FC932385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP116_ARATH (Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40 Identity = 90/233 (38.63%), Postives = 139/233 (59.66%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVV-SALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +++I+ YA+ + EAS L REM++ PNS+T+ S+ + GK H ILRR ++ ++LV +YA+ GK+ + V D M KRD V++ SLI YG G GG A+ +FKEM G+ P ++ V+VL ACSH+ LV EG+ LF M+ E+ +RP ++H++CMVDL GRA L +A II ++ +P W +LL +C IH N ++ + A++ L + Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQ--PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEM 580 HSP 2 Score: 83.1889 bits (204), Expect = 1.592e-15 Identity = 61/241 (25.31%), Postives = 111/241 (46.06%), Query Frame = 3 Query: 3 PGSAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQCREL 725 P + +IA YA+N + E ++ M+ S + P++ T SV G+++HG I S L V +AL++MY R + + + +FD M +RD VSWN++I+ Y G +A ++F +M + GV S I++ + G C G L MR S++ A ++ L +A +I +R+ G + IH + + + +++ +C++L Sbjct: 111 PWNVLIASYAKNELFEEVIAAYKRMV--SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN---FPTSLDPVAMIIGL--------KACSLIGAIRL-------GKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDL 331 HSP 3 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 60/243 (24.69%), Postives = 99/243 (40.74%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLC------------------------------PNS---VTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 +A+I CYA GM EA ELF +M ++ P S V M+ GK IHG + D I V + L+TMY++C L VF ++ + +WNS+IS Y +A + +EM+ G P+ I+ S+L C+ ++ GK + + + + +VD+ ++ K+ AAK + DL + + SL+ Sbjct: 214 NAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSDLMSKRDEVTYTSLI 455
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.440e-40 Identity = 83/232 (35.78%), Postives = 139/232 (59.91%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +AMI+ + NG EA F +M+ + ++CPNS T SV +G IHG +++ + + L V ++LV+MY +CG +F + + ++VS+N++IS Y +G+G KA+++F + G P+ ++F+++L AC H G V+ G F+SM+ + + P +HYACMVDLLGR+ L++A+ +I + +P VWGSLL + + H V+LAE A+K + L Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQK--EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIEL 636
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.186e-40 Identity = 82/232 (35.34%), Postives = 134/232 (57.76%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +A+IA Y ++ + +F EM+ D+ PN T+ SV +G+ +H +++ ++ + L+ +Y +CG LE VF+ + +++V +W ++I+ + HGY A +F M+ VSP+ ++F++VL AC+H GLVEEG+ LF SM+ + P +HYACMVDL GR LEEA +IE + +EP VWG+L GSC +H + EL + A+ + L Sbjct: 275 TALIAGYVQSRCFDKGMLVFEEMLKS--DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKL 504 HSP 2 Score: 96.2857 bits (238), Expect = 1.818e-19 Identity = 67/217 (30.88%), Postives = 106/217 (48.85%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRG-LDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656 +AMI + RNG A EA F EM + + N +T+VSV G+ +HG L G + + + S+LV MY +C + Q VFD M R+VV+W +LI+ Y K + +F+EM+ V+P+ + SVL AC+H G + G+ + M K + + + ++DL + LEEA + E L E W +++ H Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEM--KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMINGFAAH 385
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.161e-40 Identity = 79/200 (39.50%), Postives = 120/200 (60.00%), Query Frame = 3 Query: 84 ESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHM-DKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAER 680 ES PN T S+ G+ +HG I RRG + + + +AL+ MYA+CG + Q VF + D+R++VSW S++ YG HGYG +A+++F +M+ G+ P I F++VL AC HAGLVE+G F M E+ + P + Y C+VDLLGRA K+ EA +++E + +P WG++LG+C+ H + L R Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISR 504 HSP 2 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 44/210 (20.95%), Postives = 103/210 (49.05%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 + +I + G +++++M++E+ ++ P +T+ GK IH +++RG S LPV+++++ +Y RCG L + F M+ +D+++WN+LIS +A+ +F+ G P+ +F S++ AC++ + G+ L + + +VE ++D+ + + ++ ++ ++ W S++ Sbjct: 182 TTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF-NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387 HSP 3 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 49/198 (24.75%), Postives = 91/198 (45.96%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCG-KLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDL 599 +AMI YA + A E F EM+ + PN T+ SV G ++HG +++ G++ L V +A++ MYA C +E +F + ++ V+W +LI+ + G G ++++K+M+ +P + A + V GK + S+ K + ++ ++DL R L EA ++ Sbjct: 80 TAMITGYASSNYNARAWECFHEMVKQGTS--PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGF-QSNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR57_ARATH (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.161e-40 Identity = 84/219 (38.36%), Postives = 129/219 (58.90%), Query Frame = 3 Query: 15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVEL 671 MI+ A NG E +LF M E + C + + G+ H +L+ G DS L +AL+TMYA+CG +E + VF M D VSWN+LI++ G HG+G +A+ +++EM+ G+ P I+ ++VL ACSHAGLV++G+ F+SM + + P +HYA ++DLL R+ K +A +IE L +P ++W +LL CR+H N+EL Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS--GAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604 HSP 2 Score: 87.8113 bits (216), Expect = 6.465e-17 Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKE 500 +AMI+ Y G EA E+ R M+ +L + T SV + GK +H +LRR D ++LV++Y +CGK + + +F+ M +D+VSWN+L+S Y G+ G+A IFKEM + +S++ ++ + G EEG LF M++E Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIEL--DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCMKRE 411
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP436_ARATH (Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.161e-40 Identity = 91/224 (40.62%), Postives = 136/224 (60.71%), Query Frame = 3 Query: 33 RNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +N AF+A F++M+ +H L PNS T++++ + GK IHG + GL+ V SAL+ MY +CG + +F K+ V++NS+I Y HG KA+++F +M G ++F ++L ACSHAGL + G+ LF M+ ++ + P +EHYACMVDLLGRA KL EA ++I+ +R+EP VWG+LL +CR H N+ELA A+K L Sbjct: 268 QNEKAFDA---FKQML--THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAEL 486 HSP 2 Score: 73.9442 bits (180), Expect = 9.660e-13 Identity = 46/159 (28.93%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESM 491 MI ARNG E+ + FREM + L ++ + S+ E GKMIH +L+ +S +VS+L+ MY++ G++ + VF + ++D+V +N++IS Y + +A+ + K+M G+ P I++ +++ SH E+ + E M Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKL--DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.161e-40 Identity = 86/233 (36.91%), Postives = 139/233 (59.66%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYH-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 ++MI A++ A ++FR+M + +C + V++ + GK IHG +++ L S + S L+ MYA+CG L+ VF M ++++VSWNS+I++ G HG ++ +F EM+ G+ P I+F+ ++ +C H G V+EG F SM +++ ++P EHYAC+VDL GRA +L EA + ++ + P VWG+LLG+CR+H NVELAE AS + L Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSG--ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDL 741 HSP 2 Score: 114.005 bits (284), Expect = 8.424e-25 Identity = 61/216 (28.24%), Postives = 114/216 (52.78%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656 +AMI+ Y NG+ ++ E+FR ++ + PN +T+VS+ + G+ +HG I+++G D+ + A++ MYA+CG++ L +F+ + KRD+VSWNS+I+ AI IF++M G+ +S + L AC++ GK + M K H + V + ++D+ + L+ A + + ++ E W S++ +C H Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVK--ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621 HSP 3 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 44/146 (30.14%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACS 446 + M+ YA+ G + F M M+ + PN+VT V + G +HG ++ G+D + ++L++MY++CG+ + +F M + D V+WN +IS Y G +++ F EMI GV P I+F S+L + S Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQ--ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351 HSP 4 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 52/214 (24.30%), Postives = 104/214 (48.60%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYAC-MVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSC 647 + MI+ Y ++G+ E+ F EMI S + P+++T S+ E K IH I+R + + + SAL+ Y +C + + Q +F + DVV + ++IS Y +G ++++F+ ++ +SP+ I+ VS+L ++ G+ L + K+ + C ++D+ + ++ A +I E L + W S++ C Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMI--SSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC--NIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP128_ARATH (Pentatricopeptide repeat-containing protein At1g77170 OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.161e-40 Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLD--SILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAE 677 +A+I G A EA E+F +M + L P+ TMVSV +H C+L+ + S + ++++L+ MY +CG+++L +F+ M +R+VVSW+S+I Y +G +A++ F++M GV P+ I+FV VL AC H GLVEEGK F M+ E + P + HY C+VDLL R +L+EA K++E++ ++P VWG L+G C +VE+AE Sbjct: 187 NAIIGGLNHAGRANEAVEMFVDM--KRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409 HSP 2 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 44/205 (21.46%), Postives = 94/205 (45.85%), Query Frame = 3 Query: 27 YARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFES-MRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 Y R+ +A +++ M+ + + P+ ++ V GK +H +R G S +T+Y + G+ E + VFD +R + SWN++I G +A+++F +M G+ P + VSV +C G + L + ++ + + + ++D+ G+ +++ A+ I E++R + W S++ Sbjct: 92 YIRHESPLDAIQVYLGMVRST--VLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMI 293
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 5.435e-40 Identity = 87/230 (37.83%), Postives = 136/230 (59.13%), Query Frame = 3 Query: 15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 MI Y R G E+ E+FREM +S + P+ TMVSV E G+ I I + + + + V +AL+ MY +CG E Q VF MD+RD +W +++ +G G +AI++F +M + P I+++ VL AC+H+G+V++ + F MR +H + PS+ HY CMVD+LGRA ++EA +I+ + + P VWG+LLG+ R+H + +AE A+K L L Sbjct: 339 MIDGYLRAGCFNESLEIFREM--QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL 566 HSP 2 Score: 73.9442 bits (180), Expect = 9.660e-13 Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 165 GKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLR 602 GK +H +++ GL S L V +ALV MY+ CG +++ + VFD K DV SWN +IS Y ++I++ EM + VSP+ ++ + VL ACS + K + E + E PS+ +V+ +++ A +I ++ Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP215_ARATH (Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 5.435e-40 Identity = 80/220 (36.36%), Postives = 132/220 (60.00%), Query Frame = 3 Query: 30 ARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689 A+NG EA + F M+ ++ N V+ +V GK +H +++R V + L+ MY++CG L Q VF M KR+ VSWNS+I+++ HG+G A+++++EM V P+ ++F+S+L ACSH GL+++G+ L M++ H + P EHY C++D+LGRA L+EA I+ L ++P K+W +LLG+C H + E+ E A++ Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVS--AVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAE 550 The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bpback to top |