
TTCACCGAGTCCTATATCTTTTGTTAGTGTTTTGGGAGCTTGCAGTCATG
CAGGGCTTGTTGAGGAGGGGAAGATGTTATTTGAATCTATGCGTAAAGAG
CATATGGTACGTCCTAGCGTGGAGCATTATGCTTGTATGGTAGATCTTCT
TGGTCGTGCTAATAAGTTAGAAGAAGCAGCCAAGATTATAGAAGATTTGA
GAATTGAACCGGGACCTAAGGTTTGGGGTTCATTGCTTGGATCGTGTCGG
ATTCATTGTAATGTTGAGCTTGCTGAGAGAGCAAGCAAAGGCTTTTTGAG
CTTGAGCCTACAATGCAGGGAATTATGTACTTC
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