FC932427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: RBM38_CHICK (RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 36 SKIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRVNLA 266 +KI+VG L +HT+D SLR F FG+I +++V+ DR+TG+SRG+GFVT + N +DGR+ VNLA Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 36 SKIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRVNLA 266 +KI+VG L +HT+D SLR F FG+I +++V+ DR+TG+SRG+GFVT + N +DGR+ VNLA Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 36 SKIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRVNLA 266 +KI+VG L +HT+D SLR F FG+I +++V+ DR+TG+SRG+GFVT + N +DGR+ VNLA Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 36 SKIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRVNLA 266 +KI+VG L +HT+D SLR F FG+I +++V+ DR+TG+SRG+GFVT + N +DGR+ VNLA Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 36 SKIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRVNLA 266 +KI+VG L +HT+D SLR F FG+I +++V+ DR+TG+SRG+GFVT + N +DGR+ VNLA Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: HNRPG_MOUSE (Heterogeneous nuclear ribonucleoprotein G OS=Mus musculus GN=Rbmx PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 39 KIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRVNLA 266 K+++G L+ T++++L A FG++G IV+ I+M DRET +SRGF FVT S +N + LDG+ I+V A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: HNRGT_MACFA (RNA-binding motif protein, X-linked-like-2 OS=Macaca fascicularis GN=RBMXL2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11 Identity = 31/73 (42.47%), Postives = 48/73 (65.75%), Query Frame = 3 Query: 39 KIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRV 257 K+++G L+ T +++L A FG++G IV+ ++M DRET +SRGF FVTF S +N + LDG+ I+V Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDMNGKSLDGKAIKV 81
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: HNRGT_HUMAN (RNA-binding motif protein, X-linked-like-2 OS=Homo sapiens GN=RBMXL2 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11 Identity = 31/73 (42.47%), Postives = 48/73 (65.75%), Query Frame = 3 Query: 39 KIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRV 257 K+++G L+ T +++L A FG++G IV+ ++M DRET +SRGF FVTF S +N + LDG+ I+V Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKV 81
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: RBM38_MOUSE (RNA-binding protein 38 OS=Mus musculus GN=Rbm38 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 36 SKIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRVNLA 266 +KI+VG L +HT+D SLR F FG+I +++V+ DR+TG+SRG+GFVT + N +DGR+ VNLA Sbjct: 32 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDPN-PIIDGRKANVNLA 107
BLAST of FC932427 vs. ExPASy Swiss-Prot
Match: RBM38_HUMAN (RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 36 SKIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSXXXXXXXINALNEQDLDGRRIRVNLA 266 +KI+VG L +HT+D SLR F FG+I +++V+ DR+TG+SRG+GFVT + N +DGR+ VNLA Sbjct: 34 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 109 The following BLAST results are available for this feature:
BLAST of FC932427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932427 ID=FC932427; Name=FC932427; organism=Citrus clementina; type=EST; length=563bpback to top |