FC932434

Overview
NameFC932434
Unique NameFC932434
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15512 contig Ccv1_Contig15512:1..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 96/138 (69.57%), Postives = 115/138 (83.33%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIK 643
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRKFED  VQ DMK  P+++V+  GKP +QV+ + GE K F PEEIS+M+LTKMKE AEA+LG K++
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK-GEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQ 141          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 96/138 (69.57%), Postives = 115/138 (83.33%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIK 643
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRKFED  VQ DMK  P+++V+  GKP +QV+ + GE K F PEEIS+M+LTKMKE AEA+LG K++
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK-GEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQ 141          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 94/139 (67.63%), Postives = 117/139 (84.17%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            G  +GIDLGTT+SCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D+ VQ D+K   +K++N  GKP I+V+ R GETK FS EEIS+M+L KMKETAEA+LGKK+ D
Sbjct:    5 GPAVGIDLGTTFSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDRAVQDDIKHWAFKVINAGGKPKIEVEYR-GETKCFSAEEISSMVLLKMKETAEAYLGKKVSD 142          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 96/141 (68.09%), Postives = 113/141 (80.14%), Query Frame = 2
Query:  218 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            A   G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMKL P++++N  GKP + V  + GE K F PEEIS+M+LTKMKETAEAFLG  +
Sbjct:    2 AANKGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAGKPKVLVSYK-GEKKAFYPEEISSMVLTKMKETAEAFLGHSV 141          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 96/141 (68.09%), Postives = 113/141 (80.14%), Query Frame = 2
Query:  218 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            A   G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMKL P++++N  GKP + V  + GE K F PEEIS+M+LTKMKETAEAFLG  +
Sbjct:    2 AAAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVLVSYK-GENKAFYPEEISSMVLTKMKETAEAFLGHPV 141          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 93/143 (65.03%), Postives = 115/143 (80.42%), Query Frame = 2
Query:  212 EEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            ++    GTVIGIDLGTTYSCV V KNG  EI+AN+QGNRITPS+VAFTD ERLIG+AAKNQ A NP  TIFD+KRLIG K+ D+ VQ+D+K  P+ +VN+DGKP ++V ++ GE KVF+PEEIS MIL KMK+ AE +LG K+
Sbjct:   44 DDVENYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVK-GEKKVFTPEEISGMILGKMKQIAEDYLGTKV 185          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 101/167 (60.48%), Postives = 127/167 (76.05%), Query Frame = 2
Query:  161 VLAIVFFGGLFAISISKEE------ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            +L I+F   L   +   EE       +++GTVIGIDLGTTYSCVGV+KNG V+IIANDQGNRITPS+VAFT D ERLIG+AAKNQ   NP+ TIFDVKRLIGR F+DK VQ D+K  P+K+ N + KP+IQ    +G+ + F+PEEISAM+L+KM++ AE +LGKKI
Sbjct:    9 LLVILFSSNLLVRADGDEEDEGDKKKSEVGTVIGIDLGTTYSCVGVFKNGRVDIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTSNPENTIFDVKRLIGRTFDDKSVQHDIKFYPFKVTNANNKPHIQAATGEGD-RSFAPEEISAMVLSKMRDIAEEYLGKKI 174          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.949e-49
Identity = 93/138 (67.39%), Postives = 118/138 (85.51%), Query Frame = 2
Query:  233 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            + IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAF+D+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF+D ++Q DMK  P+ +VN  GKP I+V+ + GE K F+PEEIS+M+LTKMKETAEA+LG+ +K+
Sbjct:    3 SAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVVNDGGKPKIRVEFK-GERKTFAPEEISSMVLTKMKETAEAYLGQSVKN 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 5.157e-49
Identity = 95/134 (70.90%), Postives = 115/134 (85.82%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP +TIFD KRLIGRKF+D  VQ DMK  P+++V+ DGKP I+V  +D E K F PEEIS+M+LTKMKETAEA+LGK +
Sbjct:    7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKD-EKKTFFPEEISSMVLTKMKETAEAYLGKTV 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 5.157e-49
Identity = 95/140 (67.86%), Postives = 116/140 (82.86%), Query Frame = 2
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +   +GID GTTYSCV  + N  VEIIANDQGNR TPS+VAFTD+ERL G+AAKNQAA+NP  T+FD KRLIGRKF+D EVQ D+K  P+K+V++ GKP IQV+ + GETKVF+PEEIS+M+LTKMKETAE+FLG  +KD
Sbjct:    1 MSKAVGIDGGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLSGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQGDIKHFPFKVVDKSGKPQIQVEFK-GETKVFTPEEISSMVLTKMKETAESFLGTTVKD 139          
The following BLAST results are available for this feature:
BLAST of FC932434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_CAPHI3.023e-4969.57Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN3.023e-4969.57Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP70_ECHGR3.023e-4967.63Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HS71L_RAT3.023e-4968.09Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_MACFA3.023e-4968.09Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
GRP78_YEAST3.023e-4965.0378 kDa glucose-regulated protein homolog OS=Saccha... [more]
GRP78_APLCA3.023e-4960.4878 kDa glucose-regulated protein OS=Aplysia califo... [more]
HSP74_ANOAL3.949e-4967.39Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP7D_DROME5.157e-4970.90Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP72_PICAN5.157e-4967.86Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]

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Properties
Property NameValue
Genbank descriptionC34208E10EF PostHarveN Citrus clementina cDNA clone C34208E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932434 ID=FC932434; Name=FC932434; organism=Citrus clementina; type=EST; length=648bp
GGACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACAT
CGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAG
GGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGG
GTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTT
CAATTTCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGAT
CTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGA
AATCATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCAT
TCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCT
GTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAA
GTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGA
TTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGC
GAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAA
GATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAAGGATGC
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