FC932434

Overview
NameFC932434
Unique NameFC932434
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 7.447e-48
Identity = 90/136 (66.18%), Postives = 114/136 (83.82%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAF ++ERLIG+ AKNQ A+N   T+FD KRLIGRKF+DK++Q D+KL P+K++N  GKP I+V+ + GE K F+PEEIS+M+LTKM+E AE +LG K+KD
Sbjct:    7 IGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFDAKRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFK-GERKRFAPEEISSMVLTKMREIAEVYLGGKVKD 141          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.447e-48
Identity = 94/131 (71.76%), Postives = 111/131 (84.73%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 631
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTD+ERLIG++AKNQ A+NP  T+FD KRLIGRKF D EVQ D+K  P+ + ++ GKPYI+VQ R GE K FSPEEIS+MILTKMKE AE++LG
Sbjct:    5 IGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDSAKNQVAMNPHNTVFDAKRLIGRKFADAEVQSDIKHFPFTVFDKGGKPYIRVQYR-GEDKEFSPEEISSMILTKMKEVAESYLG 134          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.447e-48
Identity = 95/141 (67.38%), Postives = 115/141 (81.56%), Query Frame = 2
Query:  221 TKLGT-VIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            TKL +  +GIDLGTTYSCVGV++N  VEIIANDQGNR TPS+V FTDSERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK   + +VN++ KP  QV+ + GETK F+PEE S+MILTKMKETAEA+LG K+
Sbjct:    3 TKLDSPAVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFDDDVVQADMKHWSFTVVNKNSKPLFQVEFK-GETKTFTPEEFSSMILTKMKETAEAYLGTKV 142          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 9.726e-48
Identity = 97/140 (69.29%), Postives = 113/140 (80.71%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            G  IGIDLGTTYSCV VYK+ +VEII NDQGNR TPS+VAFTD+ERLIG+AAKNQ A NP+ TIFD KRLIGRKF+D+ VQ DMK  P+K+ N  +GKP I+V  + GE K F  EEIS+M+LTKMKE AEAFLGK +KD
Sbjct:    3 GPAIGIDLGTTYSCVAVYKDNNVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQEARNPENTIFDAKRLIGRKFDDRTVQEDMKHWPFKVTNGPNGKPNIEVTFQ-GEKKTFHAEEISSMVLTKMKEIAEAFLGKSVKD 141          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.270e-47
Identity = 90/140 (64.29%), Postives = 119/140 (85.00%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDG-KPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            G  IGIDLGTTYSCVGV+ +  VE+IANDQGNR TPS+VAFT++ERLIG++AKNQ A+NPD T+FD KRLIGR+F+D  VQ D+K  P+K++ +DG KP ++V+ + GETK+F+PEEIS+M+L KMKE AE+FLGK++K+
Sbjct:    7 GVAIGIDLGTTYSCVGVWLHDRVEVIANDQGNRTTPSYVAFTETERLIGDSAKNQVAMNPDNTVFDAKRLIGRRFQDPAVQEDVKPFPFKVICKDGDKPAVEVKYK-GETKIFAPEEISSMVLLKMKEIAESFLGKEVKN 145          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.270e-47
Identity = 96/136 (70.59%), Postives = 112/136 (82.35%), Query Frame = 2
Query:  239 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIK 643
            IGIDLGTTYSCVGV++N  V+IIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K+  + D KP I VQ R GE K F+PEEIS+M+L KMKETAEA+LGK++K
Sbjct:    7 IGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPMIAVQYR-GEEKTFTPEEISSMVLLKMKETAEAYLGKQVK 141          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 91/137 (66.42%), Postives = 113/137 (82.48%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+L KMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLAKMKEIAEAYLGKTV 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 91/137 (66.42%), Postives = 113/137 (82.48%), Query Frame = 2
Query:  230 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GE K F PEE+S+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GEAKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 89/140 (63.57%), Postives = 115/140 (82.14%), Query Frame = 2
Query:  227 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 646
            +   IGIDLGTTYSCVG++++  +EIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D EVQ DMK  P+K++++ GKP I V+ + GE K F+PEEIS+M+LTKM+ETAE++LG  + +
Sbjct:    1 MAPAIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFADPEVQSDMKHFPFKVIDKAGKPVISVEFK-GEEKQFTPEEISSMVLTKMRETAESYLGGTVNN 139          
BLAST of FC932434 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = 2
Query:  218 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 640
            ATK G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ D+K  P+++V+ +GKP ++V+ + GE K F PEEIS+M+LTKMKETAEA+LG  +
Sbjct:    2 ATK-GVAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQCDLKHWPFQVVSDEGKPKVKVEYK-GEEKSFFPEEISSMVLTKMKETAEAYLGHPV 140          
The following BLAST results are available for this feature:
BLAST of FC932434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7B_DROME7.447e-4866.18Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP71_PUCGR7.447e-4871.76Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_BLAEM7.447e-4867.38Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP70_THEPA9.726e-4869.29Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_PYRSA1.270e-4764.29Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_LEIDO1.270e-4770.59Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP7C_PONAB1.659e-4766.42Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_CRIGR1.659e-4766.42Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP72_PARBA1.659e-4763.57Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_XENLA1.659e-4766.67Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34208E10EF PostHarveN Citrus clementina cDNA clone C34208E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932434 ID=FC932434; Name=FC932434; organism=Citrus clementina; type=EST; length=648bp
GGACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACAT
CGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAG
GGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGG
GTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTT
CAATTTCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGAT
CTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGA
AATCATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCAT
TCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCT
GTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAA
GTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGA
TTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGC
GAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAA
GATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAAGGATGC
back to top