FC932385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.079e-43 Identity = 91/232 (39.22%), Postives = 136/232 (58.62%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +++I+ Y +N EA L+R M ++ + PN TM SV E GK +HG ++ G +P+ SAL TMY++CG LE G VF +DVVSWN++IS +G G +A+++F+EM+ G+ P ++FV+++ ACSH G VE G F M + + P V+HYACMVDLL RA +L+EA + IE I+ G +W LL +C+ H EL A + ++L Sbjct: 392 TSLISGYVQNSDNEEALILYRRM--KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 621 HSP 2 Score: 93.9745 bits (232), Expect = 9.021e-19 Identity = 60/210 (28.57%), Postives = 102/210 (48.57%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 S M++ YA G EA ++F + E + + +V G+ IH ++ GL + + +ALVTMY++C L +FD R+ ++W+++++ Y +G +A+++F M G+ PS + V VL ACS +EEGK L + K R A +VD+ +A L +A K + L+ E +W SL+ Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA-LVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLI 395 HSP 3 Score: 91.6633 bits (226), Expect = 4.477e-18 Identity = 55/157 (35.03%), Postives = 84/157 (53.50%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 479 SAM+ Y++NG + EA +LF M S + P+ T+V V E+GK +H +L+ G + L +ALV MYA+ G L + FD + +RDV W SLIS Y + +A+ +++ M G+ P+ + SVL ACS +E GK + Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMF--SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.252e-43 Identity = 91/233 (39.06%), Postives = 137/233 (58.80%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMD-KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +AMI Y ++G EA LFR M+ PNS T+ ++ GK IHG ++ G + V +AL+TMYA+ G + FD + +RD VSW S+I + HG+ +A+++F+ M+ G+ P I++V V AC+HAGLV +G+ F+ M+ + P++ HYACMVDL GRA L+EA + IE + IEP WGSLL +CR+H N++L + A++ L L Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQR--PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLL 612 HSP 2 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 62/241 (25.73%), Postives = 102/241 (42.32%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSW-------------------------------NSLISSYGVHGYGGKAIQIFKEMIYHG-VSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYA----CMVDLLGRANKLEEAAKIIE-----DLRIE 608 + MI Y G +A + +M+ E + P T+ +V E GK +H I++ GL + V ++L+ MYA+CG + + VFD M RD+ SW NS+IS + GY +A+ IF +M+ +SP + SVL AC++ + GK + H+V + ++ + R +E A ++IE DL+IE Sbjct: 115 TTMIVGYKNIGQYHKAIRVMGDMVKEGIE--PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI-----HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP246_ARATH (Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.859e-43 Identity = 87/228 (38.16%), Postives = 145/228 (63.60%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPG-PKVWGSLLGSCRIHCNVELAERASK 689 ++MI+ Y +NG + +FR+M+ ++ + PN+VT+ S+ + GK +HG +R+ LD + V SALV MY++ G ++ + +F +R+ V++ ++I YG HG G +AI +F M G+ P I+FV+VL ACS++GL++EG +FE MR+ + ++PS EHY C+ D+LGR ++ EA + ++ L E ++WGSLLGSC++H +ELAE S+ Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQN--IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSE 715 HSP 2 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 58/234 (24.79%), Postives = 115/234 (49.15%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMD--KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 + MI+ + +NG+ E L EM + + + +T+ ++ E GK H ++R+G+ + S L+ MY++ G + + Q +F+ +RD +WNS+IS Y +G+ K +F++M+ + P+ ++ S+L ACS G V+ GK L ++++ + +V + +VD+ +A ++ A + + +LG + + ERA FLS+ Sbjct: 388 NTMISAFVQNGLDDEGLMLVYEMQKQGFKI--DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ-NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG----YGQHGMGERAISLFLSM 613 HSP 3 Score: 79.337 bits (194), Expect = 2.299e-14 Identity = 54/211 (25.59%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDL-RIEPGPKVWGSLL 638 + MI Y +N E+ ELF E I S ++ + VT + E G+ HG + + + + +V++L+ MY+RCG + VF M +RDVVSWN++IS++ +G + + + EM G I+ ++L A S+ E GK + ++ + + Y ++D+ ++ + + K+ E E W S++ Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAI-GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.859e-43 Identity = 90/239 (37.66%), Postives = 138/239 (57.74%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGL-------DSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +A+IA Y +NG EA LF +++ +CP + ++ G H +L+ G D I V ++L+ MY +CG +E G VF M +RD VSWN++I + +GYG +A+++F+EM+ G P I+ + VL AC HAG VEEG+ F SM ++ V P +HY CMVDLLGRA LEEA +IE++ ++P +WGSLL +C++H N+ L + ++ L + Sbjct: 355 NALIAGYTQNGENEEALSLF--CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIF-VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEV 590 HSP 2 Score: 90.8929 bits (224), Expect = 7.637e-18 Identity = 56/199 (28.14%), Postives = 100/199 (50.25%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRI 605 ++M++ +A++ EA F M E L N + SV +G +H I + S + + SALV MY++CG + Q VFD M R+VVSWNSLI+ + +G +A+ +F+ M+ V P ++ SV+ AC+ ++ G+ + + K +R + VD+ + ++++EA I + + I Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVL--NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317 HSP 3 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 48/178 (26.97%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRG-LDSILPVVSALVTMYARCGKLELGQCVFDHMD-------------------------------KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACS 446 +++I C+ +NG A EA ++F +M++ES + P+ VT+ SV + G+ +HG +++ L + + + +A V MYA+C +++ + +FD M +R+VVSWN+LI+ Y +G +A+ +F + V P+ SF ++L AC+ Sbjct: 222 NSLITCFEQNGPAVEALDVF-QMMLESR-VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.170e-42 Identity = 80/209 (38.28%), Postives = 129/209 (61.72%), Query Frame = 3 Query: 81 MESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLS 707 M ++ P+ T + GK IH C+LR G +S L + +AL+ MY++CG LE VF+ M +RDVV+W +I +YG++G G KA++ F +M G+ P + F++++ ACSH+GLV+EG FE M+ + + P +EHYAC+VDLL R+ K+ +A + I+ + I+P +W S+L +CR ++E AER S+ + L+ Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 708 HSP 2 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 55/157 (35.03%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 479 +++I +++NG+ EA E + ++ + P+ T SV E G +++ IL G +S L V +ALV MY+R G L + VFD M RD+VSWNSLIS Y HGY +A++I+ E+ + P + SVL A + +V++G+ L Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKL--RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229 HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13 Identity = 54/210 (25.71%), Postives = 104/210 (49.52%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 +++I+ Y+ +G EA E++ E+ ++ + P+S T+ SV +QG+ +HG L+ G++S++ V + LV MY + + + VFD MD RD VS+N++I Y +++++F E + P ++ SVL AC H + K ++ M K V S ++D+ + + A + + + W S++ Sbjct: 176 NSLISGYSSHGYYEEALEIYHEL--KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR-NILIDVYAKCGDMITARDVFNSMECKDTVS-WNSII 380
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.528e-42 Identity = 96/238 (40.34%), Postives = 135/238 (56.72%), Query Frame = 3 Query: 3 PGSAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKR----DVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 P SA+IA +N + +A LF+ M E D+ PN T+ S+ Q IH + + G S L + LV +Y++CG LE +F+ + ++ DVV W +LIS YG+HG G A+Q+F EM+ GV+P+ I+F S L ACSH+GLVEEG LF M + + HY C+VDLLGRA +L+EA +I + EP VWG+LL +C H NV+L E A+ L Sbjct: 387 PWSAIIAGCVQNELVSDALGLFKRMRRE--DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFEL 622 HSP 2 Score: 95.9005 bits (237), Expect = 2.374e-19 Identity = 56/214 (26.17%), Postives = 106/214 (49.53%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDL-RIEPGPKVWGSLLGSC 647 + MI+ Y RNG +A +F M+ ES DL + T+VS+ E G+ +H + + L + V +ALV MY +CG+++ + VFD M++RDV++W +I+ Y G A+++ + M + GV P+ ++ S++ C A V +GK L V + ++ + + +++ ++ + GP W +++ C Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDL--DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL-HGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP--WSAIIAGC 395 HSP 3 Score: 92.0485 bits (227), Expect = 3.428e-18 Identity = 56/193 (29.02%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIE 593 +I Y R G+ +A +F M+ E P+ T V + G ++HG ILR V +AL+ MY GK+E+ + VFD M RDV+SWN++IS Y +GY A+ +F M+ V + VS+L C H +E G+ + + +E + +E +V++ + +++EA + + Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV-HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFD 277 HSP 4 Score: 67.781 bits (164), Expect = 6.923e-11 Identity = 53/219 (24.20%), Postives = 103/219 (47.03%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPK---VWGSLLGSCRIH 656 + MI Y +G A EL R +M+ + PN+VT+ S+ GK +HG +R+ + S + + ++L++MYA+C +++L VF K W+++I+ + A+ +FK M V P+ + S+L A + + + + + K + S++ +V + + LE A KI ++ + K +WG+L+ +H Sbjct: 288 TCMINGYTEDGDVENALELCR--LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM-SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP267_ARATH (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.528e-42 Identity = 90/238 (37.82%), Postives = 138/238 (57.98%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLC--PNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRK-EHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQ 713 + + +CY RN + LF +M D C P+ VT + + GK +H I GL L + + LV+MY+RCG ++ VF M +R+VVSW +LIS ++G+G +AI+ F EM+ G+SP + +L ACSH+GLV EG M F+ MR E ++P++ HY C+VDLLGRA L++A +I+ + ++P +W +LLG+CR+H +VEL ER + L + Sbjct: 183 NVLFSCYLRNKRTRDVLVLFDKM-KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAE 419
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.996e-42 Identity = 86/218 (39.45%), Postives = 135/218 (61.93%), Query Frame = 3 Query: 51 EASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 E LF+ M++ + P+ +TM ++ + G +H L+ GL + + L+ MYA+CG L + +FD MD RDVVSW++LI Y G+G +A+ +FKEM G+ P+ ++FV VL ACSH GLVEEG L+ +M+ EH + P+ EH +C+VDLL RA +L EA + I+++++EP VW +LL +C+ NV LA++A++ L + Sbjct: 456 EMLRLFKLMLVSECE--PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKI 671 HSP 2 Score: 74.7146 bits (182), Expect = 5.663e-13 Identity = 57/245 (23.27%), Postives = 108/245 (44.08%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGV-SPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVE-----LAERASKGFLSLSLQCREL 725 +++I Y++NG EA L+ +M+ E DL P+ S+ GK +H +++ S L +AL+ MY R ++ VF + +D++SW+S+I+ + G+ +A+ KEM+ GV P+ F S L ACS + G + K + ++ + D+ R L A ++ + + P W ++ + + ++ S GF+ ++ R L Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKMLQE--DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG-CSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSL 377 HSP 3 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 55/216 (25.46%), Postives = 93/216 (43.06%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656 S++IA +++ G FEA +EM+ PN S + G IHG ++ L +L MYARCG L + VFD +++ D SWN +I+ +GY +A+ +F +M G P IS S+L A + + +G + + K + + ++ + + L + ED R W ++L +C H Sbjct: 238 SSIIAGFSQLGFEFEALSHLKEMLSFGV-FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL-ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451 HSP 4 Score: 71.633 bits (174), Expect = 4.794e-12 Identity = 42/162 (25.93%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 114 TMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRK----EHMVRPSVEHYACMVDLLGRANKLEEAAKI 587 T +S+ QG+ IH IL + + +++MY +CG L + VFD M +R++VS+ S+I+ Y +G G +AI+++ +M+ + P +F S++ AC+ + V GK L + K H++ + ++ + R N++ +A+++ Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQN-----ALIAMYVRFNQMSDASRV 225
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.996e-42 Identity = 94/233 (40.34%), Postives = 135/233 (57.94%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMD-KRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +A+IA Y R G A +LFR+MI + + P T S GK IHG ++R + V+S+L+ MY++ G LE + VF D K D V WN++IS+ HG G KA+++ +MI V P+ + V +L ACSH+GLVEEG FESM +H + P EHYAC++DLLGRA +E + IE++ EP +W ++LG CRIH N EL ++A+ + L Sbjct: 280 TALIAGYVRQGSGNRALDLFRKMI--ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKL 510 HSP 2 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 52/247 (21.05%), Postives = 102/247 (41.30%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDV-------------------------------VSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656 + M+ YA++G EA ++E N + + + + HG +L G S + + +++ YA+CG++E + FD M +D+ VSW +LI+ Y G G +A+ +F++MI GV P +F S L A + + GK + M + + VRP+ + ++D+ ++ LE + ++ + W +++ + H Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKF--NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.606e-42 Identity = 88/226 (38.94%), Postives = 139/226 (61.50%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERAS 686 + MI+ Y+ NG +A E+FREM + D+ PN VT+VSV E G+ +H G+ + SAL+ MY++CG +E VF+ + + +V++W+++I+ + +HG G AI F +M GV PS ++++++L ACSH GLVEEG+ F M + P +EHY CMVDLLGR+ L+EA + I ++ I+P +W +LLG+CR+ NVE+ +R + Sbjct: 243 NTMISGYSLNGFFKDAVEVFREM--KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVA 466 HSP 2 Score: 82.0333 bits (201), Expect = 3.547e-15 Identity = 68/249 (27.31%), Postives = 106/249 (42.57%), Query Frame = 3 Query: 45 AFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLE----------------------------------------LGQC-----VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656 A A LF EM M + PN T SV ++GK IHG L+ G V+S LV MY CG ++ LG C +FD M +R VVSWN++IS Y ++G+ A+++F+EM + P+ ++ VSVL A S G +E G+ L ++ +R + ++D+ + +E+A + E L E W +++ IH Sbjct: 108 ALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL-HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIH 353 The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bpback to top |