FC932385

Overview
NameFC932385
Unique NameFC932385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP441_ARATH (Pentatricopeptide repeat-containing protein At5g61800 OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.523e-39
Identity = 88/239 (36.82%), Postives = 141/239 (59.00%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGL--DSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPK----VWGSLLGSCRIHCNVELAERASKGFLSLS 707
            +++I+ YA+     EA +LF EM+  +  L P++V +VS           ++GK IH    R+ L  DS L   + LV  YA+CG ++    +F+    + + +WN++I+   +HG G   +  F++M+  G+ P  ++F+SVL  CSH+GLV+E + LF+ MR  + V   ++HY CM DLLGRA  +EEAA++IE +  + G +     W  LLG CRIH N+E+AE+A+    +LS
Sbjct:  218 NSLISGYAQMNHCREAIKLFDEMV--ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFL--ATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALS 452          

HSP 2 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  279 VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVEL 671
            +FD M  RD+VSWNSLIS Y    +  +AI++F EM+  G+ P  ++ VS L AC+ +G  ++GK + +  +++ +   S      +VD   +   ++ A +I E L  +     W +++    +H N EL
Sbjct:  205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG-LVDFYAKCGFIDTAMEIFE-LCSDKTLFTWNAMITGLAMHGNGEL 333          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP343_ARATH (Pentatricopeptide repeat-containing protein At4g31070, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E7 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.523e-39
Identity = 81/222 (36.49%), Postives = 137/222 (61.71%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELA 674
            S+MI+ YA  G   E   L  +M  E  +   NSVT++++               +H  IL+ G  S + + +AL+ MYA+CG L   + VF  + ++D+VSW+S+I++YG+HG+G +A++IFK MI  G     ++F+++L AC+HAGLVEE + +F    K HM   ++EHYAC ++LLGR  K+++A ++  ++ ++P  ++W SLL +C  H  +++A
Sbjct:  333 SSMISGYAETGDCSEVMNLLNQMRKEGIEA--NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHM-PVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 551          

HSP 2 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 59/235 (25.11%), Postives = 109/235 (46.38%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQ-GKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRK----EHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFL 698
            +AMI+    N       +LFR M  E+  L PN VT++SV              K IHG   R G  +   + +A +TMY RCG + L + +F+    RDVV W+S+IS Y   G   + + +  +M   G+  + ++ ++++ AC+++ L+     +   + K     H++  +      ++D+  +   L  A ++  +L  E     W S++ +  +H +   A    KG +
Sbjct:  231 TAMISGCVANQNYEMGVDLFRAMQREN--LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN-----ALIDMYAKCGSLSAAREVFYEL-TEKDLVSWSSMINAYGLHGHGSEALEIFKGMI 457          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP323_ARATH (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.601e-39
Identity = 85/241 (35.27%), Postives = 147/241 (61.00%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMI------HGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQ 713
            + MI+ YA  G   EA  LF  MI       P+ VT++S+          E GK I      +GC      D+++ + +AL+ MY++CG +   + +FD+  ++ VV+W ++I+ Y ++G   +A+++F +MI     P+ I+F++VL AC+H+G +E+G   F  M++ + + P ++HY+CMVDLLGR  KLEEA ++I ++  +P   +WG+LL +C+IH NV++AE+A++   +L  Q
Sbjct:  326 TVMISGYAEKGDMDEALALFHAMIKSGEK--PDLVTLLSLISGCGKFGSLETGKWIDARADIYGC----KRDNVM-ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQ 559          

HSP 2 Score: 78.9518 bits (193), Expect = 3.003e-14
Identity = 48/196 (24.49%), Postives = 90/196 (45.92%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIED 596
            ++M   Y+  G AF+A  L+  M+ E  +  P+  T +++           QG++IH   +  G D  +  ++  ++MY++       + +FD M  R  VSW  +IS Y   G   +A+ +F  MI  G  P  ++ +S++  C   G +E GK +          R +V     ++D+  +   + EA  I ++
Sbjct:  225 NSMFKAYSVFGEAFDAFGLYCLMLRE--EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN 418          

HSP 3 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 41/159 (25.79%), Postives = 88/159 (55.35%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDK--RDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 479
            +AM++ + ++G   +A  LFREM +  +++ P+SVT++++          +  + +H   +R G+D  + V +  ++ Y +CG L+  + VF+ +D+  R VVSWNS+  +Y V G    A  ++  M+     P   +F+++  +C +   + +G+++
Sbjct:  122 NAMLSGFCQSGHTDKAFSLFREMRL--NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.601e-39
Identity = 88/231 (38.10%), Postives = 135/231 (58.44%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLS 701
            ++M+  +++NG + EA  LF  M     ++  N VT ++V          E+GK +H  ++  GL  +    +AL+ MYA+CG L   + VF  M  R +VSW+S+I++YG+HG  G AI  F +M+  G  P+ + F++VL AC H+G VEEGK  F  M K   V P+ EH+AC +DLL R+  L+EA + I+++       VWGSL+  CRIH  +++  +A K  LS
Sbjct:  474 NSMLCGFSQNGNSVEAISLFDYMYHSYLEM--NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLF-TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDII-KAIKNDLS 699          

HSP 2 Score: 101.679 bits (252), Expect = 4.326e-21
Identity = 64/215 (29.77%), Postives = 115/215 (53.49%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFE-SMRKEHMVRPSVEHYA-CMVDLLGRANKL---EEAAKIIEDLRIEPGPKVWGSLL 638
            S +++    NG   +A  +F+ M+ +  +  P++VTM+SV             + +HG I R+  D    + ++L+TMY++CG L   + +F+ + K++ VSW ++ISSY    +  KA++ F EMI  G+ P+ ++  SVL +C   GL+ EGK +   ++R+E  + P+ E  +  +V+L     KL   E   +++ D  I      W SL+
Sbjct:  171 STLVSSCLENGEVVKALRMFKCMVDDGVE--PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE--LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI----VAWNSLI 377          

HSP 3 Score: 101.679 bits (252), Expect = 4.326e-21
Identity = 66/214 (30.84%), Postives = 107/214 (50.00%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVS-ALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEH---YACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638
            +AMI+ Y R   + +A   F EMI    +  PN VT+ SV           +GK +HG  +RR LD     +S ALV +YA CGKL   + V   +  R++V+WNSLIS Y   G   +A+ +F++M+   + P   +  S + AC +AGLV  GK +       H++R  V        ++D+  ++  ++ A+ +   ++       W S+L
Sbjct:  272 TAMISSYNRGEFSEKALRSFSEMIKSGIE--PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI-----HGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK-HRSVVTWNSML 477          

HSP 4 Score: 88.1965 bits (217), Expect = 4.950e-17
Identity = 46/161 (28.57%), Postives = 89/161 (55.28%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESM 491
            +++I+ YA  GM  +A  LFR+M+ +   + P++ T+ S             GK IHG ++R  +     V ++L+ MY++ G ++    VF+ +  R VV+WNS++  +  +G   +AI +F  M +  +  + ++F++V+ ACS  G +E+GK +   +
Sbjct:  374 NSLISLYAHRGMVIQALGLFRQMVTQR--IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL 531          

HSP 5 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 43/146 (29.45%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  165 GKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRK------EHMVRPSVEHYACMVDLLGRANKLEEAAK 584
            G  +HG I++ G+D    + ++L+ MY + G L   + VFD M  RD+V+W++L+SS   +G   KA+++FK M+  GV P  ++ +SV+  C+  G +   + +   + +      E +    +  Y+   DLL      E+ AK
Sbjct:  120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAK 265          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 89/234 (38.03%), Postives = 135/234 (57.69%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRG--LDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +++IA    N   FEA    R+M M    L PN++T+ +             GK IH  +LR G  LD  LP  +AL+ MY RCG++      F+   K+DV SWN L++ Y   G G   +++F  M+   V P  I+F+S+L  CS + +V +G M F  M +++ V P+++HYAC+VDLLGRA +L+EA K I+ + + P P VWG+LL +CRIH  ++L E +++    L
Sbjct:  468 TSIIAGLRLNNRCFEALIFLRQMKMT---LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP--NALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFEL 694          

HSP 2 Score: 83.5741 bits (205), Expect = 1.219e-15
Identity = 45/149 (30.20%), Postives = 79/149 (53.02%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAG 455
            + ++  YA+ G   EA  L+  M+     + P+  T   V           +GK +H  ++R G +  + VV+AL+TMY +CG ++  + +FD M +RD++SWN++IS Y  +G   + +++F  M    V P  ++  SV+ AC   G
Sbjct:  164 NVLVGGYAKQGYFDEAMCLYHRMLWVG-GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311          

HSP 3 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 58/218 (26.61%), Postives = 103/218 (47.25%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKV--WGSLLGSCRIH 656
            +AMI+ Y  NGM  E  ELF  M   S D  P+ +T+ SV            G+ IH  ++  G    + V ++L  MY   G     + +F  M+++D+VSW ++IS Y  +    KAI  ++ M    V P  I+  +VL AC+  G ++ G  L +   K  ++   +     ++++  +   +++A  I  ++   P   V  W S++   R++
Sbjct:  266 NAMISGYFENGMCHEGLELFFAMRGLSVD--PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNI---PRKNVISWTSIIAGLRLN 477          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 91/237 (38.40%), Postives = 141/237 (59.49%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSI-----LPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +AMI+ Y   G   EA  +F+EM        P+ VT++S+          E GK +H  IL     S       P+ +AL+ MYA+CG ++    VF  +  RD+ +WN+LI    +H   G +I++F+EM    V P+ ++F+ V+ ACSH+G V+EG+  F  MR  + + P+++HY CMVD+LGRA +LEEA   +E ++IEP   VW +LLG+C+I+ NVEL + A++  LS+
Sbjct:  244 NAMISGYVNCGYPKEALGIFKEMRDAGEH--PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM 477          

HSP 2 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 37/148 (25.00%), Postives = 76/148 (51.35%), Query Frame = 3
Query:  225 SALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML----FESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656
            + ++T   +C +++  + +FD   ++DVV+WN++IS Y   GY  +A+ IFKEM   G  P  ++ +S+L AC+  G +E GK L     E+      +      +  ++D+  +   ++ A ++   ++ +     W +L+    +H
Sbjct:  213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DRDLSTWNTLIVGLALH 359          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP259_ARATH (Putative pentatricopeptide repeat-containing protein At3g28640 OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 85/228 (37.28%), Postives = 132/228 (57.89%), Query Frame = 3
Query:   27 YARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRG-LDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYH-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            Y R G+  E  E+FREM+++   L P+  ++ +            QGK IH  + ++  ++S + V +ALV MYA+CG +E    VF  + +R+V SW +LI  Y  +GY  KA+   + +    G+ P  +  + VL AC+H G +EEG+ + E+M   + + P  EHY+C+VDL+ RA +L++A  +IE + ++P   VWG+LL  CR H NVEL E A K  L L
Sbjct:  193 YVRCGLGSEGLEVFREMLVKG--LEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDL 418          

HSP 2 Score: 78.5666 bits (192), Expect = 3.922e-14
Identity = 47/187 (25.13%), Postives = 90/187 (48.13%), Query Frame = 3
Query:   84 ESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLD-SILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLG 641
            E  D+ P+ +T   +            GK IH  +++ G+  S   V + ++ +Y     L   + VFD + + DVV W+ L++ Y   G G + +++F+EM+  G+ P   S  + L AC+  G + +GK + E ++K+  +   V     +VD+  +   +E A ++ + L        W +L+G
Sbjct:  108 EEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWAALIG 293          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 85/227 (37.44%), Postives = 131/227 (57.71%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            + +I+   +  +  EA E+F  M      +  + VTM+S+          +  K I+  I + G+   + + + LV M++RCG  E    +F+ +  RDV +W + I +  + G   +AI++F +MI  G+ P  ++FV  L ACSH GLV++GK +F SM K H V P   HY CMVDLLGRA  LEEA ++IED+ +EP   +W SLL +CR+  NVE+A  A++
Sbjct:  438 NTIISGLVQGSLFEEAIEVFCSM-QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAE 663          

HSP 2 Score: 85.1149 bits (209), Expect = 4.190e-16
Identity = 54/197 (27.41%), Postives = 100/197 (50.76%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIY-HGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIED 596
            +++I  YA +G+  EA  LF  M+  +  + P+  T                G  IHG I++ G    L V ++LV  YA CG+L+  + VFD M +R+VVSW S+I  Y    +   A+ +F  M+    V+P+ ++ V V+ AC+    +E G+ ++  +R    +  +    + +VD+  + N ++ A ++ ++
Sbjct:  103 NSLIRGYASSGLCNEAILLFLRMM--NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296          

HSP 3 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 49/155 (31.61%), Postives = 82/155 (52.90%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGK 473
            ++MI  YAR   A +A +LF  M+ +  ++ PNSVTMV V          E G+ ++  I   G++    +VSALV MY +C  +++ + +FD     ++   N++ S+Y   G   +A+ +F  M+  GV P  IS +S + +CS    +  GK
Sbjct:  204 TSMICGYARRDFAKDAVDLFFRMVRDE-EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357          

HSP 4 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 60/254 (23.62%), Postives = 106/254 (41.73%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEM--------------------------------IYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELA 674
            +AM + Y R G+  EA  +F   +M    + P+ ++M+S             GK  HG +LR G +S   + +AL+ MY +C + +    +FD M  + VV+WNS+++ Y  +G    A + F+ M                                   GV+   ++ +S+  AC H G ++  K ++  + K + ++  V     +VD+  R    E A  I   L        W + +G+  +  N E A
Sbjct:  306 NAMASNYVRQGLTREALGVFN--LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL-TNRDVSAWTAAIGAMAMAGNAERA 555          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP127_ARATH (Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.009e-39
Identity = 87/232 (37.50%), Postives = 135/232 (58.19%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            ++M   +++NG   E  E F +M     DL  + V++ SV          E G+ +       GLDS   V S+L+ +Y +CG +E G+ VFD M K D V WNS+IS Y  +G G +AI +FK+M   G+ P+ I+F+ VL AC++ GLVEEG+ LFESM+ +H   P  EH++CMVDLL RA  +EEA  ++E++  +    +W S+L  C  +    + ++A++  + L
Sbjct:  419 NSMTNGFSQNGCTVETLEYFHQM--HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL 648          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP386_ARATH (Pentatricopeptide repeat-containing protein At5g15340, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.848e-39
Identity = 95/242 (39.26%), Postives = 138/242 (57.02%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIME-SHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGL--------DSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLS 707
            + M+A Y   G   E  EL  EM+    H L  N VT+ S+            G+ +H   L++ +        D ++ V +ALV MYA+CG ++    VF  M KR+VV+WN+L S   +HG G   I +F +MI   V P  ++F +VL ACSH+G+V+EG   F S+R  + + P V+HYACMVDLLGRA  +EEA  ++ ++ + P   V GSLLGSC +H  VE+AER  +  + +S
Sbjct:  212 TVMVAGYLGAGFTREVLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVM-VGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMS 448          
The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
PP441_ARATH3.523e-3936.82Pentatricopeptide repeat-containing protein At5g61... [more]
PP343_ARATH3.523e-3936.49Pentatricopeptide repeat-containing protein At4g31... [more]
PP323_ARATH4.601e-3935.27Pentatricopeptide repeat-containing protein At4g19... [more]
PP111_ARATH4.601e-3938.10Putative pentatricopeptide repeat-containing prote... [more]
PPR45_ARATH6.009e-3938.03Pentatricopeptide repeat-containing protein At1g15... [more]
PP385_ARATH6.009e-3938.40Pentatricopeptide repeat-containing protein At5g15... [more]
PP259_ARATH6.009e-3937.28Putative pentatricopeptide repeat-containing prote... [more]
PP249_ARATH6.009e-3937.44Pentatricopeptide repeat-containing protein At3g22... [more]
PP127_ARATH6.009e-3937.50Putative pentatricopeptide repeat-containing prote... [more]
PP386_ARATH7.848e-3939.26Pentatricopeptide repeat-containing protein At5g15... [more]

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Properties
Property NameValue
Genbank descriptionC34208A09EF PostHarveN Citrus clementina cDNA clone C34208A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bp
GGCCGGGGAGTGCTATGATTGCTTGTTATGCTAGAAATGGGATGGCTTTT
GAGGCGTCGGAGCTTTTTCGTGAAATGATAATGGAGTCTCACGATTTATG
TCCGAATTCAGTGACTATGGTTAGTGTGCTTCAAGCTTGCGCGGCTCTTG
CTGCTTTAGAACAAGGGAAGATGATACATGGGTGCATATTAAGGAGGGGT
CTTGATTCTATTTTGCCTGTTGTAAGTGCATTGGTGACAATGTATGCGAG
ATGTGGAAAGCTTGAATTAGGTCAATGTGTTTTTGATCATATGGATAAGA
GGGATGTCGTTTCTTGGAATTCTTTAATTTCAAGCTATGGGGTTCATGGA
TATGGAGGGAAAGCAATTCAAATTTTTAAAGAGATGATTTATCATGGAGT
TTCACCGAGTCCTATATCTTTTGTTAGTGTTTTGGGAGCTTGCAGTCATG
CAGGGCTTGTTGAGGAGGGGAAGATGTTATTTGAATCTATGCGTAAAGAG
CATATGGTACGTCCTAGCGTGGAGCATTATGCTTGTATGGTAGATCTTCT
TGGTCGTGCTAATAAGTTAGAAGAAGCAGCCAAGATTATAGAAGATTTGA
GAATTGAACCGGGACCTAAGGTTTGGGGTTCATTGCTTGGATCGTGTCGG
ATTCATTGTAATGTTGAGCTTGCTGAGAGAGCAAGCAAAGGCTTTTTGAG
CTTGAGCCTACAATGCAGGGAATTATGTACTTC
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