FC932425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932425 vs. ExPASy Swiss-Prot
Match: DECR_HUMAN (2,4-dienoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=DECR1 PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 2.576e-15 Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 2 Query: 341 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL 712 G +I++N AAGNF+ E LSPN ++T+ DI GT + E K L K L+I+ T S + + ++++LA EWG Y +R N I PGPI ++L Sbjct: 136 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK------AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRL 252 HSP 2 Score: 46.595 bits (109), Expect = 2.576e-15 Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 3 Query: 111 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKLWNQLLSILG 344 +GKVA ITGGG+G+G ++T GA I R+ VL A + S G K + DVR + + ++L+ + G Sbjct: 58 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 136
BLAST of FC932425 vs. ExPASy Swiss-Prot
Match: DECR_MOUSE (2,4-dienoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Decr1 PE=1 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 9.547e-15 Identity = 39/124 (31.45%), Postives = 59/124 (47.58%), Query Frame = 2 Query: 341 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL 712 G D+++N AAGNF+ +E L+PNG++T+ DI GT + E K L K L I+ + S + + + ++LA EWG Y +R N I PGPI ++L Sbjct: 136 GHPDVVINNAAGNFISPSERLTPNGWKTITDIVLNGTAYVTLEIGKQLIK------AQKGAAFLAITTIYAESGSGFVMPSSSAKSGVEAMNKSLAAEWGR-YGMRFNIIQPGPIKTKGAFSRL 252 HSP 2 Score: 45.8246 bits (107), Expect = 9.547e-15 Identity = 34/111 (30.63%), Postives = 49/111 (44.14%), Query Frame = 3 Query: 15 QTQHNHKDKQQKRSDKEISKMSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKLWNQLLSILG 344 +T + KD Q + + + K L D +GKVA ITGGG+G+G ++T GA I R VL A + S G K DVR + +L+ + G Sbjct: 30 KTLYQSKDAPQSKFFQPVLKPMLPP----DAFQGKVAFITGGGTGLGKAMTTFLSTLGAQCVIASRNIDVLKATAEEISSKTGNKVHAIRCDVRDPDMVHNTVLELIKVAG 136
BLAST of FC932425 vs. ExPASy Swiss-Prot
Match: DECR_RAT (2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus GN=Decr1 PE=1 SV=2) HSP 1 Score: 55.8398 bits (133), Expect = 3.535e-14 Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 2 Query: 341 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL 712 G D+++N AAGNF+ +E LSPNG++T+ DI GT + E K L K L I+ + S + + + ++LA EWG Y +R N I PGPI ++L Sbjct: 136 GHPDVVINNAAGNFISPSERLSPNGWKTITDIVLNGTAYVTIEIGKQLIK------AQKGAAFLAITTIYAESGSGFVMPSSSAKSGVEAMNKSLAAEWGR-YGMRFNIIQPGPIKTKGAFSRL 252 HSP 2 Score: 42.743 bits (99), Expect = 3.535e-14 Identity = 27/79 (34.18%), Postives = 37/79 (46.84%), Query Frame = 3 Query: 111 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKLWNQLLSILG 344 +GKVA ITGGG+G+G ++T GA I R VL A + S G K DVR + +L+ + G Sbjct: 58 QGKVAFITGGGTGLGKAMTTFLSSLGAQCVIASRNIDVLKATAEEITSKTGNKVYAIRCDVRDPDMVHNTVLELIKVAG 136
BLAST of FC932425 vs. ExPASy Swiss-Prot
Match: YWC4_CAEEL (Uncharacterized oxidoreductase W01C9.4 OS=Caenorhabditis elegans GN=W01C9.4 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 4.605e-14 Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 2 Query: 338 FGKL-DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPI 685 FGK+ +ILVN AAGNF+++ E LS N + T++DI GTF + E K I +I+A + + + +T++LA EW + Y +R N ++PGPI Sbjct: 101 FGKVPEILVNNAAGNFIMATELLSSNAYGTIIDIVLKGTFNVTTELGK------RCIQNKTGASITSITAGYARAGAPFIVPSAVSKAGVETMTKSLATEW-SKYGLRFNAVSPGPI 210 HSP 2 Score: 41.9726 bits (97), Expect = 4.605e-14 Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 84 ESPFKAD-ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD 230 +SP D KGK+ L+TGGG+GIG I+T F A+V I RR + L+ Sbjct: 14 KSPVLRDGAFKGKLVLVTGGGTGIGKAIATTFAHLRATVVIAARRMEKLE 63 The following BLAST results are available for this feature:
BLAST of FC932425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932425 ID=FC932425; Name=FC932425; organism=Citrus clementina; type=EST; length=720bpback to top |