FC932385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 56/217 (25.81%), Postives = 99/217 (45.62%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMD----KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKII---EDLRIEPGPKVWGSLL 638 +++I+ YAR+GM EA EL +M + P+ T ++ E I + G + +A + MY GK +FD ++ D+V+WN+L++ +G +G + +FKEM G P +F +++ A S G E+ ++ M + V P + Y ++ L R E++ K++ ED R +P + SLL Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTK--PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 54/222 (24.32%), Postives = 110/222 (49.55%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKR----DVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLR---IEPGPKVWGSLL-GSCR 650 SA+I + + G EA +L+ EM+ S D P+ VT S+ ++ K + ++ + + + L+ + + ++E G VF M +R + V++N LI G A +IFKEM+ GV P+ +++ ++L G +E+ ++FE +++ M P++ Y M++ + +A K+E+ + +L ++P + +++ G CR Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSID--PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM-EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 45/218 (20.64%), Postives = 104/218 (47.71%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKR----DVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKI---IEDLRIEPGPKVWGSLLG 641 SA+I + + G EA EL+ EMI + + P+++T S+ + + ++ +G + + S L+ Y + +++ G +F + + + +++N+L+ + G A ++F+EM+ GV PS +++ +L G + + +FE M+K M + Y ++ + A+K+++A + + D ++P + ++G Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMI--TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 54/222 (24.32%), Postives = 107/222 (48.20%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKR----DVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLR---IEPGPKVWGSLL-GSCR 650 SA+I + + G EA +L+ EMI S D P+ T S+ ++ K + ++ + + + L+ + + ++E G +F M +R + V++N+LI G A +IFK+M+ GV P I++ +L G +E+ ++FE ++K M P + Y M++ + +A K+E+ + L ++P ++ +++ G CR Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM-EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547 The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bpback to top |