FC932442

Overview
NameFC932442
Unique NameFC932442
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15263 contig Ccv1_Contig15263:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.071e-53
Identity = 114/232 (49.14%), Postives = 153/232 (65.95%), Query Frame = 2
Query:   35 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            M S  E Q+     +  +EE+   AMQLA   VLPM  +AAI+L + EI+AKAG    LS  +IA+QL  +N  AP+MLDRML LL S+ +L  S+ +      ERLYGL PV K+   N++GVS+     +  DKV +ESW  L+DAV+EGGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M++ILE Y+GF+ +  +VDVGGG G  L+MI SKYP IK INF
Sbjct:    1 MGSTGETQMTP--TQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINF 230          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.069e-53
Identity = 112/232 (48.28%), Postives = 154/232 (66.38%), Query Frame = 2
Query:   35 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            M S  E Q+     +  +EE+   AMQLA   VLPM  +AAI+L + EI+AKAG    LS  ++A+QL  +N +AP+MLDRML LL S+ +L  S+ +      ERLYGL PV K+   N+DGVS+     +  DKV +ESW  L+DAV++GGIPFN+ +GM  F+Y   +P FN+ ++K M +HSTI M++ILE Y+GF+ +  +VDVGGG G  ++MI SKYP IK INF
Sbjct:    1 MGSTGETQMTP--TQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINF 230          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 110/218 (50.46%), Postives = 143/218 (65.60%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKA------GKLSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSV-----SSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +EE+   AMQLA   VLPM  +AAI+L V EI+AK+        +S  EIAAQL   N  AP+MLDR+L LL S+ V+ CS+        ERLYGL PV K+   N+DGVSL     +  DKV MESW  L+DA+++GGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M++I E Y GF+ +  +VDVGGG G  LSMI +KYP IK INF
Sbjct:   18 DEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINF 235          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.446e-52
Identity = 103/215 (47.91%), Postives = 146/215 (67.91%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            E+E++  AMQLA   VLPM  +A ++L + EI+AK+G    +S  E+AAQL  +N +AP+MLDRM  LL ++ VL C++ +      ERLY L PV K+   N DGVS+   + +  DKV MESW  L DAV++GG+PFN+ +GM  FEY   +P FN+ ++  M +H+T++M++ILE Y GF+ +  +VDVGGG G T++MI SKYP IK INF
Sbjct:   12 EDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINF 226          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.677e-52
Identity = 112/229 (48.91%), Postives = 151/229 (65.94%), Query Frame = 2
Query:   47 SEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKA----GKLSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVL-----ECSVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +EIQ+   ++   +EE+   AMQLA   VLPMA +AAI+L V EI+AK+    G +S  EIAAQL   N +AP+MLDR+L LL S+ V+     E      ERLYGL PV K+   N+DGVSL  F+    DKV +E W  L+DA++EGGIPFN+ +GM+ F+Y   +  FN+ ++K M ++STI M++ILE Y GF+ +  +VDVGGG G   SMI +KYP I AINF
Sbjct:    7 AEIQIIPTHSS--DEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINF 233          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.677e-52
Identity = 104/208 (50.00%), Postives = 143/208 (68.75%), Query Frame = 2
Query:  107 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSV-----SSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            AMQLA   VLP    AAI+L + EI+A+AG    L+  E+A+QL  QN  AP+MLDR+  LL S+ VL C++        ERLYGL P+ K+ V N+DGVSL     +  D+VF+ESW  ++DA++EGGIPF++ HGM  F+Y   +P FN+ +++AM +HSTI M++ILE Y GF+ ++ +VDVGGG G  L+MI +KYP IK INF
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINF 212          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.499e-51
Identity = 106/214 (49.53%), Postives = 141/214 (65.89%), Query Frame = 2
Query:   89 EESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSV-----SSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +E  + AMQL    VLPM  + AI+L + EI+AKAG    LS  +IA+ L  +N  AP+MLDR+L LL S+ +L CS+        ERLYGL  V K+   N+DGVS+     +  DKV MESW  L+DA++EGGIPFN+ +GM  FEY   +P FN+ ++K M +HS +AM++ILE Y+GF+ +  LVDVGGG G  +S I SKYP IK INF
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINF 229          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.385e-50
Identity = 102/203 (50.25%), Postives = 136/203 (67.00%), Query Frame = 2
Query:  107 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGKLSAP-EIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS--GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            AMQLA   VLPM  ++AI+L + EII       +P EIA+ L   N  AP M+DR+L LL  + V+ CSV S   +R+YGL PV KY   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M+++ + Y+GFQ +  LVDVGGG G TL+MI SKYP I+ INF
Sbjct:    4 AMQLACASVLPMVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINF 206          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.385e-50
Identity = 102/203 (50.25%), Postives = 136/203 (67.00%), Query Frame = 2
Query:  107 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGKLSAP-EIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS--GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            AMQLA   VLPM  ++AI+L + EII       +P EIA+ L   N  AP M+DR+L LL  + V+ CSV S   +R+YGL PV KY   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M+++ + Y+GFQ +  LVDVGGG G TL+MI SKYP I+ INF
Sbjct:    4 AMQLASASVLPMVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINF 206          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.601e-49
Identity = 101/217 (46.54%), Postives = 144/217 (66.36%), Query Frame = 2
Query:   83 EEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG---KLSAPEIAAQL-QAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            ++++++  AMQLA   VLPM  + AI+L + E IAKAG    +S+ E+ AQL +  N +AP+M+DR+  LL S+ VL C++        ER YGL PV K+ + N  GVSL   + +  DKV MESW  L+D V++GGIPFN+ +GM  FEY   +  FN+ ++  MFNHST+ M++I+E Y GF  ++ LVDVGGG G +L+MITSK+  +K INF
Sbjct:    5 QDDQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSLKGINF 221          
The following BLAST results are available for this feature:
BLAST of FC932442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_PRUDU4.071e-5349.14Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH9.069e-5348.28Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CLABR1.547e-5250.46Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_CAPCH3.446e-5247.91Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
IEMT_CLABR7.677e-5248.91(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_EUCGL7.677e-5250.00Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT3_POPKI6.499e-5149.53Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
OMT2_CHRAE9.385e-5050.25Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE9.385e-5050.25Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_ZINEL1.601e-4946.54Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]

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Properties
Property NameValue
Genbank descriptionC34208F06EF PostHarveN Citrus clementina cDNA clone C34208F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932442 ID=FC932442; Name=FC932442; organism=Citrus clementina; type=EST; length=706bp
GACAAAAGGAGGGAAAAAAAAACTATAAGAAACAATGCGTTCGTTGTCGG
AAATACAGTTACCCAAACAGAATAATAAATATGAAGAAGAAGAGAGCTAT
TCACATGCCATGCAGCTAGCAATGGGCGTAGTGCTGCCCATGGCAACCCA
GGCAGCTATTCAGCTTGGCGTTTTTGAAATCATAGCCAAAGCTGGCAAAC
TCTCGGCTCCAGAGATTGCAGCACAGTTACAAGCGCAAAACGTAAAAGCA
CCAATGATGCTAGACAGAATGCTCTGGCTTCTGGTCAGCCACCGTGTGCT
TGAGTGCTCTGTTTCTAGTGGCGAGAGGCTATATGGTCTCACCCCCGTGT
CCAAATATTTTGTTAGTAATAAAGATGGTGTTTCGTTGGGTCACTTTATG
GCCTTGCCTCTCGACAAGGTCTTCATGGAGAGTTGGTTGGGATTGAGAGA
TGCAGTTATGGAGGGAGGAATACCATTCAATAGGGTGCATGGAATGCACA
TCTTTGAGTACGCTTCCGGAAACCCCGGGTTTAATGAAACTTATCACAAG
GCAATGTTCAACCACTCAACCATAGCCATGGAGAGAATCCTGGAACATTA
CGAGGGCTTTCAGAACGTTGAGCGACTCGTCGATGTTGGAGGAGGCTTTG
GTGTCACCCTCAGTATGATTACTTCCAAATATCCCCAAATTAAGGCGATT
AACTTT
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