FC932434

Overview
NameFC932434
Unique NameFC932434
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 93/140 (66.43%), Postives = 113/140 (80.71%), Query Frame = 2
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +   +GIDLGTTYSCV  + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQAA+NP  T+FD KRLIGRKF+D EV  D K  P+K++++ GKP IQV+ + GETK FSPEEIS+M+LTKMKE AE +LG  +KD
Sbjct:    1 MSKAVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVINDAKHFPFKVIDKAGKPVIQVEYK-GETKTFSPEEISSMVLTKMKEIAEGYLGSTVKD 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 5.702e-48
Identity = 91/148 (61.49%), Postives = 121/148 (81.76%), Query Frame = 2
Query:  206 SKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT--DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIK 643
            ++++ TK GT+IGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+VAF+    +RLIG+AAKNQ  +NP+ TIFD KRLIGR + DK VQ D+K  P+K++++  KP ++V++   + K F+PEE+SAM+L KMKE AE++LGK++K
Sbjct:   25 TEKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGEQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVLDKSNKPSVEVKV-GADNKQFTPEEVSAMVLVKMKEIAESYLGKEVK 171          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 190.66 bits (483), Expect = 5.702e-48
Identity = 92/140 (65.71%), Postives = 114/140 (81.43%), Query Frame = 2
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +   +GIDLGTTYSCV  + N  V+IIANDQGNR TPS+VAFTD+ERLIG+AAKNQAA+NP  T+FD KRLIGR F D EVQ DMK  P+K+++ DGKP IQV+ + GETK F+PE+IS+M+L KMKETAE++LG K+ D
Sbjct:    1 MSKAVGIDLGTTYSCVAHFANDRVDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAKRLIGRNFNDPEVQADMKHFPFKLIDVDGKPQIQVEFK-GETKNFTPEQISSMVLGKMKETAESYLGAKVND 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.702e-48
Identity = 94/148 (63.51%), Postives = 120/148 (81.08%), Query Frame = 2
Query:  203 ISKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            IS  ++   G VIGIDLGTTYSCVGV+KNG VEI+ N+ GNRITPS+V+F D ER +GEAAK +A V+P +T+FDVKRLIGRKF+D+EV +D  L PY+IVN  GKP I+VQI+D +T  F+PE+ISAM+L KMKE A++FLGK +K+
Sbjct:   19 ISAVDSNIEGPVIGIDLGTTYSCVGVFKNGRVEILNNELGNRITPSYVSFVDGERKVGEAAKLEATVHPTQTVFDVKRLIGRKFDDQEVVKDRSLLPYEIVNNQGKPNIKVQIKDKDT-TFAPEQISAMVLEKMKEIAQSFLGKPVKN 165          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.447e-48
Identity = 93/139 (66.91%), Postives = 114/139 (82.01%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  TIFD KRLIGR+FED  VQ DMK  P+K+++  G+P ++V+ + GE K F PEEIS+M+L KMKE AEA+LGK I +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFKVISDGGRPRLEVEYK-GEAKNFYPEEISSMVLVKMKEIAEAYLGKSINN 141          
The following BLAST results are available for this feature:
BLAST of FC932434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_RAT4.366e-4867.15Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_MOUSE4.366e-4867.15Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN4.366e-4867.15Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE4.366e-4867.15Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_BOVIN4.366e-4867.15Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP71_CANAL4.366e-4866.43Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP7C_CAEBR5.702e-4861.49Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP71_YEAST5.702e-4865.71Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
GRP78_PLAFO5.702e-4863.5178 kDa glucose-regulated protein homolog OS=Plasmo... [more]
HSP7C_ICTPU7.447e-4866.91Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]

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Properties
Property NameValue
Genbank descriptionC34208E10EF PostHarveN Citrus clementina cDNA clone C34208E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932434 ID=FC932434; Name=FC932434; organism=Citrus clementina; type=EST; length=648bp
GGACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACAT
CGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAG
GGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGG
GTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTT
CAATTTCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGAT
CTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGA
AATCATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCAT
TCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCT
GTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAA
GTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGA
TTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGC
GAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAA
GATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAAGGATGC
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