FC932442

Overview
NameFC932442
Unique NameFC932442
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.091e-49
Identity = 104/214 (48.60%), Postives = 139/214 (64.95%), Query Frame = 2
Query:   89 EESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSV-----SSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +E  + A+QL    VLPM  + AI+L + EI+AKAG    L   +IA+ L  +N  AP+MLDR+L LL S+ +L CS+        ERLYGL  V K+   N+DGVS+     +  DKV MESW  L+DA++EGGIPFN+ +GM  FEY   +P FN+ ++K M  HS +AM++ILE Y+GF+ +  LVDVGGG G  +S I SKYP IK INF
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINF 229          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.268e-46
Identity = 102/217 (47.00%), Postives = 137/217 (63.13%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEII---AKAGKLSAPE-IAAQLQAQ--NVKAPMMLDRMLWLLVSHRVLECSVSSG----ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +EE+  +AMQLA   +LPM  + A++LG+ E++   A AGK  APE + A+L     N  A  M+DRML LL S+ V++C +       ER Y   PV K+   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN  +++ M NHS I  +++LE Y GF+ V  LVDVGGG G TL  ITS +PQIK INF
Sbjct:   13 DEEACMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINF 229          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.090e-45
Identity = 92/215 (42.79%), Postives = 135/215 (62.79%), Query Frame = 2
Query:   83 EEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSSGE----RLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            ++E+    A+ LA     PM  ++A +L + +I +KAG+   +S  EIA+Q+ A+N  AP++LDRML LL SH VL C +  GE    R+YG  P+  Y  SN    SLG  + L  DKV MESW  L D ++EGG+PF R HGM  F+Y   +  FN  +++ M +H+ + M+++L++Y GF +V+ LVDVGG  GV +SMI +K+  IK IN+
Sbjct:   17 KDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINY 231          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.988e-43
Identity = 95/219 (43.38%), Postives = 133/219 (60.73%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAK---AGK--LSAPEIAAQLQA---QNVKAPMMLDRMLWLLVSHRVLECSVSSG----ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +EE+  +AMQLA   +LPM  + AI+LG+ E++ K    GK  L+  E+ A++ A       A  M+DRML LL S+ V+ C +       ER Y   PV K+   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +  FN  +++ M NHS I  +++L+ Y GF+ V  LVDVGGG G TL  ITS++P I  +NF
Sbjct:   13 DEEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNF 231          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.040e-40
Identity = 89/222 (40.09%), Postives = 132/222 (59.46%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEII---------AKAGKLSAPEIAAQLQAQ-NVKAPMMLDRMLWLLVSHRVLECSVSSG-----ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +EE+  +A+QLA   +LPM  + AI+LG+ E +          KA  L+  E+A +L ++ N  A  M+DRML LL S+ V+ C +  G      R Y   PV K+   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +  FN  +++ M NHS I  +++L+ Y GF     +VDVGGG G T++ + S++P I+ IN+
Sbjct:   13 DEEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINY 234          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.169e-38
Identity = 86/212 (40.57%), Postives = 135/212 (63.68%), Query Frame = 2
Query:   83 EEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG---KLSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGG-IPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +E  +Y   + L+  + LPMA +AAI+L VFEII++AG   +LS  +I A++  +N  A + LDR+L +L +  +L  S +   R+YGL   S+  V+++D VS+   +    DK  +ES+  ++D V+E G IPF+R HGM  F+YA      N+++++AM   STIA + + + Y+GF N++ LVDVGGG G +LS I +K+P I+ INF
Sbjct:   34 QEGVNYLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTTKSGRVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINF 245          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 84/219 (38.36%), Postives = 120/219 (54.79%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK----LSAPEIAAQLQA--QNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIP-FNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            E+ +   AM L   +V P    AAI L +FEIIAKA      +S  EIA++L A  Q+   P  LDRML LL S+ VL  +  +      ER+YGL+ V KY V ++    L  F         ++ W+  ++AV++  I  F  VHG+  +E+   +   N+ ++K+M +     M+R+LE Y GF+ +  LVDVGGG G  L +I SKYP IK INF
Sbjct:   21 EDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINF 239          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17
Identity = 61/209 (29.19%), Postives = 104/209 (49.76%), Query Frame = 2
Query:   77 KYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG-KLSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVM-EGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEG-FQNVERLVDVGGGFGVTLSMITSKYPQIK 694
            K +   S +       G    +  + A+QL +  II  +G  ++  E++++L +Q V    +  R++  LV  ++   +   GE  YGL P +KY V   D   +G  +A+  DK FM  W  L+D +  E G  F +  G +I+ Y + +P  N+ +++AM N S + M  +++     F  +  LVDVGGG G  +  I + +P IK
Sbjct:    4 KKDNLSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALY-RVMRYLVHMKLFTKASIDGELRYGLAPPAKYLVKGWDKCMVGSILAIT-DKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIK 210          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16
Identity = 52/208 (25.00%), Postives = 103/208 (49.52%), Query Frame = 2
Query:   92 ESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK-LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILE-HYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            ++ +H  ++  G    +  + A++LG+ +II    + ++  ++A++L   +V    +  R+L  LV   +L    S  G++ Y L P++     N     +   + +   K FM  W  ++D + + G  F +  GM I+EY  G+P  ++ +++ M   + +    ++    + FQ ++ LVDVGGG G T+  I+  +P IK   F
Sbjct:   13 KAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLY-RILRYLVKMEILRVEKSDDGQKKYALEPIATLLSRNAKRSMVPMILGMT-QKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLF 218          
The following BLAST results are available for this feature:
BLAST of FC932442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT2_POPTM2.091e-4948.60Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_SACOF1.268e-4647.00Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IMT1_MESCR9.090e-4542.79Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE4.988e-4343.38Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ1.040e-4040.09Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA2.169e-3840.57(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA3.708e-3038.36Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
6OMT_COPJA2.756e-1729.19(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA3.980e-1625.003'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]

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Properties
Property NameValue
Genbank descriptionC34208F06EF PostHarveN Citrus clementina cDNA clone C34208F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932442 ID=FC932442; Name=FC932442; organism=Citrus clementina; type=EST; length=706bp
GACAAAAGGAGGGAAAAAAAAACTATAAGAAACAATGCGTTCGTTGTCGG
AAATACAGTTACCCAAACAGAATAATAAATATGAAGAAGAAGAGAGCTAT
TCACATGCCATGCAGCTAGCAATGGGCGTAGTGCTGCCCATGGCAACCCA
GGCAGCTATTCAGCTTGGCGTTTTTGAAATCATAGCCAAAGCTGGCAAAC
TCTCGGCTCCAGAGATTGCAGCACAGTTACAAGCGCAAAACGTAAAAGCA
CCAATGATGCTAGACAGAATGCTCTGGCTTCTGGTCAGCCACCGTGTGCT
TGAGTGCTCTGTTTCTAGTGGCGAGAGGCTATATGGTCTCACCCCCGTGT
CCAAATATTTTGTTAGTAATAAAGATGGTGTTTCGTTGGGTCACTTTATG
GCCTTGCCTCTCGACAAGGTCTTCATGGAGAGTTGGTTGGGATTGAGAGA
TGCAGTTATGGAGGGAGGAATACCATTCAATAGGGTGCATGGAATGCACA
TCTTTGAGTACGCTTCCGGAAACCCCGGGTTTAATGAAACTTATCACAAG
GCAATGTTCAACCACTCAACCATAGCCATGGAGAGAATCCTGGAACATTA
CGAGGGCTTTCAGAACGTTGAGCGACTCGTCGATGTTGGAGGAGGCTTTG
GTGTCACCCTCAGTATGATTACTTCCAAATATCCCCAAATTAAGGCGATT
AACTTT
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