FC932445

Overview
NameFC932445
Unique NameFC932445
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_HUMAN (60S ribosomal protein L15 OS=Homo sapiens GN=RPL15 PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.164e-70
Identity = 124/191 (64.92%), Postives = 148/191 (77.49%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQLK+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKAIRR+    WI  PVHKHRE RGLT+ G+KSRG+ KGH++++T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_BOVIN (60S ribosomal protein L15 OS=Bos taurus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 263.462 bits (672), Expect = 8.164e-70
Identity = 124/191 (64.92%), Postives = 148/191 (77.49%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQLK+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKAIRR+    WI  PVHKHRE RGLT+ G+KSRG+ KGH++++T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15A_PICMA (60S ribosomal protein L15-1 OS=Picea mariana GN=SB61 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.393e-69
Identity = 126/191 (65.97%), Postives = 142/191 (74.35%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI-NKGHRYNNTKAGRRHTWKRQNTQSYWRYR 572
            KQSDV+RFL RVRCWE  QL  I R +RPSRPDKARRLGYKAKQGYV+Y           PV KG  YGKP N G+ QLK+QR+L+S AEER GR+   LRVLNSYWINQDSTYKYYE+ILVD  H AIR+D RINWICN VHKHRE RGLT+ GKK RG+  +GH Y+  +  +R TWKR NT S  RYR
Sbjct:   14 KQSDVMRFLQRVRCWEFRQLPGIVRVTRPSRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYWINQDSTYKYYEIILVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSKRATWKRNNTLSLRRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_ANGJA (60S ribosomal protein L15 OS=Anguilla japonica GN=rpl15 PE=2 SV=3)

HSP 1 Score: 261.151 bits (666), Expect = 4.052e-69
Identity = 123/191 (64.40%), Postives = 146/191 (76.44%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+ +HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQ+K+ R+L+STAEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKA+RRD    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSGLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRDPDAQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_SINKN (60S ribosomal protein L15 OS=Siniperca kneri GN=rpl15 PE=2 SV=3)

HSP 1 Score: 258.84 bits (660), Expect = 2.011e-68
Identity = 122/191 (63.87%), Postives = 146/191 (76.44%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+ +HRA RP+RPDKARRLGYKAKQGYV+Y           PV KGATYGKP +HGVNQ+K+ R+L+STAEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKA+RR+    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  WKR+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWKRRNTLQLRRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 258.455 bits (659), Expect = 2.626e-68
Identity = 122/191 (63.87%), Postives = 143/191 (74.87%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+R+LLRVRCW+  QL  +HRA RPSRPDKARRLGYKAKQG++IY           PV KG TYGKP +HGVNQLK  R L+S AEERVGRR   LRVLNSYW+ QD+ +KYYEVI VDP H A+RRD ++NW+CN VHKHRE RGLT+ GK SRG+ KG+RY+ T  G RR  W+R+N     RYR
Sbjct:   14 KQSDVLRYLLRVRCWQYRQLTKLHRAPRPSRPDKARRLGYKAKQGFLIYRIRVRRGGRKRPVHKGCTYGKPKSHGVNQLKPYRNLQSVAEERVGRRMGGLRVLNSYWVAQDAAFKYYEVICVDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGVGKGYRYSQTIGGSRRAAWRRKNRLHLRRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_SILME (60S ribosomal protein L15 OS=Silurus meridionalis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 3.430e-68
Identity = 123/191 (64.40%), Postives = 146/191 (76.44%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQLK+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+D  HKAIRR+  + WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDMQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_MONAL (60S ribosomal protein L15 OS=Monopterus albus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 3.430e-68
Identity = 123/191 (64.40%), Postives = 145/191 (75.92%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+ +HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQ+K+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKAIRR+    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  WKR+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_CYPCA (60S ribosomal protein L15 OS=Cyprinus carpio GN=rpl15 PE=2 SV=3)

HSP 1 Score: 257.684 bits (657), Expect = 4.480e-68
Identity = 122/191 (63.87%), Postives = 145/191 (75.92%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQ+K+ R+L+S AEER GR    LRVL+SYW+ +DSTYK++EV+L+D  HKAIRRD    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  WKR+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLIDTFHKAIRRDPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_ICTPU (60S ribosomal protein L15 OS=Ictalurus punctatus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 256.914 bits (655), Expect = 7.642e-68
Identity = 123/191 (64.40%), Postives = 145/191 (75.92%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQLK+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+D  HKAIRR+    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAPWRRRNTLQLRRYR 204          
The following BLAST results are available for this feature:
BLAST of FC932445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_HUMAN8.164e-7064.9260S ribosomal protein L15 OS=Homo sapiens GN=RPL15... [more]
RL15_BOVIN8.164e-7064.9260S ribosomal protein L15 OS=Bos taurus GN=RPL15 P... [more]
RL15A_PICMA1.393e-6965.9760S ribosomal protein L15-1 OS=Picea mariana GN=SB... [more]
RL15_ANGJA4.052e-6964.4060S ribosomal protein L15 OS=Anguilla japonica GN=... [more]
RL15_SINKN2.011e-6863.8760S ribosomal protein L15 OS=Siniperca kneri GN=rp... [more]
RL15_CHITE2.626e-6863.8760S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15_SILME3.430e-6864.4060S ribosomal protein L15 OS=Silurus meridionalis ... [more]
RL15_MONAL3.430e-6864.4060S ribosomal protein L15 OS=Monopterus albus GN=r... [more]
RL15_CYPCA4.480e-6863.8760S ribosomal protein L15 OS=Cyprinus carpio GN=rp... [more]
RL15_ICTPU7.642e-6864.4060S ribosomal protein L15 OS=Ictalurus punctatus G... [more]

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Properties
Property NameValue
Genbank descriptionC34208F09EF PostHarveN Citrus clementina cDNA clone C34208F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932445 ID=FC932445; Name=FC932445; organism=Citrus clementina; type=EST; length=709bp
AGAAGCAGTCCGATGTGATTCGCTTCCTGCTGCGCGTCCGATGCTGGGAG
CTCCACCAGCTGAACGCCATCCACCGTGCCTCGCGTCCCTCGCGCCCCGA
CAAGGCCCGTCGTCTCGGTTACAAGGCCAAGCAGGGTTACGTTATCTACC
GTGCCCGTGTCCGCCGCGGTGGCCGCAAACGCCCTGTCTCCAAGGGTGCC
ACCTACGGCAAGCCCACCAACCACGGTGTCAACCAGCTCAAGTACCAGCG
TGCTCTCAAGTCCACCGCTGAGGAGCGTGTTGGCCGTCGCGCTGCTAACT
TGCGCGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCTACAAGTAC
TACGAGGTCATCCTTGTCGACCCCCAGCACAAGGCCATCCGCCGTGATGC
CCGCATCAACTGGATCTGCAACCCCGTTCACAAGCACCGCGAGTCCCGTG
GCCTCACCGCCACTGGCAAGAAGTCCCGTGGTATCAACAAGGGTCACCGT
TACAACAACACCAAGGCTGGTCGCCGCCACACCTGGAAGCGCCAGAACAC
CCAGAGCTACTGGCGTTACCGTTAAGTGCGGTAGTGCACTTTCACAGTGG
TTTCGGCTGGATCATGTTGGCTACGGCATGTGGTCATTTATTCAGGCACT
TTCCCAGACAGTGTTATCCACGCTGGGCTCAACTTTAATGCAGACCAGCC
GGTTCTGTT
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