FC932434

Overview
NameFC932434
Unique NameFC932434
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_NEIM0 (Chaperone protein dnaK OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +  VIGIDLGTT SC+ + +NG  ++I N +G R TPS +A+ D  E L+G  AK QA  N   TI+  KRLIG KFEDKEVQRD++  P++I+   +G  +++ Q      K  SP +ISA +L KMKE AEA+LG+K+ +
Sbjct:    1 MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLDGGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAWVKAQ-----GKELSPPQISAEVLRKMKEAAEAYLGEKVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECOUT (Chaperone protein dnaK OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLI (Chaperone protein dnaK OS=Escherichia coli (strain K12) GN=dnaK PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLC (Chaperone protein dnaK OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECOL6 (Chaperone protein dnaK OS=Escherichia coli O6 GN=dnaK PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECOL5 (Chaperone protein dnaK OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECOK1 (Chaperone protein dnaK OS=Escherichia coli O1:K1 / APEC GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECOHS (Chaperone protein dnaK OS=Escherichia coli O9:H4 (strain HS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECO57 (Chaperone protein dnaK OS=Escherichia coli O157:H7 GN=dnaK PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
[Close]
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: DNAK_ECO24 (Chaperone protein dnaK OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 2 
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ + +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTE 137
The following BLAST results are available for this feature:
BLAST of FC932434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_NEIM05.928e-2947.89Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_ECOUT5.928e-2945.07Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLI5.928e-2945.07Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLC5.928e-2945.07Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOL65.928e-2945.07Chaperone protein dnaK OS=Escherichia coli O6 GN=d... [more]
DNAK_ECOL55.928e-2945.07Chaperone protein dnaK OS=Escherichia coli O6:K15:... [more]
DNAK_ECOK15.928e-2945.07Chaperone protein dnaK OS=Escherichia coli O1:K1 /... [more]
DNAK_ECOHS5.928e-2945.07Chaperone protein dnaK OS=Escherichia coli O9:H4 (... [more]
DNAK_ECO575.928e-2945.07Chaperone protein dnaK OS=Escherichia coli O157:H7... [more]
DNAK_ECO245.928e-2945.07Chaperone protein dnaK OS=Escherichia coli O139:H2... [more]

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Properties
Property NameValue
Genbank descriptionC34208E10EF PostHarveN Citrus clementina cDNA clone C34208E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932434 ID=FC932434; Name=FC932434; organism=Citrus clementina; type=EST; length=648bp
GGACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACAT
CGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAG
GGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGG
GTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTT
CAATTTCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGAT
CTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGA
AATCATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCAT
TCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCT
GTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAA
GTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGA
TTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGC
GAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAA
GATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAAGGATGC
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