FC932434

Overview
NameFC932434
Unique NameFC932434
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I D
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESITD 138          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I D
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESITD 138          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I D
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESITD 138          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I D
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESITD 138          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I D
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESITD 138          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 90/140 (64.29%), Postives = 115/140 (82.14%), Query Frame = 2
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +   +GIDLGTTYSCVG++++  +EIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D EVQ DMK  P+K+V + GKP +QV+ + GE K F+PEEIS+M+LTKM+ETAEA+LG  + +
Sbjct:    1 MAPAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFNDAEVQADMKHFPFKVVEKSGKPIVQVEFK-GEEKQFTPEEISSMVLTKMRETAEAYLGGTVNN 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 93/139 (66.91%), Postives = 116/139 (83.45%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP+ T+FD KRLIGRKF D+ VQ DMK  P+K+V+  GKP +QV  + GE K F+PEEIS+M+L KM+E AEA+LG+K+ +
Sbjct:    6 GPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFKVVSDGGKPKVQVDYK-GENKSFNPEEISSMVLVKMREIAEAYLGQKVSN 143          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            IGIDLGTTYSCVGVY++G VEIIANDQGNR TPS+VAFTDSERLIG+ AKNQ A+NP  T+FD KRLIGRK++D ++  DMK  P+K+V+  GKP I V+ + GE+K F+PEEIS+M+LTKMKETAEA+LG+ I D
Sbjct:    4 IGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLTKMKETAEAYLGESITD 138          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 93/148 (62.84%), Postives = 117/148 (79.05%), Query Frame = 2
Query:  197 ISISKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            ++ + E+    GTVIGIDLGTTYSCV V KNG  EI+AN+QGNRITPS+V+FTD ERLIG+AAKNQAA NP  TIFD+KRLIG ++ D  VQRD+K  PY +VN+  KPY++V ++ GE K F+PEE+S MIL KMK+ AE +LGKK+
Sbjct:   40 VARAAEDHEDYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVSFTDDERLIGDAAKNQAASNPKNTIFDIKRLIGLQYNDPTVQRDIKHLPYTVVNKGNKPYVEVTVK-GEKKEFTPEEVSGMILGKMKQIAEDYLGKKV 186          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
The following BLAST results are available for this feature:
BLAST of FC932434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_DROME3.343e-4869.12Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME3.343e-4869.12Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME3.343e-4869.12Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROME3.343e-4869.12Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP71_DROME3.343e-4869.12Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_TRIRU3.343e-4864.29Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_ONCTS3.343e-4866.91Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_DROME3.343e-4869.12Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
GRP78_KLULA3.343e-4862.8478 kDa glucose-regulated protein homolog OS=Kluyve... [more]
HSP7C_SAGOE4.366e-4867.15Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]

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Properties
Property NameValue
Genbank descriptionC34208E10EF PostHarveN Citrus clementina cDNA clone C34208E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932434 ID=FC932434; Name=FC932434; organism=Citrus clementina; type=EST; length=648bp
GGACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACAT
CGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAG
GGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGG
GTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTT
CAATTTCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGAT
CTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGA
AATCATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCAT
TCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCT
GTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAA
GTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGA
TTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGC
GAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAA
GATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAAGGATGC
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