FC932439

Overview
NameFC932439
Unique NameFC932439
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30
Identity = 63/169 (37.28%), Postives = 100/169 (59.17%), Query Frame = 3
Query:  171 GKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            G   D   R I +     +++     +  + ALL + +   +  D   I  L   +  AG DTT+ T EWAM E+++NP +  KV+ E ++ +G    + E+D +RLPYLQ V+KE+FRLHP  PL+LP +++AD ++ G+ +P G+ V VN WA+ RD ++W NP+ F
Sbjct:  243 GARRDRLTRAIMEEHTLARQKSSGAKQHFVDALLTLKDQYDLSEDT--IIGLLWDMITAGMDTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVGLDRILTEADFSRLPYLQCVVKESFRLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPFEF 409          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30
Identity = 78/230 (33.91%), Postives = 123/230 (53.48%), Query Frame = 3
Query:   15 DLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-------KDMLGALLKICEDKSVE-IDINDI-KHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            D+     + A+ F +     M   G   + D  P L+ LDL G  + M     K    FD ++++ L++ +E+    S       +D + A+L + +DK +E  D++ I K   L L   G+DTT+ TL WAM  LL++P +L K++ EL   IGK   + ESDI +L YL A++KET RL+P  P   PR+ + D  + G+ +  G +++ N W I RD S+W +P  F
Sbjct:  225 DVDVENKEEAKRFLENIRDFMRLIGTFTVGDGVPFLKWLDLGGHEKEMK----KCAKKFDVMLNEWLEEHREKKGLGSEDKVVGERDFMDAMLLVLKDKPIEGFDVDTIIKATTLELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEF 450          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30
Identity = 58/121 (47.93%), Postives = 86/121 (71.07%), Query Frame = 3
Query:  315 IKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            IK + L++  AGT+T++ TLEWA++ LL +PD++SK R E++  +G    IEE+D++ LPYL+ ++ ET RLHPA PLL+P  AS D ++  + +P G  +LVN WAI RD + WD+P SF
Sbjct:  296 IKGIILIMVIAGTNTSAVTLEWALSNLLNHPDVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSF 416          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.992e-30
Identity = 77/208 (37.02%), Postives = 123/208 (59.13%), Query Frame = 3
Query:   48 EFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKG-NPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLW 659
            +FK+    +M + G   +  + P L   D + G+  R+     K  + FD+L+++ ++  ++ D  +  D +  LL    DKS   DI+   IK + L  F  GTDT+S+ +EW MTELLR+P  L K++ E+ +TI KG + + E DI  + YL+AV+KE  RLHP VPL++P +++ D  +    +P G QV+VN WA+GR+A+ W
Sbjct:  192 DFKELIDRLMRQLGTFTIGSYVPWLAWTDWVSGLEARLE----KTANDFDKLLERIVQDHEDGD-GDKTDFVDVLLAAQRDKSFGFDIDRLSIKAIVLDAFVGGTDTSSTLVEWEMTELLRHPTCLKKLQEEV-RTICKGKSSVSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATW 393          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29
Identity = 66/187 (35.29%), Postives = 112/187 (59.89%), Query Frame = 3
Query:  135 LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKICEDK----SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG--KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            + G  +++   F ++  + + +ID  LK   E    +  D++ +LL +   +    S ++ I+++K +   ++ AG DT++ T+ WAM EL++NP ++ KV+ E+   IG  +   IEE D+ +L YL+ V+KET RLHPA PLLLPR+  +  ++ G+ +P+   +LVN W+IGRD   W NP  F
Sbjct:  227 VSGHNKKLHKVFVEVDTLLNHIIDDHLKNSIEEITHDRPDIIDSLLDMIRKQEQGDSFKLTIDNLKGIIQDIYLAGVDTSAITMIWAMAELVKNPRVMKKVQDEIRTCIGIKQNEKIEEDDVDKLQYLKLVVKETLRLHPAAPLLLPRETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEF 413          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29
Identity = 73/198 (36.87%), Postives = 109/198 (55.05%), Query Frame = 3
Query:  105 DFFPVLENLDL-QGIRRRMTVYFGKMLDVFDRLIDQ-RLKQRQERDFTESKDMLGALLKICED----KSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTI-GKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            D FP L  +D+  G+ RR+     ++  +FDR++ +   +QRQE   T     LG LL+I +D    ++  I    IK +   + A GT+TTSS  EW M+EL+R P+ ++K + E+   + GK     E  + +L Y + V+KE  RLHP +PLLLPR      +V GF V  G +V+VN WA+ R    W +P  F
Sbjct:  220 DLFPSLWFVDVVTGLTRRLWTARRRLDAIFDRILAECEARQRQEEKMTGDDGFLGVLLRIRDDDGEPETGGISTTSIKAILFDMLAGGTETTSSAAEWIMSELMRKPEAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEF 417          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29
Identity = 72/202 (35.64%), Postives = 116/202 (57.43%), Query Frame = 3
Query:  102 SDFFPVLENL----DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKICEDK----SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG--KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            SDFFP          + G  +R+   F ++   F+ ++D    ++  +D     DM+ A+L + +++    S ++ ++ +K +   ++ AG DT++ TL WAM EL+RNP ++ K + E+   IG  +   I E D+ +L YL+ V+KET RLHPA PLLLPR+  AD ++ G+ +P    +LVN W+IGRD   W NP  F
Sbjct:  219 SDFFPTAGLKWFIGFVSGQHKRLYNVFNRVDTFFNHIVDDHHSKKATQD---RPDMVDAILDMIDNEQQYASFKLTVDHLKGVLSNIYHAGIDTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGRIMEEDLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEF 417          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29
Identity = 77/223 (34.53%), Postives = 117/223 (52.47%), Query Frame = 3
Query:   33 SKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF---DRLIDQRLKQRQERDFTESKDMLGALLKICEDK----SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFV 680
            SK    +++   G ME  G    SD+FPV+      GI  R+T    K   VF   D   D  +K   E D     D++  LLK+   +      +   N  K + L +  AG DT+  T+ W MT L++NP ++ K + E+ + I   + I E DI  L YL+ V+KET R++P VPLL PR+AS D ++ G+ +P    + VN WAI R+ ++W +P +F+
Sbjct:  192 SKLENTYEEVIHGTMEVLGSFAASDYFPVIG-----GIIDRITGLHNKCEKVFKGTDSFFDHCIKHHLE-DGGSKDDIVDLLLKVERGEIGLGEFQFTRNHTKGILLDILLAGVDTSGHTITWVMTHLIKNPRVMKKAQAEVREVIKNKDNITEEDIEGLEYLKMVVKETLRINPLVPLLTPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFI 408          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29
Identity = 70/212 (33.02%), Postives = 124/212 (58.49%), Query Frame = 3
Query:   36 KTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKICEDKS--VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGK-GNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLW 659
            +TA   K+    +ME   +  + D+ P L  +D + G   ++        D+ ++++ + L+  + +      D +  LL I ++K+   ++  NDIK + L +F  G  T+S+ LEW MTEL+RNP+ + K++ E+  TI   G+ I+E ++  + YL+AV+KE FR+HP +PL+LPR  + D +V G+ +  G +VL+N W+I RD ++W
Sbjct:  197 ETAGGLKKRVRQIMELLREFPIGDYVPALAWIDRINGFNSKIVEVSRAYSDLMEKVVQEHLEAGEHK-----ADFVNILLSIEKEKNNGFKVQRNDIKFMILDMFIGGISTSSTLLEWIMTELIRNPECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIW 403          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 69/197 (35.03%), Postives = 112/197 (56.85%), Query Frame = 3
Query:  102 SDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKICEDK--SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLW-DNPYSFV 680
            SD FP    LD L G+  R+   F ++      L+D+ L   + +  TES   +  L++I +D+  S++    ++K + L +   GTDT ++ + WAMT L++ P+ + K + E+   IG    + E DI  LPYL+AV+KE+ RL P +P+LL R+  AD ++ G+ +P    + VN WA+ RD + W DNP  F+
Sbjct:  217 SDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQETES--FIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRSVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFI 411          
The following BLAST results are available for this feature:
BLAST of FC932439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 474
Match NameE-valueIdentityDescription
C98A3_ARATH7.650e-3037.28Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C82A1_PEA7.650e-3033.91Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C81D1_ARATH7.650e-3047.93Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71AN_ARATH9.992e-3037.02Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH1.305e-2935.29Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.704e-2936.87Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71B4_ARATH1.704e-2935.64Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BD_ARATH2.226e-2934.53Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH2.226e-2933.02Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH3.797e-2935.03Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34208F03EF PostHarveN Citrus clementina cDNA clone C34208F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932439 ID=FC932439; Name=FC932439; organism=Citrus clementina; type=EST; length=680bp
CAATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAG
TTTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTT
GTCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGC
GTCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTG
ATTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAA
AGATATGTTAGGTGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGA
TTGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGG
ACTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCG
CAACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTG
GCAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTA
CAAGCAGTGCTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTT
ACTTCCCCGTAAAGCCTCAGCAGATACAGAAGTTGCTGGATTCATGGTGC
CAAATGGTGCACAAGTCTTAGTCAACACATGGGCTATAGGAAGAGATGCT
AGCTTATGGGACAACCCATACTCTTTTGTT
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